Podospora pseudocomata: QC762_110750
Help
Entry
QC762_110750 CDS
T09797
Symbol
SGS1
Name
(RefSeq) ATP-dependent DNA helicase sgs1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03440
Homologous recombination
ppsd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QC762_110750 (SGS1)
03460 Fanconi anemia pathway
QC762_110750 (SGS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsd03032
]
QC762_110750 (SGS1)
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
QC762_110750 (SGS1)
Enzymes [BR:
ppsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QC762_110750 (SGS1)
DNA replication proteins [BR:
ppsd03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
QC762_110750 (SGS1)
DNA repair and recombination proteins [BR:
ppsd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
QC762_110750 (SGS1)
Bloom's syndrome complex (BTR)
QC762_110750 (SGS1)
FA (Fanconi anemia) pathway
QC762_110750 (SGS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RecQ_Zn_bind
Helicase_C
ResIII
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
87905404
NCBI-ProteinID:
XP_062748466
UniProt:
A0ABR0GUQ9
LinkDB
All DBs
Position
1
Genome browser
AA seq
1772 aa
AA seq
DB search
MPYPPILTQALRVIRTIPGIFSITPLPPRNPLLVLNIDASHSGWGPRFLYDPMTRNNLSA
HLSWLLRETTRLRPSGPPLPTAQDPFDNTPPPPAADVTRTSRTSRPNHSSFPSAPAAGAF
PSQTGTAPHDPLHGTAFTQGSHLAATPSTNEVDTDDASGMAKLSAYNSRRPTLATKQQQQ
LPTPVSTTRSTQIGALQRAYSANAAVRPQASSSSPPPPVKTSARVKVEFDDLSEPIDLTE
DRNDGSSSVVGFGDDKRLWREDYTERPEPVSSRGQANPYQQTKVIKTLDEFDEEYPDINE
IVPPSSAVRSALKRSATTPSVVKTHISTPCPPGTSRAFKEPTVQGREAAHGSSAVPTQTV
PAVAASARKRKSPATAEFHSDDFLDEEVDASCTPTNNSSNKRAKRADVVYDSEDEFTTPA
SHGSPDAQSPPGVQDMDVDMEFSIQETPSKAPAPMPMELDNVVSNGSRATVGNTQGSQAS
VPQPVSSGQNPASEASLGSEIERNKHTLGLFLSRPSVLDEMLQLVDSQLQENAEAFRRFL
TQRGLKEERNQERERIKNAKKPLEDKKKALLSLQESHASYKTLNSDQEALVNKIAKAYRD
GMDTEEHEEQLLKLDEEIETAEKTLIAHLIKAGVDDLDFLKNQNDSIAPADSSPKAQAHA
ADARTSPSEGRIIPECPSLITGPSQPPATSQYSGSQSQRGPSQFAAPAQFAAPQFRPPVP
HFPPNQQHTQFSGSRVQPPYHQAVPSSSNHFDVDEDELAAMEAASQFAPPRAHNRTQTQA
AEIDEYGQDDVPDDLLLSAYEQFSGGPSAPSATAAVRTAARSTLSEATSNSAPAPPRRAL
AKLAPPVVRKTAIPPELLQFPWSADVLRALKDRFRLVNFRHNQLPAINCTLAGEDAFVMM
PTGGGKSLCYQLPAVVQSGKTKGVTIVVSPLLSLMSDQVEHMERINILAVAFNGNLAAAH
KRHILGKLNHETPENFYQLLYVTPEMLANENTQIRRALKMLHQRGKFARLVIDEAHCVSQ
WGHDFRPDYKALGEFRKQFPGVPVMALTASATESVRKDVQHQLGMTGCKLFMQSFNRPNL
YYEVFPKPPTYVDPLGSLIATRYKNQTGIIYTTSRASCEGIAGKLVEKYGIKAAPYHAGL
DDRPEIQRKWQDDEIHVIVATIAFGMGIDKPDVRFVIHVSLPKTMEGYYQETGRAGRDGK
PADCILYFSYGDVTSLRRMVQKDELDKDGKHVRSQAEKDKQLELLDRMTFYCLNTTSCRR
TQLLGYFGEDFNAANCNKQCDFCLLGERVTLKQVDRTDWAKAIIDLIPGMGAKGGSIGKL
ASAMAGRDKKNYQHLPGFGIAPGIKNTAIYPVIIEMERVKIIHSTAETSANGGLNLYYHV
SKENFRHFWSSGTRLTILMPEQDLFSRKCLVKSEAMVRAPPSTNVSSPVSAPARKRLAPR
RGRQFIDDEAEGDFGDELGSGDEDEDIQDHRPRHANGYAKDNFVVSNYEEEVDFDAAAPS
RHHRTASRHQQTLDKLRPFDFSQLDQVHQVITDHFLFEAKQLEIQIRAETNHIRPFFTDQ
QYREMIARWTTTPAKMYTIRGVTPDKVDQWGSHFVPLIQQLHQQYQEMMSNQDPSRNQYS
