Podospora pseudocomata: QC762_206040
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Entry
QC762_206040 CDS
T09797
Symbol
SSD1
Name
(RefSeq) Translational repressor
KO
K18748
protein SSD1
Organism
ppsd
Podospora pseudocomata
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsd03019
]
QC762_206040 (SSD1)
Messenger RNA biogenesis [BR:
ppsd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
QC762_206040 (SSD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
Dis3l2_C_term
CSD2
Rrp44_CSD1
DUF6024
DUF5774
Motif
Other DBs
NCBI-GeneID:
87907408
NCBI-ProteinID:
XP_062745615
LinkDB
All DBs
Position
2
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AA seq
1368 aa
AA seq
DB search
MDQQQQQQQSQQSQAQPGGVPGPTGRRLHIAHRRSPSELTPLMSMYANPGMEQLAIAQQI
ELLQQQQQQLQATYQHMGMLQNAQALGQGGFNPLQQAMPNLSPQTGFQFPNQLQQQNVSL
APPTQPLSHRRNQSAIPNMGMGGPPPAPSAGASGSAFGNFENLQPAQRGENAGGRGGRGG
GAGGGHQRRHSLALADAKKAAEIAQQKRTTSGFQFPAPGASGSAEKTETDAKGASAAPAP
APVAAPADSQIAQGSSFRGGRGGGHGRSQSMAVGAGGRGGRGGGMNFSGDDLQRRGGGAG
GGHARTGSRNFDGNWRNQSQNQNQGQDQSAGAGQNQGFQPGHRSRGSINHQSISGLGAFQ
YAGQPQLMQLPGQMMVPGMFPGQQLNPMQLNQLQALQIAQMSGQHMAGLGASQHAPQMAA
QQPQQQQRKTLFTPYLPQATLPALLGDGQLVSGILRVNKKNRSDAYVSTQDGLLDADIFI
CGSKDRNRALEGDLVAVELLDVDEVWSQKREKEEKKKRKDITDTRSGSTAGTNQGSTNDD
NGTEGGLRRRGSLRQRPTQKKNDDVEVEGQSLLLVEEEEINDESKPLYAGHIVAVIERVA
GQMFSGTLGLLRPSSQATKEKQEAERAARDGSNSRHHDNRAQEKPKIVWFKPTDKRVPLI
AIPTEQAPRDFVEKHQDYADQIFVACIKRWPITSLHPFGTLVEKLGKMGDLKVETDALLR
DNNFSSDEFSDAVLRSVNPPDWTIAKEDEAALGSRRDFRGEKVFTLDLESTAELGNGVHV
KTLSDGKVEIGVHVPDVTHFVKPASLVDREAKKRGTAVQLMNRFCALLPPKLSGEYCALT
PEEDRLTVSVVFHVNPHTGAVAEGDTWIGKGIVKSGGKLSLSQIDEALSNQAGFSHPVAG
AKDIQLLSLLAQKFHEARLGAGGEPIAPLRLLQQLDDENIPVKHNVFDSSLATELVEELM
HKTNTYVAQRLAAALPEKALLRRHAPPNSRRLQTFVERMSALGYEIDSTSSGSLQNSLFR
VDDSDIRKGMETLLLKSMQRAKYFIAGKTAQHLWSHYALNVPLYTHFTAPTRRYADILVH
RQLEAVLTETEYTEDLENLIKTVESCNTKKDSAQNAQEQSVHIEACRTMDKVRQETNGDL
ISEGIVVCVYESAFDVLIPDWGFEKRVHCDQLPLKKAEFRKEKRVLELYWEKGVPSSAYV
PEDERPRAGGASQRVSNAMAAARQAEEAERVKKEREEAARKQTETGTIAPESADALFDDD
EDNASDITEAMAGASLAERPTQSVPGSPTRSSSTLHRTRSDSKVPVTEAPETRLTNKEKY
LKLFKLREEGGEYIQDVTEMTRVPVILKTDLSKSPPCLTIRSLNPYAL
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atggatcaacagcagcagcagcagcaatcacagcaatcccaggcccagcctggaggtgtg
cctggccctaccggccgccgtctgcatatcgcccatcgccgtagcccttcggagttgacc
ccgttgatgagcatgtatgcgaatcccggcatggaacaactggccattgcgcagcaaatc
gagctgctgcaacagcagcagcagcagctccaagctacttatcagcacatgggcatgttg
cagaacgctcaggctctgggccaaggcggcttcaaccctctccagcaggccatgcccaac
ctttcgccgcagaccggcttccaattcccgaaccagcttcaacagcaaaatgtgtccttg
gcccctcccacacagccactctcacatcgccgtaatcagtcggctattcccaacatgggt
atggggggcccccctcccgccccttccgctggagcctcgggatctgcctttggcaacttt
gaaaacctccaacccgcccagagaggagaaaacgctggcggccgtggtggtagaggtggc
ggcgccgggggtggtcatcagagacgtcactccctagccctcgctgacgccaagaaggcc
gccgaaatcgcccagcagaagcgcaccacctccggcttccagttccccgcccctggtgct
tcgggctctgctgaaaagacagaaaccgacgcaaagggtgctagtgccgccccggcgccc
gctccggttgctgccccagccgacagccagatagcacaaggttcctccttccgtggcggt
cgcggcggcggtcatggccgcagccagagcatggctgtcggcgccggtggtcgtggagga
cgtggtggtggtatgaacttttctggcgacgacctccaacgccgcggtggtggtgctggc
ggaggtcacgcccgcactggatcccggaactttgatggcaactggcgcaaccagagccag
aaccaaaatcagggccaggaccagtctgccggcgccggtcagaaccaggggttccagccg
