Podospora pseudocomata: QC762_112110 Help Entry QC762_112110      CDS       T09797                                  Symbol PRP40 Name (RefSeq) U1 snRNP protein   KO K12821   pre-mRNA-processing factor 40 Organism ppsd  Podospora pseudocomata Pathway ppsd03040   Spliceosome Brite KEGG Orthology (KO) [BR:ppsd00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     QC762_112110 (PRP40)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:ppsd03041]     QC762_112110 (PRP40) Spliceosome [BR:ppsd03041]  Complex A   U1 snRNP components    U1 related factors     QC762_112110 (PRP40)  Complex B     QC762_112110 (PRP40) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  FF WW WW_2 WW_TCERG1 Pga1 Motif Other DBs NCBI-GeneID:  87905539 NCBI-ProteinID:  XP_062748615 LinkDB All DBs Position 1 Genome browser AA seq 867 aa AA seqDB search MNGHFAPSGAPAVWTEHKTPDGRTYYYNTLTKVTQWTKPEEMMTPAERALENQPWKEYTA EGGRKYWYNTETKQSSWEMPDVYKRALGAGDSAATTPTGPSASFGAAGGGSGHHGGSYDH HHQQRDHRDYRDHREPMGESRQLTYGSNIQAQAFVSASNDPEYATAEEAEAAFVKLLRSS KVQPDWTWEQAIRAIVKDPQFRAIKDPRDRKAVFEKYCHDVVVQDKERAKERLTKLRADF ATMLRSHPEIKHYTRWKTARPMIEGETIFRSTNDENERRQLFEDYVSDLKRAHKEQQVTM RKSAMDGLIELLPTLSLEPYTRWAEAQGTIQNTPLFQSDEKYKTLSKFDVLTVFQNHVKS LERNFNDSKQEEKNKKFRQERKARDNFKVLLTELKRDGKITAGTTWTQIHPLIADDARYR AVAGNPGSTAMELFWDVVEEEERALRGTRNDVLDVIGVSAPDMDSNKMQADKSIQDKRFE VTPKTTFEEFEAVVRGDARTANIERKILELIFERVQQKRTKRTDEDKVQRRALDDLRAAM KRLEPPITVTDTYEQVKARLAQSEAFRTVNSEEARRGAFDKYIRRLKEKDEENENERQRR RERPDGHRDRGERSYRSGRSARSRSRSPEHNTYEADRRHAMADRERNYRKTSAAEVLLSD RRSADGHHDSVRDRERDRDRDRDRISERDRERDRDRDRDRERDRDRARDYRDRDRDRDRE RDRDRDHGRDRDRDRDRDHRDHRDYDRRSRPADDFNHYDRERRTREEDRERIYRRRVLER DVDELPYGDERPSSSSRRPRPEEDDHDRRSPRQAKRIKVEDDRAATPSAATATAQPKSAA AAPAAIKEEKPSPSVRAGSEEGEIEED NT seq 2604 nt NT seq  +upstreamnt  +downstreamnt atgaatggacattttgcgccgtcgggggcgcccgcagtttggacagaacacaagactccc gatggccgtacatactattacaataccttgaccaaggttacgcaatggaccaagccggag gaaatgatgacacccgccgagcgcgcgctggaaaaccaaccatggaaggagtacacggca gagggaggccggaagtattggtataacactgaaacaaagcagagctcctgggagatgccc gatgtctacaaacgagccttgggagctggtgattctgctgccaccacacctacaggccca tcagcttcatttggtgcggctggaggaggtagtggtcatcatggcggttcgtatgaccac caccaccagcaacgcgatcatcgggattatcgcgaccatagggagcccatgggcgagtcc agacaactcacctatggcagcaacattcaggcgcaagccttcgtctccgccagcaacgat cctgagtatgccaccgccgaagaggcagaggcggcgttcgtgaagctccttcgcagcagt aaagtccagcctgattggacctgggagcaggctatccgcgccattgtcaaagatccccag ttccgcgccatcaaagatccgagggatcgcaaagctgtctttgagaagtattgccacgat gtcgttgtgcaagacaaggaacgtgccaaggaaagactgaccaaacttcgcgctgacttc gccaccatgctccggagccacccagagattaagcactacacccggtggaagacagcccgg cccatgatcgagggcgagaccatcttccgctcgactaacgacgagaacgagcgccgtcag ttgttcgaggactacgttagtgacctcaaacgggctcacaaggagcagcaggtcacaatg cgcaagagcgctatggatggtctgatcgaactgcttcccactctcagtttggagccctac actcgctgggctgaagcacaaggtaccatccagaacacccccttgtttcaaagtgatgag aaatacaagacactcagcaagtttgacgtgttgaccgtcttccaaaatcacgtcaagtcc ttggaacgtaacttcaacgactcaaagcaggaagagaagaacaagaaattccgccaggag cggaaagctcgtgataacttcaaagtcctcctcacagagctgaagagggatggcaaaatc actgccggcaccacctggacccagatacaccccctgatcgcagacgatgctcgctacaga gctgtcgccggtaatcccgggtctactgccatggagctgttttgggatgttgttgaggag gaagagcgcgctctcaggggcactcgcaatgatgtgcttgacgttattggtgtaagtgct cccgatatggattccaacaaaatgcaagctgacaagtcgattcaggacaaacggttcgaa gtcaccccgaagaccacttttgaagagtttgaggcagtcgtgaggggtgatgctcgtaca gctaacattgaacgtaaaattcttgagcttatttttgaacgggtccagcagaagcgcaca aagcgcacagacgaagacaaggtgcagcgccgcgctctcgacgaccttcgtgcagccatg aaacggttggagcctcccatcaccgtcactgatacttacgaacaggtgaaggccaggctt gcccagtctgaggcattccggactgtgaactctgaggaagctcgtcggggcgcctttgac aagtatattcgtcgccttaaggagaaggatgaggaaaatgaaaacgagcgccaacgccgt cgggaacgcccagatgggcatcgtgatagaggtgagcgatcctaccgaagtggacgttct gctaggagccgcagccgcagccccgaacacaacacctacgaggccgatcgtcgccacgcc atggccgaccgcgagcgtaactacagaaaaaccagtgcggccgaggttctactttccgat cgtcgttctgccgatggccaccacgattcagtgcgtgatcgggaacgtgacagggaccgt gatcgggatcgcatctctgagcgtgatcgtgaacgtgaccgcgaccgcgaccgcgaccgt gagagggatcgtgatcgggcccgcgactatcgggatcgtgatcgtgaccgggaccgtgag cgagatcgcgaccgggatcacggccgtgaccgcgatagagaccgtgacagagaccaccgc gaccatcgcgactatgaccggcgctctcgccccgccgacgacttcaaccactacgatcgt gagcgccgcacacgtgaggaggatcgggaacgtatttatcgcaggcgagtacttgagcgc gacgttgatgagctgccatacggtgacgagcggcccagttcctcatctagacgcccgcgc cccgaagaagacgaccacgaccgaaggtctccccggcaggcgaagcgcatcaaggttgag gatgaccgtgccgctaccccctcggccgccaccgccaccgcccagcctaagtctgccgct gcagctccggcagctatcaaggaagagaagccctcccccagtgtccgcgctggtagtgaa gagggcgagattgaggaggattaa

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