Podospora pseudocomata: QC762_109870
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Entry
QC762_109870 CDS
T09797
Name
(RefSeq) uncharacterized protein
KO
K10981
DNA polymerase IV [EC:
2.7.7.7
]
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
QC762_109870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
QC762_109870
Enzymes [BR:
ppsd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QC762_109870
DNA repair and recombination proteins [BR:
ppsd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
QC762_109870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
HHH_8
DNA_pol_lambd_f
NTP_transf_2
FAR1
Motif
Other DBs
NCBI-GeneID:
87905317
NCBI-ProteinID:
XP_062748373
LinkDB
All DBs
Position
1
Genome browser
AA seq
825 aa
AA seq
DB search
MASLPSPRSRVVRRYKKPGRLFDTLLTQSTRIVPSSVPSQKSPMDEEQPLQEKIAFFNQL
DALDKLDEEDDRIDAREQQHRAKCKAFFQPAVPTVKEKGNPINPLSSPRPHPEPRRTASV
PTPTAPTPAPGGSAEIIKATPDTTTIDSTTSRTRRRLIADTSTSFIAETPITDSTRPRVP
TTLRRSITMPVSSSASAAKQSPSATTALRKRKRSSSGKVIPESAQIFRGLSFFYIPNDDV
APARKLRIAKAKDYGAEWVRSLHNATHVIVDKHLSYSDIQKIPEFGLAASLIVVNDEYPI
DSISFRTLLNPDQSRYWVTGFPSPTSESTVITISSRDSEPSLQVKEPKSARRQSARKQDT
EDSEGTPRQEDSSFENPRPTKTTQAAPFEIQIQSFVPPHPTAQTTDGPKDELTSYIELLQ
QYNDLPLDHEEDDDIESTKDAQEDSDPEPGSEDERARKKPATRSRASLKKTTPFENRFAC
NRGGTKDNPASSAANNPNARTIEVLQSMCDYYTKINDRWRITAYRRAITTLRQQSTKKIT
TAEEAYTLPNIGSRIARKIEEICTTNNLRRLQYANLEPTDKVLDLFLKIHDVGLSRANKW
ISQGHRTLEDLLTKADLSANQRVSIEHYSDLTSRIPRSEVTQLAAFVQREAFLVDPDVEL
LVGGSYRRGSDTSGDIDFIITKRGTTSCSDLVPFMNSLISVLYKKNFLVATLSQSRREGE
GSKFLGCCRLPPGGKWRRIDLLLVPETEYGAALIYFTGNDIFNRSLRLLAGKKGMRLNQR
GLFRDVMRGRGRVGVTEGELVEGRSERRIFEVLGVRWREPSERWC
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggccagtttgccttctccaagatcccgggtcgtcagacggtacaaaaagcctggtcga
ttgttcgacactcttttgacccagagcactcggattgttcccagttcagttcccagccaa
aagagtccgatggatgaggaacaaccgctccaagaaaagattgcatttttcaatcagctg
gatgccttggataagcttgacgaagaggatgaccgaattgatgccagggaacagcagcac
agggccaagtgcaaggccttcttccaaccagcagttcctacagtgaaagagaagggaaac
cctatcaatcctctttcttcacctcgcccacatccagaaccaaggcggacagcgtcggtg
cctactccaaccgcacctacacccgctccaggaggttcggcagaaattatcaaggcaacc
ccagacaccaccaccattgacagtaccacctccagaaccaggaggcgcctaattgcagat
acttctacttcattcattgctgaaacaccaataacagattccacccgtccaagagtccca
acaacattacggaggagtatcaccatgccagtttcatcctctgcctctgcggctaaacag
tcgccgtcagctactactgctcttcgaaagcgcaaacggtcatcttccgggaaagtgatt
ccggaatcagcgcaaatatttcgtggcttgtctttcttttacatccccaacgacgatgtt
gcaccagccaggaaacttcggattgccaaagccaaagattatggggcagaatgggttagg
agtctacacaatgcgacacatgtcattgttgacaagcacttgtcatactctgacattcag
aagataccagagtttgggctggccgcctctttgatcgtcgtcaatgacgagtatcctatc
gacagtatctcgtttcggacactactaaaccccgaccagagccgatactgggtcacaggg
ttcccatcaccaacttccgaatccacagtcataacaatatcatcccgggactctgagcct
tcgcttcaggtcaaagaacccaaaagcgccaggagacaaagcgccaggaaacaggacact
gaggactcagaaggaacaccacgacaggaggatagctcgtttgagaaccctcgcccaact
aaaaccactcaagctgctccgttcgaaatacagatccagtcatttgttccacctcatccc
acagctcaaacgacggatggtcccaaggatgagctgacgagctacatcgagctccttcag
cagtacaacgacctgccgttggaccacgaagaagacgacgacatagaatcaaccaaggac
gctcaggaggactcggatcccgagccgggctccgaagatgagcgcgcccgcaaaaagccc
gcaacacgctcccgcgcctctctcaaaaagactactccgttcgaaaaccgttttgcctgc
aaccgtggcggcacgaaagacaatcctgcctcctccgctgccaacaacccaaacgccagg
acaatagaagttctccaatccatgtgcgactactacaccaaaattaatgatcgctggcgt
ataacggcctaccgcagagccatcaccacactccgtcagcagagcaccaagaaaatcacc
accgccgaggaggcctacactctccccaacatcggctcccgaatcgcccggaaaattgag
gaaatctgcaccaccaacaaccttcgcaggcttcaatatgcgaaccttgaaccgacggac
aaagtcctcgacctctttctcaaaattcacgacgtgggactctctagagcaaacaagtgg
atatcccaaggccatcggaccttggaagacctcctcaccaaagccgacctgtcggccaac
caacgcgtctcgatcgagcactactcggacctcacctcccgcatcccccgcagcgaagta
acccagctagcggcctttgtccagcgtgaagccttcctcgtcgacccagacgtggaatta
ctcgttggcggctcgtaccgccgtggctcggacacgtcaggcgacattgatttcatcatc
accaaacgcgggaccacatcctgctcggatcttgtcccgtttatgaactcgcttatatct
gtgctgtacaagaagaattttttggtggcgacgttgtcgcaatcgagaagagagggggaa
gggagtaagtttttgggatgctgcaggttgcctcctggggggaagtggaggaggattgat
ttgctgcttgtgcccgagacggagtatggagcggcgttgatttattttacggggaatgat
atttttaatcggagcttgaggttattggcggggaagaaggggatgaggttaaatcagaga
gggttgtttagggatgtgatgagggggagggggagggtgggggttacggaaggggagttg
gtggaggggaggagcgagaggaggatttttgaggttttgggggttaggtggagggagcct
agtgagaggtggtgttga
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