Podospora pseudocomata: QC762_200540
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Entry
QC762_200540 CDS
T09797
Symbol
DPB2
Name
(RefSeq) DNA-directed DNA polymerase epsilon, subunit B
KO
K02325
DNA polymerase epsilon subunit 2 [EC:
2.7.7.7
]
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03030
DNA replication
ppsd03410
Base excision repair
ppsd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QC762_200540 (DPB2)
03410 Base excision repair
QC762_200540 (DPB2)
03420 Nucleotide excision repair
QC762_200540 (DPB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsd03032
]
QC762_200540 (DPB2)
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
QC762_200540 (DPB2)
Enzymes [BR:
ppsd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QC762_200540 (DPB2)
DNA replication proteins [BR:
ppsd03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
QC762_200540 (DPB2)
DNA repair and recombination proteins [BR:
ppsd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
QC762_200540 (DPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Motif
Other DBs
NCBI-GeneID:
87906851
NCBI-ProteinID:
XP_062746703
LinkDB
All DBs
Position
2
Genome browser
AA seq
818 aa
AA seq
DB search
MMIVSSPSKSLKKKQSQENTSPEKRKRPKPPPAPFFGARKNVAAAENPIPSSSPAFATPA
HPLRPFQPPAPAKAAILPIILPPPTLRPLAFRTFTKKHNLTLTSSALQELASFIGRHCGS
GWREEGLAEKVLEEVARGWKNRNGGVIVDGASPELKDILKNLEGNMSGGRIITGGNGQRG
GLSRQNSLMLEASDEADHSKTRLGLRPTSLAREDSQASFGMSGIGLGGEDDELDEDGSKD
ARRWLKVVSAFEQPRFTYNVAKKHFERITTPPSLLPPPSHKTDSFRNRYHIIHQRLLRNE
SFQTSAITSFSRSSSNASFRSHKITPIANLLGRHGTTHLLLGMLIVLPTGALAISDLTGA
ITLDLSHAAAIPHDSAWFTPGMIVLVDGIYEEEEESVGKGLSGSSGVGGTIGGRFQGFFI
GQPPCEKRRATLGVSGLDGMAGDEEHTIGGGFGWIDFLGVGSERAIGSKMRKLEQRLLRQ
QPAGQQRSRIVILGELNLDQPRSLQALKKVLSLYATDGEGETPMSFIITGNFTSCGVMAS
HGGGATTGTGGAGSIEYKEYFDALASTLADFPTLLTTATFVFVPGDNDGWVSAFGGGAAV
PLPRRGVPGLFTSRVRRTFAAANQEAGLTGEKKGGEAVWTSNPSRLSLFGPGHEVVVFRD
DISARLRRANVRLKGKEADGDGDVEMAGATQDNGDAMEVDGDEQQQEQRPSPVADPNAVP
YDVLAARKLVKTILDQGYLAPFRQSIRPVHWDYTSPLYLYPLPTAVVLVDTTAPPFCVTY
EGCHVMNPSSILVSGKKGVARWIEYEPGRTGKVRECTF
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcgtttccagtccctcaaagtccctcaaaaagaaacaaagccaagaaaacacc
agccccgaaaagcgcaaacgcccaaaacctcctcccgcccccttcttcggtgctcggaag
aatgttgcagcagcagaaaacccaatcccgtcttcctcgcctgctttcgcaactcccgcc
caccctttgcgacccttccaaccaccagcgcccgccaaagctgcaatcctacctattatc
ctgcccccgcctacgctccgaccccttgcctttagaacttttaccaagaaacacaatttg
actcttacatcctctgctctacaagaactagcctcttttatcggccgacactgcgggtca
ggatggcgagaggaagggctagcggagaaggtgctggaagaggtagctagggggtggaag
aacaggaatggcggggtgattgttgacggcgcaagcccagagctgaaggatatactgaag
aatttggagggaaatatgagcggtgggaggattatcacgggaggtaatggtcagaggggt
ggcctcagccggcagaatagtttgatgctggaagcaagtgacgaggcagaccactccaag
accaggttggggctgcgccctacgagtttggcaagagaggacagccaggctagttttggt
atgtcgggtattgggttgggcggggaagatgatgagcttgatgaggatggaagcaaagac
gcaaggaggtggttgaaggttgtgtcggcttttgagcagccgaggtttacgtataatgtg
gccaagaagcactttgaaagaataacaactcctccaagcctcctcccaccgccctctcac
aaaaccgacagcttccgcaaccgttaccacatcatccaccaacgtctgttgaggaatgaa
tccttccaaacctctgccatcacctccttttcccgctcatcctctaacgcttctttccgc
tcccataaaatcacccccatcgccaacttattgggtcgccatggcaccactcacctcctg
ctaggcatgctaatcgtcctccccaccggtgccctagccatatccgacctaaccggagcc
atcacccttgacctctctcacgcagcagccatcccccatgactcggcctggttcacacca
ggtatgatcgtcctggtagacggcatctacgaagaggaagaagaatccgtcggcaaggga
ctgtctggcagttcgggagtaggaggcacgataggaggccgattccaaggtttcttcatc
ggacagcctccctgtgagaaacggcgcgctaccttgggtgttagcgggctggatggcatg
gctggggacgaggagcataccattgggggtggattcggatggattgatttcctcggggta
gggagtgaacgcgccattggcagcaagatgagaaaactggaacagcggctgctacgacag
caacccgccggccagcaacgatcacggatcgtgatactcggtgagctcaaccttgaccaa
ccgaggagtttgcaagccctgaaaaaggtgctcagtttgtatgccaccgacggggaaggg
gagacaccgatgagctttatcattaccggcaatttcaccagttgcggggtgatggccagc
catggtgggggggctacgacggggacgggaggggcggggagtatagagtacaaggagtac
tttgacgcgctggcgtcgacgctggcggattttcccaccttgttgaccacggcgacgttt
gtgtttgtgcctggcgataacgacgggtgggtttcggcttttgggggaggggcggcggtg
ccgttgccgagaaggggggttccagggttgttcaccagccgggtgaggaggacgtttgcg
gcggcgaaccaagaggcgggattgacgggggagaagaaggggggggaggcggtgtggact
agtaatccgagtcggttgagtttgtttgggcctggtcatgaggtggtggtgtttagggat
gacatctcggctaggctgaggagggcgaatgtgaggttgaaggggaaggaggcggatggg
gatggggatgtggagatggctggggcaacgcaggacaatggggatgctatggaggtggat
ggggatgagcagcagcaggagcaacgaccatcaccggtggcagatccgaatgcggtgccg
tatgatgtgttggcggcaagaaaactggtcaagacgattctggatcagggctatctggct
ccattccgacagtcgatcaggccggttcattgggattacacttctccgctgtatctctac
ccgcttccgaccgcggtggtgctggttgatacgaccgctccaccattttgcgtcacctac
gagggctgtcatgtcatgaatccgagtagcattcttgtgagcgggaagaagggcgtggcc
aggtggatcgagtatgaacctgggaggaccgggaaagtgagggagtgcacattctag
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