Podospora pseudocomata: QC762_206230
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Entry
QC762_206230 CDS
T09797
Name
(RefSeq) uncharacterized protein
KO
K17263
cullin-associated NEDD8-dissociated protein 1
Organism
ppsd
Podospora pseudocomata
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppsd04121
]
QC762_206230
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppsd04147
]
QC762_206230
Ubiquitin system [BR:
ppsd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
QC762_206230
Exosome [BR:
ppsd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
QC762_206230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP120
HEAT
HEAT_2
HEAT_EZ
Adaptin_N
Cnd1
CEP104-like_TOG
PDS5
MMS19_C
UTP20_N
CLASP_N
WAPL
Motif
Other DBs
NCBI-GeneID:
87907426
NCBI-ProteinID:
XP_062745633
LinkDB
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Position
2
Genome browser
AA seq
1345 aa
AA seq
DB search
MASTIPTNPSPQTLNILLQKIGDPDPDFRFMALNDILTVFNIARTDFLTHDYNTSARTVD
AIVKALDDTNGEVQGQAIKCIGPMVQKITDQLYIPMMEKLATLKLKNSQDTSIPSLAMRA
MVAALPRPVPGVSNNQVLEAYSAISKALIPRLIGRSGSTPGLLATENESSDYVDVLIEVV
KSFGPMLQIYEIEVIHNSIVTLMENEKGNSVLKKRAVVAISMLAHYLADDHLAQFIKRAI
HVLNHPSLTGVTRRLYITVLGSMARSVPQRLGKHLPELAPILLRALSEEELEAQLEEISE
GGEASLEFSEVREAALVALEAFLASCPNQMRPYTDESIEACLRYLRFDPNYALDDDEDME
DEEEEDDGFDDDDEIEADGGFDDDDDASWKTRRCAAKALHTLISTRSSGDLLDSGVLYTK
VAPALVKRFDEREENVRLEVLSAMALLVRKTGEGVIPEFSLESPSEFVHQQPPSRKRRRQ
SSAGGASALANMIAPASLAGTGLASPTLEKVPATGPRADLAALTPSIIKSLAKLLKGKLI
PTKQASINLLDDIITVQRGGLGQYFDQIFGPIIEAIKPSSVASTSASLTSAGGSASATAT
TLRIAALRLTSDIVKNHSSAVLQPHLPSLVTGLVSVAHDRFYKISSEAIQTAEEVVKAIT
PPRSRLTAQKFKGELQKLYDVIIDRIRDNDADAEVRQKAIHALGTLLARTTGNEGSGLLS
EDKRKAALGFLLERLRNETTRIAAVRAIDTVAAYSLGSVQLEPEWIRQVAHELAAQLRKA
NRALRGSSIVALKHLILSPSTKGTLDPDSAQAIVNALIPVITSNDAQLLAPGLLILAHLT
QEMPQVVITPQLVTVICGLVKTTVPGTVLDSLLILVTNAGQAGQGKSLMQGLLRDVGVAG
DPSVVGKVIGTLLVASGDSAGVQLDNFVSEVKNNTQDQARVSLALAVIGEAGLRLGASFP
VPPELFLNQFSNEYDKVSLAAAVALGRAGAGNVSVYLPVILQAMGKKGNTQYLLLQSIKE
ILQQAALSSTDISRYSGTIWDHILALTDAEDNKAVCAECAGRMVIIDPKTYMPKLEALLK
DKSPVLRATAVQALRYTLPDDNEAFDAVLRSSLFDMLKTVLEDPELEIRRHALSTLNSAA
HNKPELIMGRFNQLIPYVMKETVINPDLIREVTLGPYKHKIDDGLEVRKVAYETLYALME
TAFSRISIIDLYDRIIAGLSDEHDIRALCNLIVSKLVYLDSAETIRRLDPIAAAFRATLS
TKLKNTAVKQEIEKQAEANRAVLRVTLLLGDKLKSELATAGGAATGGHEVWTSYWDWVNK
DFNEQLKAVREEIKSLSWNTISASS
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcacaatccccacgaacccgagccctcagacgctcaatattcttctccagaag
atcggtgatcccgacccagatttccggttcatggcactgaacgacatcctgacagttttc
aacattgcgcggaccgactttttgacccacgactataacacatcggcgcggacagtcgac
gctatcgtgaaagcactggatgataccaatggggaggtccagggccaggctatcaaatgt
atcggccctatggtgcagaaaatcacagaccagctctacattcccatgatggagaagctg
gcaaccctgaagctcaaaaactcacaggacacctcgatcccatctcttgccatgcgggcc
atggtagccgccctcccccgcccagtacctggcgtgtccaacaaccaggtgctcgaagcc
tattcggccatcagtaaggctttgatcccaaggcttattggccgcagtggttctacgccg
gggctgttggccaccgaaaacgaatcttccgactacgttgacgttctgatcgaggttgtc
aagtctttcggacccatgcttcagatttacgaaattgaagttattcacaactcgatcgtt
accctcatggagaatgaaaagggcaattctgtgcttaagaagcgggcggtggtggccatt
tctatgctcgcccactacctagcggacgaccatctagcacaatttatcaagcgcgccatt
catgttctcaaccatcctagcctgacgggagtcacccgtcgtctctacatcacggttctc
ggctccatggctcgctcagtacctcagcggcttgggaaacaccttccagaactggcacca
atccttcttcgtgctttgagtgaggaagaattggaggcgcagcttgaggagatcagcgag
