Podospora pseudocomata: QC762_203810
Help
Entry
QC762_203810 CDS
T09797
Symbol
TAF5
Name
(RefSeq) Transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
QC762_203810 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsd03021
]
QC762_203810 (TAF5)
03036 Chromosome and associated proteins [BR:
ppsd03036
]
QC762_203810 (TAF5)
Transcription machinery [BR:
ppsd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
QC762_203810 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
QC762_203810 (TAF5)
Chromosome and associated proteins [BR:
ppsd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
QC762_203810 (TAF5)
STAGA complex
QC762_203810 (TAF5)
TFTC complex
QC762_203810 (TAF5)
SAGA complex
QC762_203810 (TAF5)
SLIK complex
QC762_203810 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
TFIID_NTD2
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_SCAP
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_WDR75_1st
LisH
Beta-prop_EIPR1
Beta-prop_TEP1_C
eIF2A
WD40_RFWD3
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_IFT140_2nd
Beta-prop_IFT122_1st
VPS8_N
RMC1_N
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
87907182
NCBI-ProteinID:
XP_062747075
LinkDB
All DBs
Position
2
Genome browser
AA seq
771 aa
AA seq
DB search
MSNPPPQPTGQAPPSASYSGQPQSAGGAPAPSQPATTSTPSAQNLNQIVTDYLKKKGFTK
TEAVFRIETAHLGPDGRPANRGQDPADPKRYLKAFILIKNWIDNNLDIYKFELEKLLWPI
FVYSYLELVGQGYHEDSKTYLATLRPHFETVHHDTLRLLSTVTLPQHMNEDPTIKLYKEN
KYRIPLNNTLTLNLFQFLQRDSDSGGSTIIYILQTFCAIDNSSRGPIEPYSFEAVYRRTQ
NRELDEIDAQEGIPGVFTGVANRDVLDNTAKLKLGPLPMEPELRDDVRIELEEEDQSHPP
VDGRPSLVEVFDKRIKQEEGDDVPSRADLPLPQSRARDVVMEMQKVRENRDRFLIEGRTG
GVGVPVSVCMFTFHNTLGNVSCMEFSNDHQLVAVGTSDSYIRVWDLEGKPLRTTLDNEKD
LKVNNRKLIGHSGPVFGISFSDSTASLDRNPYLEGSGKPVDTSAKLLLSCSMDGQVRLWS
LESWSCLCIYRSHDGPIFRVLWGPHGHYFATAGWDKTVRIFTQDHASAQRIMVGHDTPIS
AIAWHPNGTYVFSASDETDKSIRMWSLTTGGCVRIYTGHADYISALQCAPNGKILASADT
GGNIFLWDIEKSKRIKRMRGHGKGGIPSLSFSAESNILVSGGLDGTVRVWDVELPADPSK
ANPLAGGSAQPGQQPDGITVAGDSIAVAGSGDNRSITVGGQAAQVTGASTSGAGSGSGGG
GGGGSGKKKSKEVQVTPDQISAFPTKKTPVLKVAFTRMNLVVAGGCYDPDR
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaccccccacctcaaccaacaggtcaggccccgcctagcgcctcatattcgggg
cagccacagtcggcaggtggtgcacctgctccctcacagccggcgacgaccagcacccca
tcagcacagaacctcaatcagattgttaccgactatctgaagaaaaagggtttcaccaaa
actgaggctgtctttcgcatcgagactgcccatctcggtccagatgggagaccagcaaac
cgaggccaagatcccgccgacccaaagaggtacctcaaggcgttcattctcatcaagaac
tggatcgacaacaacttggacatctacaagtttgagcttgagaagcttctgtggcccatc
ttcgtctactcctacctggagcttgttggccagggctaccatgaggattcaaaaacttat
cttgcgactctccggccacactttgagacagttcaccatgacacactgaggttgctgagc
actgtcaccctgccacagcacatgaacgaggaccccacgatcaagttgtataaggagaac
aaataccggattccgctgaacaacactctgaccctcaacctgtttcagttcctccagcgc
gactccgattcgggcggaagcaccatcatctacattcttcaaaccttctgcgcaatcgac
aacagctcacgtggtccgatcgagccttatagtttcgaggccgtttaccgtcggacccaa
aaccgtgagttggacgagattgacgcgcaagagggcattcccggcgtcttcactggcgtt
gcgaatcgcgacgtcctcgacaacacagccaagttgaaactaggcccattgcctatggaa
cccgagcttagagatgacgttcgcattgaacttgaggaagaagaccagtcgcacccaccg
gtggacggccgacccagcttggtcgaagtgtttgacaaacgcattaagcaagaagagggt
gacgacgttccatcgcgagctgacctacctctcccacaatcgcgagccagggatgtcgtc
atggagatgcaaaaggtgcgcgagaaccgcgacaggttcctgattgagggtcgtactggg
ggagttggagtgcctgtgtcagtttgcatgtttacctttcataacacgctcggaaacgtc
tcatgcatggaattctccaacgatcaccagctagttgctgtgggcacctctgattcctac
attcgcgtctgggatctggagggcaaaccgcttcggacaacgctggacaatgaaaaagac
ctcaaggttaacaataggaagctgattggccattcgggtcctgtctttggtatctccttc
tcagattccaccgcttcccttgaccggaatccctaccttgaagggtccgggaagccggta
gacaccagcgcgaagctgttgctgtcttgttctatggatggtcaggttcgcctgtggtca
ctcgagtcctggtcttgcctctgcatctacaggtctcacgacggtcctatttttcgcgtg
ctttggggtccacacggacactactttgccacggccggatgggacaagacggtccgtatc
ttcacccaagatcatgcttcggctcagcgcattatggtcggccatgacaccccgatctcg
gccattgcgtggcatcccaacggaacatatgtcttctcggcctctgacgaaactgacaag
tcgattcggatgtggtctctcacaactggcggctgcgttagaatttataccggacatgcc
gactacatcagtgccttgcagtgtgctcccaacggaaagattcttgccagcgccgacaca
ggtggcaatattttcctttgggatatcgagaagagcaaacgaatcaagaggatgcgtggc
cacgggaagggcggcatcccatctctcagtttcagtgccgagtcgaatattctcgtctct
ggcgggcttgacggcacggttcgagtttgggatgtcgagctgccagccgaccccagcaag
gcgaatcccttagccggcggttcagcccagccaggtcaacagcctgatgggataactgtt
gccggtgacagcattgcggtggcggggtctggtgacaatcggtccatcactgtcggcgga
caggctgctcaggttacaggtgcgagcacctctggggctggtagtgggagtggcggtgga
ggtggaggtgggtctggcaagaagaagtcgaaagaggttcaggttactcctgatcaaatc
agcgcgttccctaccaagaagactccggtcttgaaggtggcgtttacacggatgaacttg
gtggtggctggagggtgctatgaccctgatcgttag
DBGET
integrated database retrieval system
