Podospora pseudocomata: QC762_304700
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Entry
QC762_304700 CDS
T09797
Symbol
SCC2
Name
(RefSeq) Sister chromatid cohesion protein 2
KO
K06672
cohesin loading factor subunit SCC2
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd04111
Cell cycle - yeast
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
QC762_304700 (SCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppsd03036
]
QC762_304700 (SCC2)
Chromosome and associated proteins [BR:
ppsd03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
QC762_304700 (SCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
PDS5
HEAT
Cohesin_HEAT
Cnd1
Adaptin_N
INTS1_R4
MMS19_C
Motif
Other DBs
NCBI-GeneID:
87908673
NCBI-ProteinID:
XP_062744674
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All DBs
Position
3:1683165..1689498
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AA seq
1964 aa
AA seq
DB search
MANSWSGAHNGPPNNNNWDGAPQANPPPPPVSQPAGFARPFTLAEVLPYTPFSAIAPFDS
SVLPSPSIGSASPAPPVTDLIPSLDFESLNQEASTNTASRLLQQTVGQVQRLLERGNIPE
YKFKTGPRATTSPSPAKHSSLAAGLSPFSKMVHDSTSIPFRYPTPDTPTPAANNHPNVIT
TPVPTKQKISAKPVIKKEPGQGKKLSSIPANTPGPSASPATSANQQAHAANKARFEIVLP
TKKELEQQAGLANIKPHPSSNVTPRAPPAPVAPPTPAYHPQYQPQVQHSPQVQRQAQVQH
QPQVHQQHQVPQQHQVQQQRSQQHPPQPALPPLSSAVATAASRTATPPERPGSQSISSSQ
KPVIAIELPKTKTFDKNEFTVVADEPEEPANLPLKKRKHGDIDGDDIYGESLDLRQRADA
ALHDLRVFLHNAFQAENAVLARRQGNDMVVLVSENEATLTATAQSKAQALLGKTITLNCF
KTAPLEELLHLIRLSEGALKLAETLDIKVDETWVAADVEQWLSQLPWLEMAIRAGRTSLR
IMCGGRQEKQLYSQDTIEHCLDLFKRIIDGIVIPIAELRATPGANELFKTLAQNKKKIVA
LFNDCQKLFSIMATLISSIDTSDAVTNTLEFTASRLIFMETAHAEKDSVIDTQKFDGLRL
VAMDMLSQIFLLNPEQRKGIFNEILSSLEKLPLGKRARTFKLVDGTSIQPVSALIMRLVQ
TSAGKVGDAGRGKGNTMPVEDEAAEGPRRLPQSFSIQDEEHGASQHRIAIQELDDVSEAL
IKTATNSASDVVQFIVSRALKSTKSGDTPYRNLLDMFVEDFALCLDNPDWPAAELLLRIF
MHLMFQLIENDKQPVTAKNMALELLGSMGAAVSKLRGHVRKGVSSLDTQDSDGLGLFLSD
LAAAALELKSRPEQMVAWTGPYRATLEHLESRFSEDPHLASAISFLVSDWASKTCKTYDD
YEDDVAERDHELGRLAYRLREMIHDRQWLSREYSFKDISQSYARLSYSITLLRSPLCEAF
NTILNILLNSMASDQPTVRSKSLKSVNQVLETDPSILDGDSVVVQLILRCSNDSSTQVRD
SALGLIGKCISMRPALEEQITPTVVERFNDAGHGVRKRAMKLAKDIYLRNSNRTLRSTIA
NGLLHRIQDPEESVRELAKQVIEEIWFAPFHSGQTSAASKISLADHVSLMVQTVNRGNVV
SVLDKVLQALLAPSNKTAQASLEVCTKLVESMFDLVDSSDPEDTTKPSGRDVLQILMIFA
KAEASLFTFEQLRLLRPYISSIRSNEDPAVSKAVVVIYRRVLPQLSSAHSQFLTEVRSEL