GAATIAPKAHIRKKGNRDVIVISDGEEEFGDFDDEEDMASGSRYGAGAPFVNPEVAAFHR
ELKAMQREADAERLAKAASNSQHQGSGYGSRSGGGSYYKKKGGRGSNGYSRNSGGVSKRG
GSSAKSAGGSSRSKGSSYPRGGGGGGISAMPR
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atgccctatccacccatcctcacacaagcactcagagtgattcgaaccattccagggatt
ttcagcatcacccccctccctcctcgcaatcctctccttgtgctcaacatcgatgcgagc
cattcgggttggggcccaaggttcctgtacgatcccatgactcggaacaatctgagtgct
catctgtcgtggctcttgagagagacgacgcgcttgaggccatcgggaccacctttaccc
accgcccaagaccctttcgacaacacccctccacctcctgctgccgatgtgacccgcact
tcacgcacttcacgacctaaccattcttcatttcctagtgccccggctgccggtgccttt
ccatcacagactggcactgccccccacgaccctcttcatggcactgcctttactcaagga
tcacacctcgctgccaccccttccaccaatgaggtagacaccgacgacgcgagcggaatg
gcaaagctgtccgcctacaacagccgccggccaacattggcgacaaagcagcaacagcaa
ctccccactccggtctctactactagaagtacacagatcggagctttgcagcgcgcctat
tccgccaatgctgctgtccggccccaggcaagctcttcctcgccgccgccgcccgttaag
acaagcgcccgcgtgaaggtcgagtttgacgacctctccgaacccattgatctcaccgaa
gatcgcaacgatgggtccagctctgtggtgggctttggcgacgacaagaggttgtggcga
gaggactataccgagcgccctgagcctgtctccagccgcggccaagcgaacccttatcag
cagaccaaagttatcaagactttggacgaatttgacgaagagtatccagacatcaatgag
atcgtcccgccctcctcagccgtccgctcagctctcaaacgcagcgccacgacgccttca
gttgtgaagactcatatctctaccccctgcccgcccggaacaagccgtgcgtttaaggaa
cccacggtccagggccgtgaagccgctcatggtagttctgctgtacccactcaaactgtc
ccagctgtcgcagcatccgctcgcaagcgaaagtcgcccgcgactgccgaattccacagc
gacgactttttggacgaggaggtggacgcttcatgtaccccaaccaacaactcgtcaaac
aaacgggcgaagcgtgccgatgttgtctacgactcggaggatgaattcaccacgccggcc
tcccacggatcgcccgacgctcagtcgcccccaggagttcaagatatggatgtggacatg
gagttttccattcaggagactccctcgaaagcgccggcgccgatgcctatggaactcgat
aatgtcgtcagcaacgggagcagagcgactgtcggtaacacgcagggatcccaagcctcg
gtgcctcagcctgtcagctcggggcaaaacccagcctcggaggcttctctcggctctgag
attgagcgtaacaagcataccctgggcttgtttctttctcggccctcggttttggatgag
atgctgcaacttgtggactcccagctccaggagaacgcagaagcttttaggagatttttg
actcagagggggttgaaagaagagcgtaatcaagagcgcgagcgcatcaagaatgcgaaa
aagcctttggaggataagaagaaagcactgctttctctccaggagtcacatgcctcgtac
aaaacgctgaacagtgatcaggaagccctggtaaacaagattgcgaaggcgtatcgcgat
ggcatggacacagaggagcatgaggaacagctgctgaaacttgatgaagaaatcgagacc
gcagagaaaacactcatcgcccacctcatcaaggctggcgtcgatgatctcgattttctt
aagaaccaaaacgactccattgcgcctgccgactcttccccgaaggcacaagcccatgcg
gccgatgccaggacttctccgagtgagggacgcatcattcctgaatgcccttctttaatt
acaggtcctagtcagccccccgccacgtcacaatactctggtagccaatctcagcgaggc
ccatcccagtttgctgcaccggctcagtttgctgctcctcaatttcgaccgccagttccg
cacttcccaccaaaccaacaacatactcagttttcgggatctcgggtccagccaccctac
catcaagctgtgccaagcagctcgaatcacttcgatgttgacgaggacgaacttgctgct
atggaggcagcctcgcaatttgcaccaccacgggcgcacaacaggacccaaacacaggcg
gccgagatagacgagtatggacaagacgatgtcccggacgatttgttgcttagtgcatat
gagcaattttcaggaggcccgtcagcaccctcagcgactgccgctgtgcgaacagctgcc
cgctctacgttgtctgaggccactagcaatagtgctcccgcaccacccaggcgagctctt
gcgaagcttgcaccacctgtggtacggaagactgccattccgcctgagctcctgcagttc
