Podospora pseudocomata: QC762_202750
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Entry
QC762_202750 CDS
T09797
Symbol
SMC1
Name
(RefSeq) Structural maintenance of chromosomes protein 1
KO
K06636
structural maintenance of chromosome 1
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd04111
Cell cycle - yeast
ppsd04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
QC762_202750 (SMC1)
04113 Meiosis - yeast
QC762_202750 (SMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppsd03036
]
QC762_202750 (SMC1)
Chromosome and associated proteins [BR:
ppsd03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
QC762_202750 (SMC1)
Meiosis-specific proteins
Cohesin complex and associated proteins
QC762_202750 (SMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
ATG16
RasGAP_C
DUF3450
DUF1664
SbcC_Walker_B
Exonuc_VII_L
ABC_tran
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
87907070
NCBI-ProteinID:
XP_062746953
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Position
2
Genome browser
AA seq
1262 aa
AA seq
DB search
MGKLLRLELFNFKSYKGHHTLLFGDSYFTSIIGPNGSGKSNSMDAISFVLGIKSSHLRSS
HLRDLVYRGRVMKTSKIQDDGTAAPATNGHTNGVENGDDDGSLQRATRNDPKSAWVMAVY
EDDAGDEQSWKRTITSNGSSEYRINDRVVTAQQYNEALEAENILIKARNFLVFQGDVEAI
AAQSPQDLTRLIEQISGSLEYKAEYEKLQAEEEQALENQNFQLIRRRGINGEIKQYQEQK
KEAENFQKKTEERDEAVITHILWKLYHFQRVMDESSAQIQEHQENLKEFRRNVETFEKRL
EAARKEQTSVAREVHKIEKTIKAKEKSIEERENSLVPIDEKITQSSRDMEMLRKRIADLK
KLRDEKTAAVQKYTKDLSQVEKAHRQFEKQWAETLKKQGKELSDADRKEYDKLQAEAMKR
STDNRQKLDNLRRQLKSDEATFNSLGGRIDNFEASIDKLQGEVRGITERRDACQDFIRQI
TTEIDSKKKEYNNVQSERIRINNTHTELEEKLRDVLRKLEDADMGRRQNERETRTRNIIS
DLKRIYPGVRGRVGELCKPKQKKYDEAVITALGREFDGVIVDTEKTAVDCIQFLKDGRLP
SMTFIPLDNIKVNTSNSAVKGIAGARLTIDTIDFDPTLERAIAYACGGSVVCDNLEVAKE
IVYGKKIQVKAVTLQGYVIHKAGTMTGGRLNEDKGNKRRFEQVDVENLTRLAEKFKDDIA
KLPRAGRRGTEDNLQNEIASLEQRLRLQKSELAAFEKNLKSKLKELDNAKQELASFQPKF
DDKKGELERTRATVEKFEKAIQGVEDKIYADFCKRLGYENIRDYEAQQGTLEQEAAQKRQ
AFDIQKKSIQNSLSWETSQLSSSTERVKNMEQQLKRHQQEVQSYQEEKNSIEEAMGQDQD
ELEALSESLEVVRTRHAEKTKKVSEAKADLQGRSKDIDARLKEISNLESVVQKNSAGKFA
LLRRCKLEQIQIPLKQGSLDDIPNEDVLLQKDQDAMDVDMDEDAEADEVLEAAMDDYGIE
IDFDNLDDDLKDSDDDFEDKLQERISSLTTELEKLNPNMRAMERLESVKTRLQSTDKDWE
DSKTALKEARDAFSRVKQQRFELFNKAFSHIQEQITHVYKDLTRSDAYPLGGQAYLDIEE
DTETPYLSGIKYHAMPPLKRFRDMEHLSGGEKTMAALALLFAIHSYQPSPFFVLDEVDAA
LDNANVEKITKYIREHAGPGMQFIVISLKPTLFQHSESLVGVYRDQAANSSETLTLDLRK
YV
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggggaagctcctccgcctcgagcttttcaacttcaagtcctacaagggccaccacaca
ctcttgtttggcgactcctacttcacctccatcatcggtcccaatggctccggtaaatcc
aactcgatggacgccatctccttcgtcctgggcatcaagtcgtcacatctgcgatcgtcg
caccttcgcgacctggtttatcgcggccgggtcatgaaaacttcgaagatccaagacgac
ggcacagctgcaccagccaccaatggccacaccaacggcgtcgagaatggcgatgacgat
ggctctttgcaaagagcgacgagaaacgaccccaaatccgcctgggtgatggccgtgtac
gaagatgatgccggtgatgagcaaagttggaagcgcacgatcacgagcaacggttctagc
gagtaccgaatcaacgaccgcgtggttaccgcccagcagtacaacgaggccctcgaggcg
gagaacatcctgatcaaggcgcgcaactttttggtgttccaaggtgatgtcgaggccatc
gctgcgcagtcaccacaggacctcacacgcttgattgagcagatctcgggtagtttggaa
tacaaggccgagtacgagaaactccaggccgaggaagagcaggctctcgaaaaccaaaac
tttcaactcatcagaagaagaggcatcaatggcgagatcaagcagtatcaggagcaaaag
