Podospora pseudocomata: QC762_201600
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Entry
QC762_201600 CDS
T09797
Symbol
DBP5
Name
(RefSeq) RNA helicase required for poly(A+) mRNA export
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03013
Nucleocytoplasmic transport
ppsd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
QC762_201600 (DBP5)
03015 mRNA surveillance pathway
QC762_201600 (DBP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsd03019
]
QC762_201600 (DBP5)
Enzymes [BR:
ppsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QC762_201600 (DBP5)
Messenger RNA biogenesis [BR:
ppsd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
QC762_201600 (DBP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
CMS1
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
87906956
NCBI-ProteinID:
XP_062746832
LinkDB
All DBs
Position
2
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AA seq
464 aa
AA seq
DB search
MADLASRISKPEEGAAPQVDDPTEGANSVGIVENAYDVEVKLADLQNDAESPLFSVQSFE
QLGLPKAINDGLLAMNFKKPSKIQERALPLMISDPPTNMIAQSQSGTGKTAAFVLTCLAR
VDLAKPQQPQALLLAPSRELARQIQGVVQTIGQFCENLIVQAAIPGEVSRETGVRASIVV
GTPGTVMDLIRRRQFDVSQLKLLVIDEADNMLDQQGLGEQCVRVKTLLPKTIQILLFSAT
FPDNVHRFAQQFAPKANEIKLRHTELTVKGISQMYMDCPDEGKKYDVLCKLYGLMTIGSS
VIFVRTRESANEIQRRMEADGHKVSALHGAFEGQNRDALLDDFRSGRSKVLITTNVLARG
IDVSSVSMVINYDIPMKGPGAGVPDYETYLHRIGRTGRFGRVGVSISFVYDRRSYEALSN
IANHYGIDLVQLSPDDWDLTEKKVQDVIKSSRARPDYAPNALGN
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcgcgagccgcatctccaagccggaggagggcgctgccccccaagttgat
gacccgaccgagggtgccaatagcgttggcatcgtcgagaacgcctacgacgtcgaggtc
aaactcgctgaccttcaaaatgatgccgaaagcccgctcttctccgtccagtctttcgag
cagcttggcctccccaaggcgatcaacgatggccttttagctatgaacttcaagaagcca
tccaagatccaagagagagccctccctctcatgatcagcgaccctcctacaaacatgatt
gctcagtcccagtccggcaccggcaagactgctgctttcgttctcacttgcctggcgcgc
gtggacctcgccaagccgcaacagcctcaagctctccttctggctccgagcagagagctt
gcccggcaaattcagggcgtcgtccaaacaatcggtcaattttgtgagaacttgatcgtg
caggccgccatccccggcgaagtctcgcgtgagactggtgtcagggccagcatagtggta
ggaactccaggcaccgtcatggacctgatcagacgtcgccagttcgatgtgtctcagctg
aagctactcgttattgacgaggcggacaacatgttggaccagcagggtctcggtgagcag
tgtgtgcgtgtcaagactctactccccaagaccatccaaattcttcttttttccgccacc
ttcccagacaatgtccaccggttcgcgcagcagtttgcgcccaaggcgaacgagatcaag
ctccgacacacggagctgacagttaagggcatttctcaaatgtacatggattgcccggac
gagggcaagaaatatgatgtgctttgcaagctctacggtctcatgaccattggctcgtcc
gtcatcttcgtccgcactcgtgagagtgccaacgagattcagcgccgcatggaggctgat
ggccacaaggtgtctgcccttcacggtgccttcgagggccagaaccgtgatgctctcctc
gacgacttccgctccggtcgttccaaggttctcatcaccaccaacgtcttggctcgtggc
attgatgtgtccagcgtgtccatggtcatcaactacgacattccgatgaagggccccggc
gctggcgtgccagactacgagacctatcttcaccgtatcggtcgtactggtcgttttggt
cgtgttggcgtctctattagtttcgtctacgacagacgaagctacgaggccctttcaaac
attgccaatcactacggaatcgaccttgttcagctcagccctgacgactgggacttgact
gagaagaaggtgcaggacgtgatcaagtcgagccgcgcccgccccgactacgctcctaat
gcccttgggaattag
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