Podospora pseudocomata: QC762_209730 Help Entry QC762_209730      CDS       T09797                                  Symbol NAM7 Name (RefSeq) ATP-dependent RNA helicase   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism ppsd  Podospora pseudocomata Pathway ppsd03013   Nucleocytoplasmic transport ppsd03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:ppsd00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     QC762_209730 (NAM7)    03015 mRNA surveillance pathway     QC762_209730 (NAM7)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ppsd03019]     QC762_209730 (NAM7) Enzymes [BR:ppsd01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      QC762_209730 (NAM7)     5.6.2.5  RNA 5'-3' helicase      QC762_209730 (NAM7) Messenger RNA biogenesis [BR:ppsd03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      QC762_209730 (NAM7)    mRNA cycle factors     Common to processing body (P body) and stress granule      QC762_209730 (NAM7) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_30 AAA_19 ResIII DEAD NPHP3_N UvrD-helicase Helicase_RecD Viral_helicase1 PIF1 SLFN-g3_helicase AAA_22 nSTAND3 ATPase SRP54 AAA AAA_16 Ribosomal_S13_N AAA_5 Motif Other DBs NCBI-GeneID:  87907782 NCBI-ProteinID:  XP_062746049 LinkDB All DBs Position 2 Genome browser AA seq 1090 aa AA seqDB search MEDAFNHLGNHLVSDSAATINATADDFDDETESFLGDLKEHSSPTNALRRHDDNDNQGPE DFRDDDSNFSGPRNDVNSRGPEEEKELPAHACAYCGIHSPSCVVKCIAKECNKWFCSARG NSSSSHIVNHLVRARHKEVQLHPESALGDTTLECYNCGNKNVFMLGFIPAKSDTVVVLLC RQPCAAGSSAKDMSWDVSRWQPLIEDRSFLNWIVSPPTDAEQLRARHLTPPMIAKLEEMW KEAPSATVADLEKGTGVDDDPHPVLLKYDDPYHYQNVFGPLVKMESDYDKKLKEAQSEDH LVVRWDMGLNNKHLASFILPKIESGDVKLAVGDEMRIKYKGELRAPWEGVGYVIKIPNNQ SDEVTLELRKAANDKSVPTECTHNFSADYVWKATSYDRMQFAMKTFAVDELSVSGYIFHK LLGHEVAVAPMKTQMPKRFHVPGLPELNHSQITAIKTVLSTPLSLIQGPPGTGKTVTSAT IIYHLARMNNSQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVESSVSFLALHEQ VRLYKQSSELTNLNKLKAAAGELSSQDEKRFKQLTRQAEREILNSADVVCCTCVGAGDPR LSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSL FERLVKLNLVPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTITERLRKDVDFPWPVAET PMMFWSNLGNEEISASGTSYLNRTEASNVEKIVTRFFKAGVKPSDIGVITPYEGQRSYIV STMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALT RAKYGLVIIGNPKVLSKHELWHHLLVHFKDRKCLVEGPLTNLQTSLIQFSRPKMSFRPRH NAQAQHVSGGYTNGRGYGGGVNGSHRDFDTGSVLSYANGIPDDVSSIHSSALGGAGLTSA YPQMFSNFHPEQWPGLPGANPASRPGAKGRARIAESVAGESVANSEFTDASASVIGGKGV GQGGASLGAGLSEAISSARPTSYSRSDRLKQYVESGGRSLGLGSGYGRRFDDDEKSVSTA FASQIGTGFD NT seq 3273 nt NT seq  +upstreamnt  +downstreamnt atggaggacgccttcaaccacctcggaaaccaccttgtttccgactctgccgccaccatt aatgccaccgccgacgacttcgacgatgaaaccgagagcttcctgggcgatcttaaggaa cacagctccccgacaaacgccctccgtcgccatgatgacaatgacaaccagggccccgaa gactttcgcgatgatgacagcaacttcagtggcccaagaaacgatgtaaactcgagaggt ccagaagaggaaaaggagctgcccgctcacgcttgcgcgtattgcggcattcactccccg tcctgtgtggtcaagtgcattgcaaaggaatgcaacaagtggttctgcagtgctcgtggt aattcgagttcctcacatattgtcaaccaccttgtacgagcccgccacaaggaggttcag