ccctggtctgcagatgtccttcgagctctgaaagaccgctttcggctcgtcaacttccgc
cataaccagctcccagccatcaactgcactcttgccggagaggatgcctttgtcatgatg
ccgacaggaggtggaaaatcgttgtgttatcaacttcccgcggttgttcaaagtggaaaa
acaaaaggtgttaccattgtggtgtcacctctcctcagtttgatgagtgaccaagttgag
cacatggaaaggatcaatatcctggctgtggcgttcaatggaaacctggcggcagctcac
aaacgacatatactggggaaactcaaccacgagacgccggaaaatttctaccagctgctc
tacgttaccccggagatgctcgccaacgagaacacccagatccggcgcgcacttaagatg
ctgcaccagagaggcaagtttgctcgtttggtcattgatgaagcccattgtgtcagtcag
tggggtcacgattttcgtcccgactacaaagctttgggcgagttccgaaagcagttccca
ggtgtcccggtgatggccttaaccgcctcggcgaccgagagtgttcggaaagatgttcag
catcagcttggaatgacaggctgtaaactcttcatgcagagcttcaaccggcccaatctc
tattatgaggtctttcccaaacccccaacctatgtcgacccgctcggcagtttgatcgcc
accagatacaagaatcaaaccggcatcatctacacgacgtcccgcgcttcttgtgagggc
attgctgggaagcttgtggagaagtatggcatcaaggcagcgccgtaccatgccggattg
gacgacaggccggagattcagcggaagtggcaggatgatgaaattcacgtcattgttgcc
acgatagcctttggcatgggaattgacaagccagatgtgcgttttgtcatccacgtctct
cttccaaaaaccatggaagggtactatcaggagaccgggcgcgctgggcgtgatgggaag
cctgccgactgcatcctttacttttcctacggcgacgtgaccagtctgaggcgcatggtg
caaaaagatgagcttgataaggacggcaagcacgtgcggtcacaggctgagaaggacaag
cagctggagctgctagataggatgacgttttattgtctgaacacgacttcttgtcgtcgg
acgcagctgctggggtattttggggaagacttcaatgctgccaactgcaacaagcagtgt
gacttttgccttctcggcgagagagtcactcttaagcaggtggaccgcactgactgggcc
aaggctatcattgacttgattcccggcatgggtgccaaaggcggctctatcggtaaactc
gcttccgctatggccgggcgagataagaagaactaccaacacctgccaggctttggcata
gcacctggcatcaaaaacacagccatctatcctgtcattatcgagatggagagggttaag
ataattcatagcacagcggagacgagcgcaaacggcggtcttaatctttactaccacgtc
tccaaggagaatttcagacacttctggtccagcgggacaagactgaccatcttgatgccc
gagcaggatcttttctcccgcaagtgcctggtcaaatccgaagcaatggttcgagcaccg
ccctctaccaatgtgtcgtcgcctgtttctgcaccagcgagaaagcggctggcgcctcgg
cggggtcgacagttcattgatgatgaggccgaaggagattttggagacgaactcggttcc
ggtgatgaagacgaagatatccaagaccacaggccgcgacatgccaatggctatgccaag
gacaatttcgtggtatccaactacgaggaggaagtggactttgacgccgccgccccatct
cgtcatcatcgcactgcttcacggcaccagcagaccctggataagcttaggccatttgat
ttctctcaactggaccaggtccatcaagttatcacggatcatttcctttttgaagcgaag
cagcttgagatacagattagggccgagacaaaccatattcgcccctttttcacggatcaa
cagtatcgcgaaatgatcgctcgttggacaacgactccggccaagatgtacaccatccgc
ggcgtcactcctgacaaagtagaccagtggggttctcactttgtgcccctgattcaacag
ctgcaccaacagtaccaggagatgatgagcaaccaggatcccagcagaaatcagtattct
ggcgctgccacaatcgcccccaaagctcatataaggaagaaggggaatcgagacgtcatt
gtgatcagtgatggagaggaggagtttggtgactttgacgacgaggaagatatggcgagt
ggatcacggtatggcgctggtgctccctttgtgaaccccgaggtggcagcctttcatcga
gagcttaaagcaatgcagagggaagctgatgctgagaggcttgccaaagccgcctccaac
tctcagcatcaaggttctggctatggcagcagaagcggtggcgggtcctactacaagaag
aaaggtggacggggcagcaatggatacagccgcaattcaggaggtgtaagcaagcgtgga
ggttcttcagccaaatcggcaggtggcagcagcagaagcaagggctcgtcttaccctcgg
ggtggaggcggaggtggaatttcggccatgcctcgttaa
DBGET
integrated database retrieval system