MPTMTTVSRPLMNEVMACLWIISGLLDTSEHMARLAASSLRNIQALHAKSKTQPLDTRTM
RQFERYSLIVGMAGKHFNLDSHLDFFNKMLKTNGSSVSKLMVDLVVPFAAPSYHMDMRKA
ALDSVGLVCQAWPRNYVSANVYTTFQHVFDEQVPVLEAMVLRSFKEFLLTEEKRSEEAAE
APTGMNGGAKQEKKRELTVIGGTNYDDVASATTHRFLKEIIRIATATQDNHAFLAVEVLA
SINRQGLVHPKETGVTFITLETSSNPRISELAFLEHKALHAKHETVVEREYVKAVQSAFA
YQRDIVKDSRGAIATGNGVFTPKLHLLMEVLKISKSKNRQKFLEKLCGQLDFDVGKLDMG
ERVPSHVVYARFVTECLAYFEYLTVGEVGCVVGALERLVTGTGAGVAQAIEMEVLGFRVD
VLEEEEQQQQQVLGENRQAAGAAAGSLSSSSVNQLQEAPRVELEKLRRLTAGAVVLLGVW
EARTYLRRLYGLGIGGRRENKVKMLGKDLSKAPVKAQGVTGEKLWEEMGVLGERLGSREG
MMGVCRGFVELMNVDKEFLVGDEDEEGLMEEGGASPMSGGEDDELVGERKRGRKRKSDAG
SQGTPGKKKRGRSGSMGGQPRKRGRPKKVAREEEEGEGEEGDWF
NT seq
5895 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactcatggtcgggcgcccacaatggccctccaaacaataacaattgggatgga
gctcctcaggccaacccaccaccacctccagtttcgcaacctgctggctttgcgaggcca
ttcacactcgccgaagtcttgccctacacacccttctcggcgatagctccctttgactcg
agtgtgcttccttcgccatcgataggttctgcgtcgcccgctcccccagtaaccgacctg
ataccaagtctcgacttcgaatcgttaaatcaagaggcttccacgaatacggcctcgagg
ttactacagcagacagtcggccaggttcaaaggcttctagagagaggaaatatccccgaa
tacaaattcaagactggaccacgcgcgacgacttctccttcaccagcgaaacacagttct
ctggctgcgggactgtcaccgttctcgaaaatggtgcacgattcaacgtcgataccgttt
cggtatccgaccccagatacccccacacccgctgcgaataatcatccgaacgtcattacc
acgcccgttcccacgaaacagaagatttctgctaagccggtcattaagaaagaaccaggc
caaggaaagaaactgagcagtattcctgcaaacacaccgggcccttctgcgagcccggcc
acatcagcgaaccagcaggcgcatgctgcgaacaaggcgcgattcgagattgtcttgccc
accaagaaggagcttgaacagcaggccggccttgcgaatatcaagccgcacccttcgtct
aatgtgactccacgcgctccgcctgcgccagttgctcccccgactccagcgtatcatcct
cagtatcagcctcaggttcaacactcacctcaggtacaacgccaagctcaggtacagcat
caaccgcaagtacaccaacagcatcaggtcccgcaacaacatcaggttcaacaacaacgc
agccagcaacacccgccgcagcctgctctcccacccctcagctctgcagtagctaccgcg
gcctcaagaactgccacgcccccagagcggcccggatcgcaaagcatatccagctctcaa
aagccagtcattgctattgagcttcccaagaccaagacttttgacaagaatgagtttacg
gtggttgcagatgagcctgaggagcctgccaacttgccattgaagaagcggaagcacggt
gatattgatggtgacgacatctatggagagagcttggatcttcgccagagagctgatgcg
gctcttcatgacttgagagtgtttcttcacaacgctttccaggcagagaacgctgtgctt
gcccgaaggcaaggaaacgacatggtggttttggtttctgagaacgaagctaccctgaca
gcaaccgcacaatccaaggcgcaggccctgctgggcaagacgatcaccttgaactgtttc
aagactgcgcctctcgaggagctacttcacctcattcggctttccgaaggtgctttaaag
