Podospora pseudocomata: QC762_206970
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Entry
QC762_206970 CDS
T09797
Symbol
FAL1
Name
(RefSeq) RNA helicase
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03013
Nucleocytoplasmic transport
ppsd03015
mRNA surveillance pathway
ppsd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
QC762_206970 (FAL1)
09122 Translation
03013 Nucleocytoplasmic transport
QC762_206970 (FAL1)
03015 mRNA surveillance pathway
QC762_206970 (FAL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsd03019
]
QC762_206970 (FAL1)
03041 Spliceosome [BR:
ppsd03041
]
QC762_206970 (FAL1)
03009 Ribosome biogenesis [BR:
ppsd03009
]
QC762_206970 (FAL1)
03012 Translation factors [BR:
ppsd03012
]
QC762_206970 (FAL1)
Enzymes [BR:
ppsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QC762_206970 (FAL1)
Messenger RNA biogenesis [BR:
ppsd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
QC762_206970 (FAL1)
mRNA cycle factors
Stress granule specific factors
QC762_206970 (FAL1)
Spliceosome [BR:
ppsd03041
]
Complex C
Other components
EJC/TREX
QC762_206970 (FAL1)
Ribosome biogenesis [BR:
ppsd03009
]
Eukaryotic type
90S particles
Helicases
QC762_206970 (FAL1)
Translation factors [BR:
ppsd03012
]
Eukaryotic type
Initiation factors
eIF-4
QC762_206970 (FAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
TniB
COG4_N
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
87907508
NCBI-ProteinID:
XP_062745722
LinkDB
All DBs
Position
2
Genome browser
AA seq
488 aa
AA seq
DB search
MKARTHGRTRASTRACSLSAGVWPGKSLGGSRCSCAAPQPKLSRRLNFQQRIPLELLFKL
ASTHLNHIRPSTIHSTPSLTVCANSKIKMAEGGIDRKADEKLTFSTSKEVTVHPTFESMS
LKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQVIDTAV
RETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTP
GRVADMIRRRHLRTRHIKMLVLDEADELLNQGFREQIYDVYRYLPPATQVVVVSATLPHD
VLTMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEKEDWKFDTLCDLYDTLTITQAVIFC
NTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQ
QVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTTEDVRILRDIELYYSTQIDEMP
MNVADLIA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcacggacgcacggacgcacgcgcgcgtccacgcgagcttgttcactttctgcc
ggagtttggccggggaaaagtttgggtgggtcgcgctgttcttgcgccgccccacagccc
aagttgtcgcgccgcctcaactttcagcagcgcattccactagaacttttgtttaagctt
gcttcaacccacctcaaccacatacgtccatcaaccatacacagcaccccatctctcacc
gtttgcgccaactcgaaaatcaagatggctgaaggtggtattgatcgcaaggccgatgag
aaactcacgttctcaacctcgaaggaggtcacggtccacccaactttcgagtccatgtca
ttgaaggagagtctccttcgtggtatctatgcctacggctacgagtcgccgtccgccgtc
cagtccagagctatcgttcagatttgcaaaggtcgcgataccattgcccaagcccaatcc
ggtactggtaaaacggcaactttctccattagtatgctccaagtcatcgataccgctgtg
cgcgagacccaggctcttgtcctttcaccaacccgcgaacttgcgacacagattcagagc
gttgtcatggcgttgggtgattatatgaacgtgcagtgccatgcctgcattggtggaaca
aacgtgggcgaggatattcgcaagctcgactacggccagcacatcgtatccggcacccct
ggccgtgttgccgacatgatcagacgtcgccacttgcgcacccgccatatcaagatgttg
gttctggatgaagccgacgaactgctcaaccagggtttccgagagcagatctacgatgtg
taccgctacctgccacccgccactcaggttgtggttgtgtccgctactcttccccacgat
gtccttaccatgacgaccaagttcatgaccgatccggttcgtattctcgtcaagcgtgac
gagttgacgctcgaaggcctcaagcaatacttcattgccgtcgaaaaggaggactggaag
tttgacaccctgtgcgatctctacgatacccttaccatcacccaagccgtaattttctgc
aacacaaggagaaaggtcgactggttgacagataagatgagagaggccaacttcactgtc
agcagtatgcacggtgacatgccacaaaaggagcgtgacagcattatgcaggatttcaga
cagggcaacagcagagtgttgatctcgaccgatgtgtgggctcgtggtatcgacgttcaa
caagtcagtctggtcatcaactacgaccttcccagcaatcgtgagaactacatccaccgc
atcggtcgttcgggcaggttcgggcgtaagggtgtcgctatcaacttcgtaacgacggag
gatgtgcgcatcctccgcgatatcgagttgtattactccactcagatcgacgaaatgccc
atgaacgtggccgacctcattgcttga
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integrated database retrieval system
