Podospora pseudocomata: QC762_117830
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Entry
QC762_117830 CDS
T09797
Name
(RefSeq) uncharacterized protein
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
QC762_117830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
QC762_117830
Enzymes [BR:
ppsd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
QC762_117830
DNA repair and recombination proteins [BR:
ppsd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
QC762_117830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_TPR
FAN1_HTH
DUF4597
Motif
Other DBs
NCBI-GeneID:
87906127
NCBI-ProteinID:
XP_062749278
LinkDB
All DBs
Position
1
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AA seq
863 aa
AA seq
DB search
MDRFVQRSKSSTSRSPLATGSGNSNKRPEGAAQRTTPTKRRRVAEPKESGDEDDEFDLPT
LTKSVRDSEDEAPKMPPRQTAIESSLPAVPIDKEAIEQYEAMRSSQPQIDEDNTTTRFEK
RQWVPGKSSIYVDAFNLALETVLEDESPLFDIKENHVFEQWRGLSYETQYLYVRLFLRKT
ASWHRVERLQSSYSNDITDVDLAIENLLEPRELPGDSNNSPEETRSEGLEVWSLGDTFTF
ADDSQEYIKTMADATPLLSLDELKALAKDAKVKGKNKADLVKALCHTSARQAGLLSLGLS
RQNTNESIASRDQEPEDNQEKTEVNRDSHFLRKILATTGPLIRLSEPIFKLFERVHLVFY
RSTEWTENSLTAIILAKIARRNYPDYIVCRSSNIFDSRQSLLEFELSMRKDFEVDKVLEF
NGPPGEAGFLKVLEIFEGIAERWRELLRQEQHRENHVYEFGEGSYLRRFNAAHAFTRVAH
KAAYVLGRLHRYREEHALLTELLSQHLFHPARRGSWYQRKALLEERYMWEVDPDPVSTSP
ETQKKHWQQIALITCETGLEDRDCHLIYHYDLQKRLLKLEKRLRVPRRLQHDFGHVKLRE
PEEHNVQGIQLVRDGPDPKGKNGRGLSTKTTWLDELGELDEDGEPAHVSVEEMCLSYYRH
EGWKGYHSEGGILRTLFAYLFFDILFVYVPNVFQTAFQTCPLDLHTDAFYPARASQINHR
LVEIANGGGEKILREVYEREHERQTCVVGLNWDFEIEDLVELVSCFNRAALAAVCKVMSE
DYRARGGGVPDLVLWRTAGDEAQTNRDGINNNIDRKGEVMFVEVKSANDRLSDTQRLWIH
VLTGAGVRVALCNAVAREVRTLL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggatcgttttgtgcagcgatccaagtctagcacgagccggtcaccgcttgccactgga
tccggaaattccaacaagaggcctgagggagctgcgcaacggactactccaacaaaacgg
agaagggttgccgagccgaaggagagcggtgatgaagacgatgaatttgacttgccaacc
ttgaccaagagtgtcagggacagcgaggatgaagctcccaaaatgccaccacgccagaca
gcaattgagagctctttgccggctgtcccgatagataaagaagcgatagagcagtatgag
gccatgcgctcctctcaaccacagatcgatgaagacaataccactaccaggttcgaaaag
cggcaatgggtcccaggaaagagctctatctatgtcgatgccttcaaccttgcattggag
accgtcttggaggatgaatcgcctttgtttgatatcaaagagaaccatgtctttgagcaa
tggcgaggcttgagctatgagactcagtatctgtatgtacgtctctttctgcgcaagact
gcctcttggcatcgcgtggaacggctgcagtcttcttacagcaacgatatcaccgatgtt
gatcttgctattgagaaccttttggagccccgggagttgccaggtgacagcaataattct
ccagaagagacacgatctgagggtctcgaagtgtggtcattgggcgacacttttaccttt
gcggatgactctcaagaatacatcaaaactatggcagacgccactccgttgttgagtctt
gacgaactcaaggcacttgcaaaggatgccaaggttaaggggaagaacaaagccgatcta
gtcaaggcgctctgtcacacaagtgctcgacaggccggcttgctgtccttgggactaagt
cggcaaaatactaatgaatcgatagcctcgcgagaccaggagccagaagacaatcaagaa
aaaacggaagtaaacagggattctcactttctcaggaagatacttgctaccacagggcca
ctcatcaggctctccgagcccatcttcaaactcttcgagcgtgttcatctggtcttctac
cggtcaaccgaatggaccgagaactcactgacggcgatcatcctggctaagattgcacga
aggaactacccagactatatcgtctgcagatcctccaacatattcgactcccgccaaagc
ctcctggagttcgagctctcgatgcgcaaagacttcgaggtggacaaggttctcgagttc
aatggcccaccaggtgaagcaggtttcctaaaggtcctcgagatctttgagggcatagct
gaacgatggagagaacttctcaggcaggaacagcaccgcgaaaaccatgtatacgagttt
ggcgaagggagttaccttcgtcggttcaacgcagctcacgccttcactcgggtcgctcac
aaagctgcctacgtccttggccgtctacaccgatatcgggaagaacacgcgcttctcacc
gaattactcagtcagcatctcttccatccagcccgccgcggatcgtggtatcaacgcaag
gccttactggaggaacggtacatgtgggaagtggatccagaccctgtgtcaaccagtccc
gaaactcagaagaagcactggcaacagattgccctcatcacctgcgagacgggactggag
gatagagactgccacctgatctatcactacgacctccaaaagcgccttctcaagcttgaa
aagagattacgggtgccacgtcgtctgcagcatgactttggtcatgtgaagctacgggaa
ccggaagagcataacgttcagggcatccagttggtccgagatggcccggatcccaaaggc
aagaacggccgcggcctgagcaccaagacgacgtggctcgacgaactaggcgagcttgac
gaggatggagaaccagctcatgtcagtgttgaggagatgtgcctatcatactatcgccac
gagggctggaaaggctaccacagtgaaggtggaattctccgaacattgtttgcttacttg
ttcttcgacatcttattcgtctatgttcccaatgttttccagacggctttccaaacatgc
cccctcgatctccacacggatgcattctacccagcccgggccagtcagatcaaccatcgg
cttgtcgagattgccaacggtggtggcgagaagattttgcgggaggtttacgagcgggag
catgagaggcaaacctgcgttgtaggcttgaactgggactttgaaatcgaggacttggta
gagttggtctcctgtttcaacagggctgcccttgctgccgtatgcaaagtcatgtcagaa
gactatagggcacgcggaggcggcgtgccagatctcgtgctgtggaggacagccggagac
gaagcccaaaccaatcgagatggcatcaacaacaacattgaccgaaaaggagaggtcatg
tttgtcgaagtcaagagtgcaaacgaccgcctcagtgatacacaacgactatggatccac
gtactcacaggcgcaggagtgagggttgcgctgtgcaatgccgtggcacgagaggtgcga
acattgctgtga
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