Podospora pseudocomata: QC762_205940
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Entry
QC762_205940 CDS
T09797
Symbol
KIN28
Name
(RefSeq) TFIIH complex serine/threonine-protein kinase subunit kin28
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03022
Basal transcription factors
ppsd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
QC762_205940 (KIN28)
09124 Replication and repair
03420 Nucleotide excision repair
QC762_205940 (KIN28)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ppsd01001
]
QC762_205940 (KIN28)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsd03021
]
QC762_205940 (KIN28)
03019 Messenger RNA biogenesis [BR:
ppsd03019
]
QC762_205940 (KIN28)
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
QC762_205940 (KIN28)
Enzymes [BR:
ppsd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
QC762_205940 (KIN28)
2.7.11.23 [RNA-polymerase]-subunit kinase
QC762_205940 (KIN28)
Protein kinases [BR:
ppsd01001
]
Serine/threonine kinases: CMGC group
CDK family
QC762_205940 (KIN28)
Transcription machinery [BR:
ppsd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
QC762_205940 (KIN28)
Messenger RNA biogenesis [BR:
ppsd03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
QC762_205940 (KIN28)
DNA repair and recombination proteins [BR:
ppsd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
QC762_205940 (KIN28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Kinase-like
ABC1
Motif
Other DBs
NCBI-GeneID:
87907398
NCBI-ProteinID:
XP_062745605
LinkDB
All DBs
Position
2
Genome browser
AA seq
422 aa
AA seq
DB search
MAVSPLVYPPQPSLSSPHKRQPPSSQQTSSNGTPSGAPLSAAKPILPLPRQDPSSSTTPP
PSLTLDPIEQMNELEKRKYVKGRKLGEGTYANVYLGHSRSDPTSLVAIKKIKVQAQYNDG
LAPDAVRELKHLQELRGHPNIIQLYSVFSSKDQNLNLVLEYLPLGDLEMLIKDVDRVRYG
AGDIKAWMGMLTRAVWFCHENYVLHRDIKPNNLLIAADGEVKLADFGLARGFSDPGWRMT
ATVITRWYRPPELLFGARHYSGAVDIWSVGMVFAELIIRTAYLPGNTEVEQIALICKQIG
TPTEDNWPGVTQLSQYTVPSEVTPVWGKEAYMGRFGAVGSEGVDLLVKTLALDPKKRITA
REMLEHRWWRTEPKPTRKEDLPRKSGGGEEKMGADLKRRNGVLEGEDRGSKVARKLDFGA
MK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggccgtctcccccctagtctaccccccccaaccatccctcagctcccctcacaaacgc
caacccccctcctctcaacaaacctccagcaatggcaccccaagcggtgctcccctctca
gcagccaaaccaatcctccccctcccccgacaagacccctcctcctccaccaccccccct
ccctccctcaccctcgacccaatcgaacaaatgaacgagctcgaaaagcgcaaatacgtc
aaaggccgcaaactaggcgaaggcacctacgccaacgtctacttggggcactcccgctcc
gacccaacctccctcgtcgccatcaaaaagataaaagtccaagcccaatacaacgacggc
ctcgcccccgacgccgtccgagagctcaaacacctccaagaactccgcggccacccaaac
atcatccagctctactccgtcttctcctccaaagaccaaaacttgaatctagtactcgag
tacctccccctcggggacctggaaatgctcatcaaggacgtcgacagggtccggtacggc
gcgggggatataaaagcctggatgggcatgctcacgagggcggtctggttctgccacgag
aattacgtcttgcacagggatatcaaaccaaacaatttactcatcgccgctgatggggag
gtcaagctcgctgatttcggtctggcgagggggttctccgatccggggtggaggatgacg
gccacggtcatcacccgctggtaccgccctcctgagctcctctttggcgcaaggcactac
tcgggcgcggtggatatatggtctgtgggcatggtgttcgccgagctgatcattcgaacc
gcgtatctcccgggcaacacagaggtggaacagatcgcgctgatctgcaagcagattggg
acgccgacggaagataactggccgggcgtgacgcagttgagccagtataccgtccccagc
gaggtgacgcctgtgtggggaaaagaggcgtacatgggacggttcggggcggtggggtcg
gagggggtggatttgttggtcaagacgttggcgttggatccgaagaagaggatcacggcc
agggagatgctggagcacaggtggtggaggacggagccgaagccgacgagaaaggaagat
ttgccgaggaagagcggggggggggaagaaaagatgggggcagatttgaagaggaggaat
ggggttttggagggggaggatagggggagcaaagtggcgaggaagctggattttggggct
atgaaataa
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