ggccatcgcagccgcgggtccatcaaccaccagtccatctctggtctaggcgctttccag
tatgctggccagcctcagttgatgcagctccctgggcagatgatggtccccggcatgttc
cctggtcagcagctcaaccctatgcagctcaaccagctgcaggctctccagattgctcag
atgagcggccagcacatggctggtcttggggccagccaacacgctcctcaaatggctgcc
cagcagccccaacagcaacagcgcaagacgcttttcactccttacctcccccaggctacc
cttcctgctctcctcggcgacgggcagctggtttcgggtatcctccgggtcaacaagaag
aaccgtagtgacgcttatgtgtcgacccaggatggtctgctcgatgccgatatctttatt
tgcggcagcaaggatcgcaaccgcgcccttgagggtgacttggtggctgtcgagctcctt
gatgtcgacgaggtgtggtctcagaagcgcgagaaggaggagaagaagaagcgcaaggac
atcaccgacactcgctctgggtccaccgccggaacaaaccagggcagcactaatgacgac
aatggcaccgaaggtggcctccgccgccgtggcagtttgagacagcgccctacccaaaag
aagaatgacgacgttgaagtggagggtcagagcctccttctcgtcgaggaggaggagatc
aacgacgagtccaagcctctttatgccggccatattgttgctgtcattgagcgtgtggct
ggtcagatgttctccggcaccctgggtctcctccgtcccagcagccaggctaccaaggag
aagcaggaggccgagcgcgccgctcgtgatgggtccaactctcgccatcacgacaaccgc
gctcaggagaagcccaagattgtgtggttcaagcctactgacaagcgtgttcccttgatt
gccattcccactgaacaggctcctcgtgactttgttgagaagcaccaggactacgccgac
cagatcttcgttgcctgcatcaagcgctggcccatcacctcgctccatcctttcggtact
ttggtcgaaaagctcggaaagatgggtgatctcaaggttgaaacggatgctcttttgcgt
gacaacaacttctcttcggatgagttctccgatgctgttctgcgcagtgtgaaccctccg
gactggactatcgcaaaggaagatgaggcggccctcggctcccgcagagacttccgtggc
gagaaggtcttcaccctcgacctcgaaagcactgccgagcttggaaacggtgtccacgtc
aagacactgtctgatggcaaggtcgagattggtgttcacgttcccgatgtcactcacttc
gtgaagccagcttcgctcgtcgacagagaggccaagaagcgcggcaccgccgttcagctc
atgaaccgtttctgcgctcttctcccacccaagctgtccggcgaatactgtgccctgact
cccgaggaggatcgcttgaccgtcagcgttgtcttccacgtcaacccacacactggcgct
gttgccgaaggcgacacctggattggaaagggcattgtcaagagcggcggcaagttgtcg
ctgtctcagattgacgaggctctctctaaccaggccggcttcagccaccccgttgctggc
gccaaggatatccagcttctcagcctccttgcccagaagttccacgaggcacgcctcggt
gctggcggtgagcctatcgcccctcttcgtctgctccagcagcttgacgatgagaatatc
ccggtcaagcacaatgtctttgatagcagcttggccaccgagctcgttgaagagctcatg
cacaagaccaacacctacgtcgctcagcgcttggccgctgctcttcccgagaaggccctt
ctgcgccgccacgcccctcccaactctcgccgtctgcagacttttgtggagcgcatgtcc
gctctgggctatgagattgattcgaccagcagcgggtctctccagaacagcctgttcaga
gtggacgattctgacatcagaaagggcatggaaacactgctcctgaagtcgatgcaacgc
gccaagtactttattgctggcaagactgcccagcacctttggtctcattatgctcttaat
gtgccgctctacactcatttcactgccccgacccggcgctacgccgacattttggttcac
cgtcagcttgaagctgttcttaccgagaccgagtacaccgaagacttggaaaatctcatc
aagacggtcgagtcttgcaacaccaagaaggactctgctcagaatgctcaggagcagagc
gtccacatcgaggcctgccgtaccatggacaaggtccgccaggagaccaacggcgatctc
atcagcgagggtatcgtcgtctgtgtctacgagtcggcgtttgatgtgctcatccccgac
tggggcttcgagaagcgcgtccactgcgaccagctccctctcaagaaggccgagttcaga
aaggagaagcgtgttcttgagctctactgggagaagggtgtccccagctcggcttacgtc
cccgaggacgagaggcccagggctggcggtgcctcgcagagggtttccaacgctatggcc
gctgcccgccaggccgaggaggctgaacgtgtcaagaaggagcgcgaggaggctgctcgc
aagcagaccgagactggcaccattgcgcccgagtcggccgatgctctctttgacgatgat
gaggacaatgcttctgacatcaccgaggccatggctggcgcttctcttgccgagcgcccc
actcagagcgtgcccggctcgcctactcgctcttcgtcgactctgcaccgcactcggtcg
gattccaaggtgccggttaccgaggcgcccgagactcgccttaccaacaaggagaagtat
ctcaagcttttcaagctgagagaggagggcggggagtacatccaggatgttaccgagatg
acgcgcgtgccggtcattctcaagacggatctcagcaagagcccaccttgcttgactatc
cgctctcttaacccttatgctttgtaa
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