cttcatcccgagtcagcccttggcgataccaccctcgaatgctacaactgcggcaacaag aatgtctttatgctgggcttcattcccgccaaatccgataccgttgtcgttcttttgtgt cgccaaccttgcgctgctggcagttcggccaaggacatgagctgggatgtttcgcgatgg caacccctcatcgaggatcggtcctttctcaactggattgtctccccaccgaccgacgcc gaacagcttcgagctcgccatttgaccccgcccatgattgcgaaacttgaggagatgtgg aaagaggctccaagtgccactgtcgccgatctggagaaaggaaccggcgtagacgacgat ccgcatcccgtgctcctcaagtacgatgatccgtaccactatcagaatgtctttgggccc cttgtgaagatggagtcggactatgacaagaagctcaaggaagcgcagtctgaggaccac ctcgtggttcgctgggatatgggtctgaataacaagcacctggccagctttatcctgccc aagatcgaatccggcgatgtcaaattggccgtgggcgatgagatgcgcatcaagtacaag ggcgaacttcgtgccccatgggagggtgttggatatgttatcaagatccccaacaaccag tcggacgaagttacccttgagttaagaaaggcggcgaacgacaaatcggtccccaccgaa tgcacgcacaacttctcggccgactatgtctggaaggccacgtcctacgaccgtatgcaa ttcgctatgaagaccttcgctgtggatgagctcagtgtttctgggtacattttccataag ttgctgggccacgaggtagccgttgctcccatgaagacgcagatgccgaagaggttccac gttccagggttgcctgagctgaatcacagtcagatcactgccatcaagactgttctgtcc acccctctcagtttgatccaggggccgccaggtaccggaaagacggtcacctcagccacc atcatctaccatcttgccagaatgaacaatagtcaggttctcgtctgcgccccctccaac gttgctgtcgatcagctttgcgaacgtattcaccgcacgggtctcaaggtcgttcgcttg acagccaagtctcgtgaggatgtcgaatcgtccgtcagcttcttggccctccacgagcag gtccgcctttacaagcagagcagtgagctcacaaatctcaacaagctcaaggccgccgca ggtgaactgtcttctcaggacgagaagaggttcaagcaactgactcgccaggccgagagg gagattctcaacagcgctgatgtcgtgtgctgcacttgcgtcggtgccggcgacccgaga ctgtccaaaatgaagttccgaaacgtgctgatcgacgagtctactcagtcagctgagccc gagtgcatgattcctcttgtcctcggatgcaagcaggttgttcttgttggtgatcacaag cagctcggccccgtcatcatgaacaagaaggcggccaaggctggtcttaaccagtctctg ttcgagaggttggtcaagctcaacctggttcccattcggctcaacgttcagtatcgtatg cacccttgcctttcagaatttccttccaacatgttttacgaagggtcgctccagaacggt gtcaccataactgagcggcttcgcaaggatgtcgacttcccctggcctgttgctgaaact ccgatgatgttctggtccaacttgggcaatgaagaaatttcggcatccggaacatcttac ctgaaccgcaccgaagcttccaacgtggagaagattgttactcgcttcttcaaggctggt gtgaagccgtctgatatcggtgtcattactccgtacgaaggccagcgcagctacattgtc agcaccatgcagaatacgggcactttcaaaaaggagagctacaaggaggtcgaggttgct tcggtcgacgctttccaaggccgtgagaaggactttatcgttctttcttgcgtccgttcc aacgacaatcagggcattggtttcttgtccgaccctcgtcgtctcaacgtcgcgctcact cgagccaagtatggtcttgtcatcatcggcaaccccaaggttctgtccaagcatgagtta tggcatcatcttcttgttcactttaaggatcgcaagtgcttggtggaaggccctcttacc aaccttcagacttccctcatccagttcagccggcccaagatgagcttccgtccccgccac aacgcacaggcccagcatgtgtctggtggttataccaacggcagaggttatggcggcggt gtcaacggctcccaccgcgatttcgacactggctcggtgctttcgtatgctaacggtatt ccggatgatgtctcgtccattcacagctctgccttgggtggcgcgggccttacatcggct taccctcagatgttctccaacttccatccagagcagtggcccggcttgcccggggccaac ccggctagccgtcccggggccaagggtcgtgctcgcattgctgagagtgttgctggcgag agcgttgccaacagcgagtttacggatgcgagtgcgagtgttattggtggcaagggcgtc ggtcagggtggtgcgagcctgggagctggtcttagcgaggctatcagctcggctcgtcct acctcgtacagccgtagcgaccgtctcaagcagtacgtggagagcggcgggcgcagtctt ggcttggggagcggatatggccgtcgcttcgatgatgacgagaagagcgtcagcacagcg tttgctagtcaaattgggacagggttcgactga

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