aaggaggccgagaacttccagaagaagacagaggaaagggacgaggccgttatcactcac
attctgtggaaactgtaccactttcaacgggtgatggatgagtcaagcgcccagattcaa
gagcaccaggagaatctcaaggagttccgccgaaacgttgagacattcgaaaagaggctg
gaggctgcgcgcaaggaacaaaccagcgttgcccgtgaggtccacaagatcgagaagacg
atcaaggccaaggaaaagagcattgaggaaagagaaaacagcctggtaccaattgatgag
aagatcacacagagctcccgggatatggaaatgctacgaaagaggattgccgatctcaag
aaactccgcgacgagaagacggcggcggtgcaaaagtacacaaaggacttgtcacaagtg
gaaaaagcgcaccgacagtttgagaagcaatgggccgaaacgctgaagaagcagggcaag
gagctcagcgatgcggacaggaaagaatacgacaagctgcaagcagaggcgatgaagagg
tcaacagacaatcgacaaaagctggataatctgcgacgacaattgaagagcgacgaggcg
acattcaacagtcttggtggcaggatagacaactttgaagccagcatcgacaaactgcag
ggtgaggtccggggcatcacagaacgccgggatgcttgtcaagacttcatcaggcagatt
acaacggagatcgactccaagaaaaaggagtacaacaatgttcagtcggagcgtattagg
atcaataacacccacactgaactcgaggagaagctccgcgacgtcctgaggaaactcgaa
gatgcggacatgggcaggcgacagaatgagagggagacaaggacgcgcaacattatcagt
gacctcaaacgcatctaccctggtgttcgcgggcgagttggtgagctttgcaagccgaaa
cagaagaagtacgacgaggcggtcatcactgcccttggtcgcgaattcgacggggtgatt
gtcgacaccgagaagacagctgttgactgcatccagtttctcaaggacggtcggctcccc
tccatgaccttcattccgttggacaacatcaaggtaaacacctcaaattctgccgtcaag
ggcattgcgggtgccagattgaccattgacaccatcgactttgatccaacgctggagcgg
gcgattgcctatgcgtgcggcgggtccgtggtctgtgacaacctcgaggtggccaaggag
attgtctacggcaagaagatccaggtcaaggctgtgacactgcaaggctacgtgattcac
aaggccggtaccatgacgggtggtcgcttgaatgaggacaagggcaataagcgccggttc
gagcaggttgatgttgagaatctcacgcgtttggctgagaagttcaaggacgatattgcc
aagttgccacgagcgggacggcgaggcactgaggacaacctccagaacgagattgcctct
ctggagcagcgtcttcgcctgcaaaagagcgagttggctgcctttgaaaagaatcttaag
agtaagctaaaggagctcgacaacgcgaagcaggaactggcgagcttccagcccaaattc
gacgacaagaagggcgagctggagcgtacccgggcaaccgtggagaagttcgaaaaggcc
attcagggcgtcgaagataagatctacgccgacttctgcaagaggcttggatatgagaac
attcgtgactacgaggcccagcaagggactttggagcaggaggctgcccagaagcgccag
gcatttgacatccagaagaagagcattcaaaacagcttgagctgggagacgtcacagctc
agctccagcactgaacgagtaaagaacatggagcaacaactcaagcggcaccaacaggaa
gtccagtcataccaagaggaaaagaacagcattgaggaagccatgggccaagaccaagac
gagctcgaagccctctccgaaagcctagaggttgtccggaccagacacgccgaaaagacc
aagaaggtctcggaagccaaagccgacctccaagggagaagcaaagacatcgacgcccga
ctaaaagaaatctccaacctcgagtccgtcgtccaaaagaacagcgctggcaagttcgcc
ctcctgcgccgctgcaagttggagcagatccagatcccccttaagcagggttctctagac
gacatccccaacgaagacgtcctcctccagaaagaccaagacgccatggacgtcgacatg
gacgaagacgccgaggcggacgaggtcctcgaggcggccatggacgactacggcatcgaa
atcgactttgacaacctcgacgacgacctcaaagactcggacgatgactttgaagataag
ctccaagagcgcatatcttccctcacgaccgagctcgagaagctcaatcccaacatgcgc
gccatggagcgtctcgagtcggtcaagacccggctccagtcaactgacaaggactgggaa
gacagcaaaaccgccctcaaagaagcccgcgacgcgttttctagagtcaaacagcagcgg
ttcgagctttttaacaaggccttcagccacatccaagagcagatcacgcacgtgtacaag
gatctcacgcggagtgatgcgtaccccttgggtggacaagcctatctcgacatcgaggag
gacacggagacgccgtacctatccgggatcaagtaccacgccatgccgccgctcaagcgc
ttccgggacatggagcacctgtcgggcggcgaaaaaacaatggcggcgctggcgctgttg
tttgcgattcatagctaccagcccagcccgttctttgtgttggacgaggtggacgccgcg
ctggataatgcgaatgtggaaaagatcacaaagtacatccgggagcatgccgggccgggg
atgcagtttattgtgatcagcttgaagccgacgctgtttcagcacagcgagagtcttgtg
ggggtgtatagggaccaggctgcgaatagttcggagacgttgacgctggatttgaggaag
tatgtataa
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