Podospora pseudocomata: QC762_202820
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Entry
QC762_202820 CDS
T09797
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03030
DNA replication
ppsd03410
Base excision repair
ppsd03420
Nucleotide excision repair
ppsd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QC762_202820 (RFC4)
03410 Base excision repair
QC762_202820 (RFC4)
03420 Nucleotide excision repair
QC762_202820 (RFC4)
03430 Mismatch repair
QC762_202820 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsd03032
]
QC762_202820 (RFC4)
03036 Chromosome and associated proteins [BR:
ppsd03036
]
QC762_202820 (RFC4)
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
QC762_202820 (RFC4)
DNA replication proteins [BR:
ppsd03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
QC762_202820 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
QC762_202820 (RFC4)
Chromosome and associated proteins [BR:
ppsd03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
QC762_202820 (RFC4)
DNA repair and recombination proteins [BR:
ppsd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
QC762_202820 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
QC762_202820 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_16
AAA_22
nSTAND3
RuvB_N
RCF1-5-like_lid
Viral_helicase1
AAA_3
DNAX_ATPase_lid
Mg_chelatase
DNA_pol3_gamma3
Rad17
Gp44_lid
MeaB
AAA_24
NTPase_1
AAA_11
AAA_assoc_2
KTI12
AAA_19
AAA_18
Motif
Other DBs
NCBI-GeneID:
87907076
NCBI-ProteinID:
XP_062746959
LinkDB
All DBs
Position
2
Genome browser
AA seq
357 aa
AA seq
DB search
MPAATTKKPEANGESSTAAYKAQTANPSGNPTYELPWVEKYRPVFLDDVVGNTETIERLK
IIARDGNMPHVIISGMPGIGKTTSVLCLARQLLGDAYKEAVLELNASDERGIDVVRQRIK
GFAQKKVTLPQGRHKLVILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPL
QSRCAILRYAKLTDEQVVKRLLQIIDAEGVKFSEDGLAALVFSAEGDMRQAINNLQSTWA
GFGFVSGDNVFKVVDSPHPIKVQAMLKACYEGNVDSALDTLRELWDLGYSSHDIISTMFR
VTKTIETLSEHSKLEFIKEIGFTHMKVLEGVQTLLQLSGCVVRLCRLNMDPKRFESR
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgcaacgacaaaaaagccggaagccaacggcgagtcctccaccgcagcctac
aaagcccagacagccaaccccagtggcaacccaacctacgagctcccatgggtcgaaaaa
taccgccccgttttcctcgacgacgtagtaggcaacaccgaaaccatcgagcgcctcaag
atcatcgcccgcgacggcaacatgccccacgtaatcatctctggcatgcccggcattggc
aagaccacctccgtcttgtgtctagcccgccaactcctcggggacgcctacaaagaagcc
gtgcttgaactcaacgcctctgacgagagaggtattgatgttgtgaggcagcgtatcaag
gggtttgcgcagaagaaggtgaccctcccgcaagggagacataaacttgtcatcttggac
gaagcggatagcatgacgagcggtgcccagcaggcgttgagacggacgatggagatttac
agcaatacgacgaggttcgccttcgcctgcaaccaaagcaacaaaatcatcgaacccctc
cagtcgcgctgcgccattctccgctatgcgaaattaacagacgagcaagtcgtcaaacgc
ctcttgcaaatcatcgatgcggagggtgtcaagttcagcgaggatggcctcgcggcgttg
gtgtttagtgcggaaggggatatgcgccaggcgatcaacaacctgcagtcgacgtgggct
gggttcgggtttgtctcgggggacaatgtcttcaaggttgtcgacagtcctcacccgatc
aaagtgcaggctatgctcaaggcttgttacgaggggaatgtggactcggcgcttgacacg
ttgagggagctgtgggatttggggtacagcagtcatgatattatctcgacgatgtttagg
gtgaccaagacaatcgagacgttgagcgagcatagcaagttggagtttatcaaggagatt
gggtttacgcatatgaaggttttggagggggtgcagacgctgctgcagttgagtgggtgt
gtggtgaggttgtgtaggttgaatatggatccgaagaggtttgagagtagatag
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