Podospora pseudocomata: QC762_114560
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Entry
QC762_114560 CDS
T09797
Name
(RefSeq) uncharacterized protein
KO
K12586
exosome complex component RRP43
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QC762_114560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsd03019
]
QC762_114560
Messenger RNA biogenesis [BR:
ppsd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
QC762_114560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Orexin
Motif
Other DBs
NCBI-GeneID:
87905781
NCBI-ProteinID:
XP_062748887
LinkDB
All DBs
Position
1
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AA seq
325 aa
AA seq
DB search
MATASPAPSGPQPSLTFTRPVFAKLSPHPYLLRTLSPDSPDQQPTRDNGRAPHQSRPIQI
NTSSLSQAHGSSLVRTGDTTVICGVRGELLPVTAIPQFRPHNGTLYDQDEGDEARARKEL
KDYDLLVPNIELATGCAPQFLPGVPPTTLAQTVSTRVYSLLHGAGVVDGRGLRVWFTPES
KKEEGDMEVEGEEEREEQKPQVVAYWVLYIDLLFVSFDGNPFDAAWAAVLAALKDTKLPM
ARWDPDREMVVCRKGQDTRLNVRGLPVACSAAVFLEKEHGEVGRGERNRHWILLDPDRSE
EELCKEEIVEMVIWKDEDDDKVEGM
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcttcaccagcgccatccgggccccagccctccctcacctttacccgcccc
gtcttcgctaagctctccccccacccatacctccttcgcactctttcccccgactcccca
gaccaacagcccacccgcgacaacggccgcgcgccgcaccagtcacgcccgatccagatc
aatacctcctccctatcccaagctcatggctcttccctcgtccgaacaggcgacacgacc
gtcatctgcggcgtccgaggcgagctcctccccgtgacggctattccccaattccgacct
cacaacgggacgctctacgatcaagacgagggcgatgaggcaagggcgaggaaagaactc
aaggattacgatctgctagtccccaatattgagctggcaacagggtgcgcgccgcagttc
ttgccgggtgtgccgcctacgacgttggcgcagacggtgagcacgagggtgtacagtctt
ttgcacggggctggggtggtggacgggcgggggttgagggtgtggttcacgccggagagt
aagaaggaggaaggggatatggaagttgaaggggaggaagagcgggaggagcagaagccg
caggtggtggcgtattgggtgctgtatattgacttgctctttgtcagctttgacgggaac
ccgtttgatgctgcttgggcggcggttttggctgcgctgaaggatacgaagcttcccatg
gcgaggtgggatcctgatagggagatggttgtttgccggaaggggcaggatacgaggttg
aatgtcaggggactgccggtggcttgttcggcggcggtgtttttggagaaggagcatggt
gaggtgggaaggggggagcggaataggcattggattttgttggatccggatcggagcgag
gaggagctgtgcaaggaggagattgtggagatggttatttggaaggatgaggatgatgac
aaagtagaagggatgtaa
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