Podospora pseudocomata: QC762_120580
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Entry
QC762_120580 CDS
T09797
Symbol
APN2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
ppsd
Podospora pseudocomata
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
QC762_120580 (APN2)
Enzymes [BR:
ppsd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
QC762_120580 (APN2)
DNA repair and recombination proteins [BR:
ppsd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
QC762_120580 (APN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
87906402
NCBI-ProteinID:
XP_062749585
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All DBs
Position
1
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AA seq
614 aa
AA seq
DB search
MFDTLEADIVVMQEAKIQRKDLQDDMVLIPGWDVYFSLPKHKKGYSGVAIYTRSSKCAPI
RAEEGITGILCPPNSSTTFRDLPEDQQIGGYPRPGQLSGEVDEATLDSEGRCVILEFPAF
VLVGVYSPATRDESRDEFRHAFTEAMDVRVRNLVAMGKEVVLTGDLNIIRSELDTAGLVE
QLRKEEVSLDDFFSSPSRRFLNQIVFGGRVVGTRDEGREEAVLWDLCREFHPTRTGMYTC
WDTRKNCRPGNFGSRIDYVLCSSGIKDWFIDANIQEGLLGSDHCPVYATMGDTVNHNGTT
VPITDVMNPPGMFKDGERQREWTIKDALPTSAKLIPEFSNRRSIKDMFFKKPKATIKPTT
ATAIPGSQDPPPLTITISTGPEKDSWAQGDLASSQPSSQVTAPPSSGSTLVASPQKPPVK
RPAVASPAKRPQKKGKVTLAKEPSKTGASASQGTLKSFFKPKTPVPSPSQEPTGTDNTAS
ATADISTASELLPAELPPEIPSPNQSSKGSAESSAKETPLTTVPTDDKVFDPIENKASWS
KLLGKRVVPKCEHGEDCVSRITKKPGVNCGRSFFMCARPTGPSGKKEDGTTEFCCKTFIW
SSEWKPSSSASLSG
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacacgctggaggcagacattgttgtcatgcaagaggccaagatccagcgcaag
gatctgcaggatgacatggtcttgattccaggatgggatgtctacttcagcctccccaag
cataagaagggctattctggagttgccatttacactcgttcttccaagtgcgctcccatc
cgcgccgaggaaggcatcaccggcatcctctgcccaccgaactcctccacaactttcaga
gaccttccagaagaccaacagatcggaggttatccgagaccaggacagctttccggcgaa
gttgacgaagccacacttgactctgagggtcgctgtgtcatcctcgagtttccagctttt
gttctcgtaggagtctacagcccagcaacccgagacgaatcacgagacgagttccgccat
gctttcactgaagccatggatgtcagagtacgcaatctcgtcgcgatgggaaaggaggtg
gttcttaccggtgatctcaacatcattcgctcagaattggacacggccggtctggtcgaa
caattacgaaaggaagaagtgagtcttgatgatttcttctccagtccgtcccgccgcttt
ctcaaccaaatagtatttgggggacgtgtggttgggacaagagacgagggccgtgaggaa
gctgttctatgggacctctgcagggaatttcatcccacccgtaccggaatgtacacttgc
tgggatactcggaaaaattgcaggccggggaactttgggagccggattgattacgttctc
tgcagctctggaatcaaggactggttcatcgacgccaacatccaggagggtcttctcggt
tctgaccactgcccagtctatgccaccatgggcgatactgtcaatcacaacggcacgacg
gttcccattaccgatgtcatgaacccaccgggcatgttcaaggacggcgaacgacaacga
gagtggaccatcaaagatgccctcccaacttcggcaaagctgataccagaatttagcaac
cgacggagcatcaaggacatgttcttcaagaagcctaaagcgacgatcaagccaacgaca
gcaacagccattcctggcagtcaagacccacctcctctcaccattaccatctctacgggc
cctgagaaagactcttgggcccagggcgatctggcctcctcacagccatcgagtcaagtc
acagcacccccaagctcaggcagcacacttgtggcctctccacaaaagccaccagtgaaa
cgcccagcagtcgcttcccctgctaaaagaccacagaagaagggaaaggtcacacttgcg
aaagagccgtccaagactggtgcgagtgcctcccagggcacgctgaaaagcttcttcaag
cccaagacacccgttcccagcccaagccaggagccaactggcacagacaacacagcctcg
gccacagcagacatttctactgcttcagagttgctaccagcagaattaccccctgaaatc
ccaagccccaaccaatcttcgaaagggagcgccgaaagctctgccaaggaaacgcccctg
acgaccgtcccaactgacgacaaggtctttgatcctattgagaacaaagcctcctggtct
aagctccttggcaagcgcgtcgtcccaaagtgtgagcatggcgaggattgcgtatcgagg
ataacgaagaagccgggggtcaattgtggccggtccttcttcatgtgcgcccgtcccacg
ggtccgtctggcaagaaggaggacgggacgacggaattctgctgcaagaccttcatctgg
agcagcgagtggaagcctagctcttcggcgtcgttgtctggctag
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