Podospora pseudocomata: QC762_200200
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Entry
QC762_200200 CDS
T09797
Name
(RefSeq) uncharacterized protein
KO
K12597
protein AIR1/2
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QC762_200200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsd03019
]
QC762_200200
03016 Transfer RNA biogenesis [BR:
ppsd03016
]
QC762_200200
Messenger RNA biogenesis [BR:
ppsd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
QC762_200200
Transfer RNA biogenesis [BR:
ppsd03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
QC762_200200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
ATP11
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
87906810
NCBI-ProteinID:
XP_062746660
LinkDB
All DBs
Position
2
Genome browser
AA seq
722 aa
AA seq
DB search
MDTAQDTVVDDHPVARKRSLSEVEPSSPAGEDVDSTRKRTRTVEPDEKDEGEITDSMSGS
SPAPESFTPVQPFAKAHNGWNAGVNGGLRISFPSLRKPPQTNAEGDQVPKAPEAESGQPS
EEKPQVQGQPDTAVELEARPSIEGLITPDGYPSQPKNSRRRSWDARFKHWCIELMRLNKD
HEGVQDPEVLREAWSNWLQNRKKQDPLAQTAALRAAQSFEFTPEALTEMASAALTPENEP
ASPAEQQSDRSTDKATSDTGKSENSNKPLTTWEAGGMIQPIRPNQSALPLDAKDDQAWEH
IFTIWCQDLAEINSKKIKTKEPRDFNRILTAYNQWIGTIDGLPKIRATAARRNASNYLAK
NKGRVASLLSGRPLDDEQETEEEEPKEKEAGEEPVPETVVAEETLPLAAPVNDGNEEVKN
IPLTEGEMAYRDRYFPGLAPDAVFCVMCASSEHNSAECPEMACKFCHKDHPCWTCPARQR
CSKCKQLGHSVAECKEQLILAQDEMDCALCGSRDHIEYSCVNLTRSFRPNPSNTPKVQSL
PVFCYRCGAEGHYGGDCGLSALEKKGSSFNPFTKANASQYVDPNSSETALAYRGGHRSAA
DYRSGGRPDLGKSIVPRQHIQFESDDDDDDEFIQPIVQKPRRSGHITFSGYSGNGSQNQE
KPSARYPSSLPPKPPAVSVQPLPRGPPPPLPPGNNSFGRKHGGGGSRGRGRSGGGGRGRG
RY
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggatacagcgcaagatactgtggtggacgaccacccagttgccaggaaaagatctctt
tcagaggtggaaccttccagtccagcaggcgaggatgtggactcaaccaggaaacgcaca
aggactgtcgagcctgatgagaaggatgagggggagatcacagattccatgtctggctcg
tcgccggcaccggagagcttcacgccagtccagcccttcgccaaagctcataatggctgg
aatgctggtgtcaatggcgggttgaggatatcctttccctcgctcaggaagccaccccaa
acaaacgctgagggtgatcaagtcccaaaggccccagaagcggagtccgggcagccgtcc
gaagaaaaaccccaggtccaaggtcagccagatactgccgttgagcttgaggcaaggccg
tctattgagggtctgattacaccagatggatatccgagtcagcctaaaaactctcgacga
cgatcctgggatgccaggttcaagcattggtgtattgaactgatgaggctgaacaaggac
cacgagggagtgcaagacccagaggttctgcgagaggcctggtcgaactggctgcaaaat
cgaaaaaagcaagacccgctggcgcagacggcggcactacgggcagctcaaagttttgaa
ttcactccagaggccctcacagagatggcatcggcagctcttactccggagaacgaacca
gcatcgcctgcagagcagcagagtgaccgcagcacagacaaagcgaccagcgataccggc
aaatccgaaaacagcaacaagccactgacaacttgggaggctggaggcatgatccaaccc
attcggccaaaccagtccgcacttcccctggacgccaaagacgaccaagcatgggaacac
atcttcaccatatggtgccaggacttggctgaaatcaactccaagaagattaagaccaag
gaaccgcgagacttcaacaggatcttgacggcttacaatcaatggattggtacgattgat
gggctgccgaagatcagagccacggcagccaggcgtaatgcgagcaattacctggcgaag
aacaagggcagggttgcctctttgctttctggtcggccgttagacgacgagcaagagaca
gaagaagaggagcccaaggagaaggaggccggggaggaaccagtcccagaaacagtggtt
gcggaggaaaccttgcctctcgcagcaccagtcaacgacgggaacgaggaggtcaaaaac
attccgctcacagaaggggaaatggcgtaccgggaccggtactttcccggccttgctccg
gacgctgtcttttgcgtcatgtgcgcttcttcggagcacaactcggccgagtgccccgag
atggcctgcaagttctgccacaaagaccacccttgctggacttgccctgctcgacaacgc
tgctccaagtgcaagcaacttgggcattctgtggccgagtgcaaagagcaactaatacta
gcccaggacgaaatggactgcgccctctgtggctcgcgagaccacattgagtatagctgc
gtcaacttgacgagaagcttccgacccaacccctccaacacccccaaagtccagtcctta
cccgtcttttgttaccgatgtggtgctgaggggcactatggtggcgactgcgggctcagc
gcgctggagaaaaagggcagcagcttcaacccattcaccaaggcgaacgcaagccagtac
gtggatccaaactcttcagagacggcccttgcctaccgcggcggtcaccggtctgcagca
gattacagatcaggtggcagaccggatcttggcaaaagcattgtccctcgccagcacatt
cagttcgagtcagacgacgacgatgatgatgagttcatacaacccattgttcaaaagccg
aggcggtctgggcacattaccttctctggatacagtgggaatggcagtcaaaaccaggag
aaacccagcgcgagatacccatccagcctccctccaaagcctccggcggtgtcggtgcaa
ccactaccgcgtgggccccctcctccgctacctccagggaacaattcttttgggagaaaa
cacggcggtggaggaagtaggggcaggggcagaagtggaggtgggggtaggggccgaggt
cgctattaa
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