KEGG   Podospora pseudocomata: QC762_120830
Entry
QC762_120830      CDS       T09797                                 
Symbol
lsm7
Name
(RefSeq) U6 snRNP-associated protein Lsm7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
ppsd  Podospora pseudocomata
Pathway
ppsd03018  RNA degradation
ppsd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppsd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    QC762_120830 (lsm7)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QC762_120830 (lsm7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppsd03019]
    QC762_120830 (lsm7)
   03041 Spliceosome [BR:ppsd03041]
    QC762_120830 (lsm7)
Messenger RNA biogenesis [BR:ppsd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     QC762_120830 (lsm7)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     QC762_120830 (lsm7)
Spliceosome [BR:ppsd03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    QC762_120830 (lsm7)
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 87906427
NCBI-ProteinID: XP_062749611
LinkDB
Position
1
AA seq 150 aa
MSERPYQPRGGHRGGSGGGRGGPHRGGGNRGGGRGGHQNQQGHQHQGGSGEQTERPKKEN
ILDLKKYMDKRITVKFNGGREVTGTLKGYDALMNLVLDEVQEAVRDDEGNETTRSLGLVV
VRGTLLVVISPVDGSEVIANPFLQQEEMED
NT seq 453 nt   +upstreamnt  +downstreamnt
atgagcgaaagaccctaccagccccgaggcggtcacagaggaggaagcggaggaggcagg
ggaggtcctcatcgcggcggcggtaatcggggcggcggtcgcgggggtcaccagaaccag
cagggacaccaacaccaaggcgggtccggggagcagacggagcgtcccaagaaggagaat
attcttgacctgaagaagtacatggacaagaggattacggtcaagtttaatggcggacgg
gaggtgacgggtacgctaaaggggtatgatgcgttgatgaatttggtgctggatgaggtt
caggaggcggtcagagatgacgaaggcaacgaaactacgcgatcgcttggtctcgtggtg
gtacgcggcacccttctggttgttatttctcccgtggacggcagcgaggtgatagccaac
ccgttcttgcagcaggaggagatggaggattga

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