ctggccgaaacgctagacatcaaggttgacgagacctgggtagctgccgatgtggagcaa
tggctgagccagctgccctggttagagatggcgattcgggctggccgcacgtctctgaga
atcatgtgtggcggccgtcaagaaaagcagctttactcccaagacacaatagaacactgt
cttgacctgttcaagcgtatcattgacggcatcgttattccgattgccgagttgagagcc
accccaggggctaacgaactcttcaagacgttggctcagaacaagaagaagattgtggcc
ttgttcaacgattgccagaagctgttttctatcatggcgactttgatctcgtccatcgac
acctcggacgcggtgacaaacacgctcgagttcactgcctcgcggctcatctttatggag
acggcacatgcagaaaaggactccgtcattgacacacaaaagttcgatggacttcgtttg
gtcgctatggatatgctttcgcagattttcctgctgaaccctgagcagcggaagggcatt
ttcaatgagattttgagctcgttggagaagctgccgcttgggaagagagcgaggactttc
aaacttgtggatggcacgagtatccagccagtgtctgctctcatcatgcggttggttcag
accagtgctggcaaggttggcgatgcgggtcgaggaaaggggaatactatgcctgtcgag
gacgaggcggccgaaggccccaggcggctgccgcagtcgttttccattcaggatgaggag
cacggtgcctcgcagcatcgtatcgccattcaagagcttgacgacgtttctgaggccttg
atcaagacagccaccaacagcgcctcagacgttgtccagtttattgtgagccgagcgctc
aagtcgaccaagtccggtgatacgccgtatcgcaacctccttgacatgtttgtggaggac
tttgctctctgtcttgacaatcccgactggcctgcggcggagctgttgcttcgaatcttt
atgcatctgatgtttcagctcatcgagaatgacaagcaacccgtcactgcgaagaacatg
gctctggagctgttgggaagcatgggtgccgctgtttccaagctccgcgggcatgtgagg
aaaggtgtcagcagtctcgacacgcaagacagcgacggcctggggttgttcctttccgac
ttggctgctgcggcgctggagctcaagtctcgcccggagcagatggtggcgtggactggg
ccatatcgtgctacgcttgagcacctcgagagccgcttctcagaggatcctcatctggcg
agtgccatctctttcttggtttccgactgggcaagcaagacatgcaagacctacgacgac
tatgaagacgatgttgccgagcgtgatcatgagcttggccgactcgcctacaggctccgg
gaaatgatacacgatcgtcagtggctgtcgagggagtattcttttaaagacatcagccag
agctatgcgaggctgtcttactcgatcaccctcttgaggtcccccctctgtgaggccttc
aatacgattctgaacattcttctcaactcaatggctagtgaccagccgacggtacgaagc
aagagtttgaagagcgtcaaccaggtcctggaaacggacccgtccattctggatggagat
tccgtggtggtgcagctcattctgagatgttccaacgactcgtcgacgcaggtgcgtgat
tcggcgcttgggttgattggcaagtgcatcagcatgcggccggcgttggaggagcagatt
acccccacggttgtggagcggtttaatgatgctgggcatggtgttcggaagagggccatg
aagcttgccaaggatatttaccttcgcaacagcaaccggacgctgaggagcacgattgcg
aatgggctgctgcatcggattcaggacccggaggagagcgtcagggagctggccaagcag
gtgattgaggagatatggtttgccccttttcacagcggccagacctcggccgcgtccaag
atttctcttgcggatcatgtttcgctcatggtgcagacggtgaaccggggcaatgttgtc
agtgtgctggataaggtgcttcaagcactgctggcgccgagcaacaagacggcgcaggct
tcgttggaggtctgcacgaaactggtggagagcatgtttgacctggttgacagctcggat
