Podospora pseudocomata: QC762_109460
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Entry
QC762_109460 CDS
T09797
Symbol
TOP1
Name
(RefSeq) DNA topoisomerase 1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ppsd
Podospora pseudocomata
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsd03032
]
QC762_109460 (TOP1)
Enzymes [BR:
ppsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QC762_109460 (TOP1)
DNA replication proteins [BR:
ppsd03032
]
Eukaryotic type
DNA Topoisomerases
QC762_109460 (TOP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
PcRGLX_1st
TubZ_C_2
Motif
Other DBs
NCBI-GeneID:
87905276
NCBI-ProteinID:
XP_062748326
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Position
1
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AA seq
909 aa
AA seq
DB search
MASDSSDDDRPLAGTNGHKSAPKISPATDRKMDKLASRARPAPPNVSIRNGPVEDNAMDI
DTTPNGGPKRKARSSVGQTVSYKDESDSDDGAPLLTISQAKRQKSKHKQEDSDSDDEPIA
RKKNGARLPPSIKNTAMVDSSDDDQPLGTKIAQRKAAIEKSAGKKKPAAKKAIKDESDDE
PLAKPKKRQSNGVSAAKKTNGVKKEESDSDSDAPIAKKVKKEAPAKAKVKAAAAPAKKGR
LVKEESVVNSAADEEEEEEYRWWDAPKKEDDSIKWTTLEHNGVLFPPAYEPLPKDVKLIY
DGTPVNLHVDAEEVATFFGAMLHSTQNVENPTFQKNFFKDFRDVLKETGGAKDQNGKLVD
IKEFAKLDFTKIFEYYKGLSEAKKARPAAEKKAEKAEKDKFEAPYMYCKWDGRKEKVGNF
RVEPPGLFRGRGEHPKTGTVKKRVMPEQVTINIGKEAKVPDPPAGHKWKAVQHDNKATWL
AMWQENVNGNYKYVMLAANSTVKGQADYKKFEKARELNKHIARIRADYTAELKSEIMAER
QRATAMYLIDKFALRAGNEKDTENEAETVGCCSLKFEHVTLREPNTVIFDFLGKDSIRFY
NEFTVERQVFKNLKLFKKPPKADGDDIFDRLTTSQLNKHLSNYMPGLTAKVFRTYNASHT
MSTLLQSLSVENRTMAEKIKLYNDCNREVAVICNHKRTVGAAHEAQMEKLADRIKGLKYQ
KWRTKMMMLDLDPKLKKKKGAEYFALDEDITQEWLLEHQKFLVEEQRTKIQKKFEKDNEK
RVADGEAELDEKELKERLRVAAELEAKYKKENKTKKVEAEGKGPAVEKLEAAVSKFDDRI
KTLELQCADREGNKEVALGTSKINYIDPRLTVVFAKKFNVPIEKFFSKTLRDKFKWAIES
VGDDDTWEF
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgacagttctgacgatgacaggcctttggcaggcacgaacggtcacaagtcc
gctcccaagatctcaccagccaccgaccgcaagatggataaactcgcttccagggcccgt
ccggcgcccccgaacgtctcgattcgcaacggccctgtggaagacaacgcgatggacatc
gacaccacacccaacggaggccccaagcggaaagcgcgcagctctgttggtcagacggtc
agttacaaggacgagtcggacagtgacgatggcgcaccactgcttaccatctcccaggcc
aagcgtcaaaagtccaaacacaagcaagaagactccgatagtgacgatgagccaattgca
agaaagaagaatggcgccaggttgcctccttccatcaagaacaccgccatggttgattcc
tccgatgatgaccagcctctaggaaccaagattgctcagaggaaggcggcgattgagaag
tctgctggcaagaagaagccggctgcgaagaaggcgatcaaagacgagtcggatgacgag
ccgctggctaagcccaagaagcgtcaatcaaatggtgtctcggccgcgaaaaagaccaac
ggcgtcaagaaggaggagtcggattcggattcggatgcccccatcgccaagaaggtgaag
aaggaggctcctgccaaagccaaggtcaaggccgctgctgctcctgccaaaaagggcagg
ttggtcaaggaggaatcggtggtcaacagtgctgctgatgaagaggaagaggaggagtat
cggtggtgggacgcgccaaagaaggaggacgattccatcaagtggaccaccttggagcac
aatggtgtcctcttcccgcccgcctacgagcctctccccaaggatgtcaagctcatatac
gacggcacgccggtcaatttgcatgtggatgccgaggaggtggcgacatttttcggtgcg
atgcttcattccacccagaacgtcgagaatcccaccttccagaagaacttctttaaagat
ttcagggatgttctcaaggagaccggtggtgccaaagaccagaatggcaagcttgttgat
atcaaagagttcgccaagctcgacttcaccaagatctttgagtactacaagggtctcagc
gaagcgaaaaaggctcgcccggctgctgagaagaaggcggaaaaggctgagaaggacaag
ttcgaggcgccctacatgtactgcaagtgggatggccggaaagaaaaggtgggcaacttc
cgcgtcgaaccgcctggacttttccgtggccgtggtgagcatcccaaaaccggcactgtc
aagaagcgtgtcatgcctgagcaagtcacgatcaacatcggcaaggaggccaaggtccca
gatccgccggccggacacaagtggaaggctgtgcaacacgataacaaggcgacatggctc
gccatgtggcaggaaaacgtcaacggcaactacaagtatgtgatgctggctgccaacagt
accgtcaagggccaagccgactacaagaagtttgagaaggctcgcgagctcaacaagcat
attgcgaggatccgagccgactataccgctgagctcaagtccgagattatggctgaacga
caacgcgccaccgccatgtatctcattgacaagtttgcgctcagagctggcaatgagaag
gacaccgagaacgaggccgagacggtaggctgctgttcgctcaagttcgaacacgttacg
ctcagggagcccaacacggttatttttgacttcctgggcaaggacagtatccgcttctac
aacgagttcacggtggaacggcaggtcttcaagaacttgaagctgttcaagaagcctcca
aaggcggatggtgatgacatttttgacaggctcacgacctctcaactcaacaagcatctc
tccaactacatgcccggcctcacagcaaaggtgttccgtacctacaatgcctcccacacg
atgtcaacacttcttcaatctctctcggtcgaaaacaggaccatggctgagaagatcaag
ctgtacaacgattgcaaccgtgaggtggccgtgatttgcaatcacaagcgtacggttggc
gcagcccacgaggcgcaaatggagaagcttgcagaccgcatcaagggcctcaagtatcag
aagtggcgcaccaagatgatgatgcttgatctcgatcccaagcttaagaagaagaagggc
gccgagtactttgcactcgacgaggacattacccaggagtggctcttggaacaccagaag
ttccttgtggaggagcagaggaccaagatccagaagaagtttgagaaggacaacgagaag
cgcgttgccgatggcgaagctgagttggacgaaaaggagctcaaggagcgcctcagggtg
gctgcggagctcgaagccaagtacaagaaggagaacaagaccaagaaggtggaggccgag
ggcaagggccccgccgtcgagaagcttgaggcggccgtcagcaagtttgatgaccgcatc
aagacgctcgaactgcaatgcgccgatcgtgagggcaacaaggaggtggccctgggcaca
tccaagatcaactacatcgacccccgtctcacagtcgttttcgccaagaagttcaacgtt
cctattgagaagttcttctccaagacgctacgcgacaagttcaagtgggcgattgagtcg
gtcggcgacgacgacacgtgggagttctga
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