Podospora pseudocomata: QC762_301180
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Entry
QC762_301180 CDS
T09797
Symbol
SFH1
Name
(RefSeq) Chromatin structure remodeling complex protein sfh1
KO
K11770
chromatin structure-remodeling complex subunit SFH1
Organism
ppsd
Podospora pseudocomata
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsd03021
]
QC762_301180 (SFH1)
03036 Chromosome and associated proteins [BR:
ppsd03036
]
QC762_301180 (SFH1)
Transcription machinery [BR:
ppsd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
RSC complex
QC762_301180 (SFH1)
Chromosome and associated proteins [BR:
ppsd03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
QC762_301180 (SFH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
GATA
Zn_ribbon_LapB
MccV
Motif
Other DBs
NCBI-GeneID:
87908333
NCBI-ProteinID:
XP_062744254
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All DBs
Position
3:317003..320278
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AA seq
610 aa
AA seq
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MALRSESQQAILSSLAPRLRTYQNALLQPVIPSAVPANPLSRTTKRGTTIINYAEDGYDD
YDDDDDDNRRRPTGLRSLRRDDSASKVDPSEKVGKEAVAPVEMQGIWRDWMNRTRRADAQ
NYAQACLPLTLIPIRIDLDIPSYTPPPALPVGGHADPNHPFFKPQEPTVPYRLRDTFMWN
LHETVITTDQFATTLVQDLDLPNRAQTISEISKQIRTQLEEYAGVALHPLFHSHSSRPNA
AEPLKASIHVESATPAPQNLATSSLSRANTPHVPVTPSKLGNAPATPGAISEGEGVTASA
TPLETSADNYESPDDTYRCIVSLNINLSSQVYTDKFEWSLLHPPGTAELFAKQTCSDLGL
SGEWVPAMTHAIYEAVLRLKKEACESGGLVAGWVGASSALTASGGVLPPGGVIEFPNDAV
NPSGAGAGWRYDPDGLAESWGPRLEYLSKEEIEKREGDRERQIRRLRRETARFSSNTGLG
AGGVPVGFGFTGLIEQDAEERMGRGERSKKKKRFRSLSPVGRAGTPGGYRGTPDATSGAG
GYGGGGTLAEHERNTWRCSHCKVWGTSVWAVRDGPYGPRSLCNNCGFMFERDRKLPRFTL
NLHLGDAKPL
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggctttgcggtccgagtcgcaacaggcgatactctcgtctttggcccctcgcttgcgc
acctaccagaatgctctgctccagcctgtgattcccagcgccgtgccggcgaaccctctg
tcgcgaaccaccaagcgaggaacgactataatcaactatgccgaggatgggtacgatgat
tacgacgatgatgacgacgacaaccgtcgccgacctaccggtttgcgcagcctccgtcgc
gacgacagcgcctccaaagtagaccccagcgaaaaggtcggcaaggaagctgtcgcccca
gttgagatgcagggcatctggcgcgactggatgaacaggacgcgccgggcagatgcccaa
aactatgcccaggcttgtctcccgctgacgctgatcccgattcgcatcgatctcgacatt
ccaagctatacacccccgcctgccctgcccgtcggtggccatgccgacccaaatcacccc
ttcttcaaaccccaagaaccaacagtgccttaccgtctacgcgacaccttcatgtggaat
ctgcacgagacagtcatcacaaccgaccagtttgccaccaccttggttcaggacctcgat
cttcccaaccgtgcccagaccatttcagaaatcagcaagcagattcggacacagcttgaa
gagtatgccggtgttgcgcttcatcctcttttccactcgcacagttcacgacccaacgcc
gccgagcccttaaaagcttcgatccatgtcgagtcggccactccggcccctcaaaacctt
gcaacctcttccctcagccgagccaataccccccacgttcccgtgacaccgtccaagttg
gggaatgccccagcgacgccgggcgcgatatctgaaggagaaggcgtgaccgccagcgct
accccgcttgaaacttcagctgataactacgagagccccgacgatacctatagatgcatc
gtcagccttaacatcaacttgtcgtcacaggtgtacaccgacaagtttgagtggtcgctg
ctgcacccgccgggaacggccgagctcttcgccaagcagacctgtagtgacttgggtttg
tctggcgaatgggtaccggccatgacgcatgccatctatgaagctgtcctacgtctcaag
aaggaagcttgcgagtcgggtggtttggttgctggctgggttggcgcctcgtctgctctc
actgccagcggtggtgttctgcctccaggaggagtgattgagttcccgaatgatgctgtc
aaccccagcggcgcaggtgctggctggcgctatgatcctgacggtcttgccgaatcctgg
ggccctcgtttggagtatctcagcaaggaggagattgagaaacgggaaggtgaccgggag
cgccagattcgtcggctgaggagagagaccgcgcgcttcagtagtaatactgggctgggc
gccggtggcgtgcccgttggcttcggcttcaccggacttattgagcaagatgcggaggag
aggatggggagaggtgaaaggagcaaaaagaagaagcgcttcaggagtctgtcgccggtc
ggccgagcgggcactcccggtggatataggggtactccagatgccacgagcggtgctgga
ggttacgggggtggcggaacacttgctgagcatgagaggaacacttggcggtgctcccac
tgcaaggtttgggggacaagtgtttgggctgtccgggatggtccttatgggccaaggtct
ctttgcaacaattgcgggttcatgtttgagcgcgatcgcaagctgcctcgttttacactg
aatctacatcttggtgatgccaagccactctag
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