ccggaggacacgaccaagccttcgggaagagatgtcttgcagattctgatgatttttgca
aaggcggaagctagtctctttacgtttgagcagttgcggctgttgaggccttatatcagc
agcatccgcagcaacgaggacccggccgtgtccaaggctgtggtggttatctatcgtcgg
gtgcttccgcagctgtcgagcgcgcattctcagttccttaccgaggtgcgcagtgagctg
atgcctaccatgacgacagtttcacggcctctgatgaacgaggtcatggcttgcttgtgg
atcattagcgggctgctcgacacttcggaacacatggccaggcttgcggcctcgagtttg
aggaatatccaggcgctgcatgcaaagagcaagacgcagcctctggatacccgcaccatg
cgccagtttgagcggtactcgctcattgtcggtatggcgggcaaacacttcaacctcgac
agccatttggactttttcaacaagatgttgaagacgaatggcagctccgtctcaaagttg
atggttgatctggtggtcccttttgctgccccgtcgtatcatatggacatgaggaaggca
gcgttggactcggtggggctggtgtgtcaggcctggccgaggaactacgtttctgcaaat
gtttacacgacgtttcagcacgtgtttgacgagcaggttccggtgctggaggcgatggtg
ctgaggtcgtttaaggagtttttgctgacggaggagaagaggtcggaggaggcggcggag
gcgccgacggggatgaatgggggggcgaaacaggagaagaagagggagttgactgttatt
ggtggcacgaactacgacgatgttgcgagtgctacgacgcatcgattcctcaaggagatt
attcggattgctaccgcgacgcaagacaaccatgctttccttgcggtggaggttctcgcc
agcatcaacaggcagggtttggtacaccccaaggagacgggcgtcacgttcattacgctt
gaaacgtcgtccaatcctaggatttcggagcttgcttttttggaacataaagcgctgcac
gccaagcatgagacggttgtggaaagggagtatgtcaaggctgttcagtcggcttttgcg
taccagcgggacattgtcaaggattcgcgcggtgcgattgccaccggcaacggggtcttt
actcccaagcttcatctcctgatggaggtgctcaagatcagcaagtcaaagaatcggcaa
aagtttctggagaagctgtgcgggcagctcgactttgatgtgggcaagctggacatgggg
gagcgggtgccaagccatgtggtgtatgcgaggtttgtgacggagtgtctggcgtacttt
gagtacttgaccgtgggcgaggtggggtgtgtggttggggcgctggagaggttggtcacc
gggacgggggcgggcgttgcgcaagcgattgagatggaggttttggggtttagggtggat
gttcttgaggaggaggagcagcagcaacagcaggtcttgggagagaatagacaggctgct
ggtgctgctgctgggtcgttgtcgtcgtcgtcggtgaatcagttgcaggaggcccctagg
gtggagcttgagaagctgaggcgtcttacggcgggggcggtggttttgttgggtgtttgg
gaggcgaggacttacctcaggaggttgtatgggcttgggattggggggaggagggagaat
aaagtcaagatgttggggaaggacttgagtaaggcccctgtcaaggcgcagggggtgacg
ggggagaagttgtgggaggagatgggggtgttgggggagaggttggggagtagggagggg
atgatgggggtttgtagggggtttgtggagttgatgaatgttgataaggagtttttggtt
ggagacgaggatgaggaggggttgatggaagaggggggggcaagtccgatgagtggcggg
gaggatgatgagctggtgggagagaggaagagggggaggaagaggaagagtgatgcgggt
agtcaggggacgccggggaagaagaagaggggtaggagtgggagtatgggggggcaacct
aggaagaggggacggccgaagaaggttgctagggaggaggaggaaggggagggtgaggag
ggggattggttttag
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