ggcggggaagcgagcttagaattcagcgaagttcgcgaggctgcgttggtagctctagaa
gcctttctcgccagttgtcccaaccagatgcgcccctataccgacgaatccattgaggct
tgcctccgctatctccgattcgaccccaactatgcgctagacgatgacgaagatatggag
gatgaagaagaggaggacgatgggttcgatgacgatgacgagatcgaggccgatggcggt
ttcgacgatgacgacgatgccagttggaagactagaaggtgtgccgcaaaggcgttgcat
acgttgatctcaactcgtagcagcggcgatctgcttgacagcggagtgctctacaccaag
gtggcgccagctctagtgaagagattcgacgagcgcgaagagaatgtacgactggaagtc
ctctccgccatggctctgctcgttcgcaagaccggggagggcgtcatccctgagttctcc
cttgaaagccccagcgaattcgttcatcagcagcctccgagcaggaaacggagacggcag
agcagtgcaggcggggcttcagcgttggctaacatgatcgcacccgcaagcctcgccgga
accgggcttgcctcgccaacattggagaaggtgccagcaacaggacctcgtgccgatctt
gctgctctcaccccttccatcatcaagtcactcgccaagctgctcaaaggaaagcttatc
cccaccaaacaggcgtctatcaacctcctcgacgatatcatcactgtgcagagaggtggt
cttgggcagtatttcgaccaaatctttggtcctatcattgaggctatcaagccctccagc
gttgcctctacttcggcgtcgctcacttctgctggagggagtgcttccgccactgcaacc
acactgagaatcgctgctttgcgtctcaccagcgatattgtgaagaatcactcgtcggct
gtgcttcagccccatctccccagcctagtcacgggcctggtgtctgtggctcacgaccgc
ttttacaagatctccagtgaggctatccagacggccgaggaagtggtgaaagccattacc
ccccctcgctcccgactgaccgcgcaaaagttcaagggtgaacttcaaaagctgtacgac
gtcatcatcgaccggatcagagacaatgacgccgatgccgaggttcgtcaaaaggccatc
cacgccctcgggactcttttggctagaaccacagggaacgaaggctctggtttgctatcg
gaggacaagcgcaaggctgccttgggattcttgcttgagcgcttgagaaatgagaccacc
aggatagctgcggtccgagccatcgatactgtggccgcgtactcgcttggttctgttcag
cttgagccggaatggatccgtcaggtcgcccatgaacttgctgcccagctaagaaaagcg
aaccgggccctgcgtggctcgagcatcgtcgctctgaagcatctcatcctttccccctcg
accaagggcactcttgacccagattccgctcaggccatcgttaatgcgcttatccctgtc
attaccagcaacgatgctcagcttctggcccctggtcttctcatcctcgcgcacctgacc
caagagatgccccaggttgttatcaccccacagcttgtgaccgtcatctgcggcctggtc
aagacaacagtcccaggcacggtgctcgactccttgttgatcctggtgaccaacgctggt
caggctggccaaggcaagtccttgatgcaagggctgcttagggacgttggtgtcgctggt
gacccttctgtggtcggcaaggtcattggcacactgctcgtggccagcggggactcagcc
ggtgtccagctcgataactttgtgagcgaggtgaagaataacacccaggaccaagccagg
gtcagcttggctcttgctgtgatcggtgaggcaggattgagacttggtgcgagcttcccg
gtgccgccggaacttttcctgaaccagttcagcaacgagtatgacaaggtctcgttggct
gccgctgtcgcacttggacgagctggtgctgggaacgtctctgtgtatcttcccgtcatc
ctgcaggcgatgggcaagaagggcaacactcagtacctactgctccaatctatcaaggaa
atcctgcagcaagcggcgctgtcctcaacggatatcagccggtactccggcaccatttgg
gaccatattttggccttgacggatgccgaggacaataaggcagtctgcgccgaatgcgcg
ggtcgcatggtcatcattgaccccaagacgtatatgccgaagcttgaggctctactcaag
gacaagtcgcctgtgctgagggccactgccgtccaggctttgagatacacactgccagac
gataatgaggcctttgacgcggtccttagatcgtcgctctttgacatgctcaagactgtc
ctcgaagatcccgagttggagattcgccgtcatgccctgtctaccctcaactctgccgcc
cacaacaagcccgagctgatcatgggccgtttcaaccagttgattccttatgtcatgaag
gagacggtcatcaaccctgacctcatcagggaggtgaccctgggcccttacaagcacaag
atcgacgacggcttggaggtccgcaaggtagcatacgagacgttgtatgcgctcatggag
acggccttctcacggatttctatcattgatctctacgaccgcatcattgccggtctctct
gacgagcacgatatccgtgcgctctgcaacctcatagtgtccaagcttgtctatctcgac
tcggctgagacgatccgccgattggatcctattgccgcggcctttagggctacgctctcg
actaagctcaagaacacggcggtcaagcaggagattgagaagcaggccgaggccaaccgg
gcggtgctccgcgtgactttgctgcttggtgacaagctcaagtcggagctggcgacggcg
ggcggtgcggcgactggcgggcatgaggtgtggactagctattgggattgggtcaacaag
gacttcaatgagcagctcaaggctgtgagggaggagattaagagtttgtcttggaatact
attagtgcttcgtcttag
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integrated database retrieval system
