Podospora pseudocomata: QC762_305040
Help
Entry
QC762_305040 CDS
T09797
Name
(RefSeq) hypothetical protein
KO
K11595
chromo domain-containing protein 1
Organism
ppsd
Podospora pseudocomata
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppsd03036
]
QC762_305040
Chromosome and associated proteins [BR:
ppsd03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
QC762_305040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chromo
Motif
Other DBs
NCBI-GeneID:
87908706
NCBI-ProteinID:
XP_062744710
LinkDB
All DBs
Position
3:complement(1771785..1777421)
Genome browser
AA seq
1846 aa
AA seq
DB search
MFKNILVESWPSRLDDDPAESDDDAISLTSTIPPPDDEEYVVESILAERPNQNGIMYYLV
QWDATRFDPFWDSTWEPAEIFGDDMIAQWAETKAKQEAGEEKPFDVDRYFAVQQQKEREK
RERHNLRNAKRARLGLPLTEPLPASSSKSSAIPEDDSSSDEASEDGDVVEVSAPRPKPPK
ARKPSSTSIYKKGVARPIKTTAPKSPTKSKPLKSSTLSKPNKDRPASLPGKLAKPAATSD
PLASSSTKKRQATAPSTTGYEGTARKASKDDVSGPSKSKTKESNLGSKGAASSIRAPSGQ
KTTARKSTQKTVQSKTGNIFTGGKVRKPRPVIEEVMSNPAKDPKPFSNMHLGRLAELRSR
AREDIAPDPSKVALFPLTEGPAAARKMSKETAQPTDLPEDDSLFVGDYSMELESNPEDIT
APISSSWTGLAPISTGLVPATSAGLTATSGGISPKTIDPAPASAGLPPPSACLPSSPQAH
TAPISRPPLKKRKSVRWDDDVNSVIEFREPDPMDLDDNTLVQKDQVEATPRPAASLAARP
PTPPPPLSAPEPTVTIIPQRNTCSEKRVRFGKPQPGSKCIQTTFNGLPNGTRDELYARFL
ATESLEFDHSCLATSVATALHSMVKTGLAFGGLSSNTDQQRLHNVASSLRAGIMGLLCAQ
PDYSILIYPSKCEEWNAVQLRGLPASGPSEFELLYYIFTPREPLLALLPPPRDVPPKPPG
AGKESSNRQLIMEKFFGFDYQRLLPTSLKPASTHNFFLAFPDSKMEVRLLLFHWLRACEP
NCCIFTSDHPGSWYAFQSKLSSEETAGVVIVHELMAWTLHRLPNLRHLLLGRDDQFWCFT
EPMSKLPMYPSTTSLLEESSVVPPGQLQLTRLFPLGAAILLTPSFLVAEPTRALEIIDWF
LMYFAKSTTCRLVTAWDFAAYLRDLAEEKEHDRAKLLASPAAMESTANLTILENLKGLSK
EDCESRFTAAIKAYELDDLRRRKLPPVGDNEESATLVYAIDKIDPNDEQSLVNWFGYWST
LRLDQFRHFYVLGTDDSITARRSERGEREIAVPTYTSRTINDSDYVLKGTLEHYRVRNTQ
AEQSGQAHAVAESAGIAPAATSSAAPASVYQAFAMHEVSSECFSRISQHSLAEMLKDVGP
SEWNSSLWILFGFPVSWSDSDMGDHYEDFTLHWNTISSWFKWGFPWGGRHGITRFNTYVG
FFYTIPDEWDPDNKPDDRTPKRHPWLVFYRPRDAFKRPWTDAELIIWDPAAPRRFGDRQP
TEGELTFMQRQLIKHVREHTGERNPGTRLTDVWLGGYMVPEECQSPHDIDVVALFLQALG
TEFQFKKLIPAPRTSMLRPNKGFKRVKLATDPVTDEDDVEMGIRDSETSDEEDARIIFHP
PRATGRPLSDDGPPSKCTNRLFEEARLWRNRYGRRSQYMKYRFRPTTEWYKDQEEEGRGF
SHITDLGPPTPRWPAWTEAGGGVGGSAAKGDGSAQPQPSTYGQSPITVSRTAASSSYHQS
SVPPPMLQEPPTVTLTTLTEASTTPALTPLGMPVPMRLINRLSTPLKSILKNSGTPQPTA
AMGEVQLLDYNAENTPSSAAFSRMRISSPPPASRALKKTVPSEEPAPKSKAITVGSVAGR
SKRPRIPDSASGDSIVVSGEDDTPSTIPAPEFHRLKKRRTSETASMAIRGEETVSSASKP
STSTMIKVLPVLTKTAADSRPKAQSKASALPFRSSTSKPPKTSATPIPVPKVPGVRPAMT
TPTSQPRTPISQHNTPGTRPPTATPTAGSVPRLFNTAVPPHRKVGGTVTNQAGEESTTIP
PLRPSDTKRRKTLKPPSSTSTSGSAPAPKTTTKTGKRAGTNKARPS
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagaatatcctcgtggagagttggccatcgaggctggacgacgacccggctgag
agcgacgatgatgccatctcattgacatccacaatccctccccccgacgacgaggagtat
gtcgtcgaatcgattctggctgaacgcccaaaccaaaacggaatcatgtactatctcgtt
cagtgggatgctacccggtttgatccgttctgggacagcacttgggagcccgcagagatt
tttggtgatgatatgattgcccagtgggctgagaccaaggccaagcaagaagctggcgaa
gagaagccttttgatgtcgacaggtactttgcagttcaacaacaaaaggagcgggagaaa
agagaaaggcacaatcttcgtaatgcgaagcgcgcccggctgggccttcccttgaccgag
cctttgccagcatcatcgtccaaatcaagtgctattccagaagatgattcgagtagtgat
gaggcgagtgaggatggcgatgttgtggaagtgtcggcccctcggcccaagccacccaag
gcacgaaaaccatcttcgacctcgatttataagaagggcgtggcaaggcctattaagacc
actgctcccaaatcgccaacaaagtccaagcctctgaagtcctcgaccttgtcaaaacca
aacaaggataggccagcaagcctcccaggcaaactagccaaacctgcagcgacctccgac
ccactggcatcatcttccacaaagaaacggcaggctacagctccgtcgaccactggatac
gagggaactgcaagaaaagcaagtaaagacgacgtgagcggcccgtcaaaatcaaagacc
aaggaatcaaacctcggttccaagggtgccgcatctagtataagagcgccgtcgggccaa
aagacaacggcccgcaagtcgacccaaaagaccgtccaaagcaagacggggaacatcttt
actggcggtaaagtaaggaaaccacggcctgtcattgaggaggttatgtccaatcccgca
aaggaccccaagcccttcagcaacatgcatcttgggagattggccgaacttcgtagccgt
gctagggaagacattgcccctgacccttcaaaggtggcgctcttccccctgaccgagggg
cctgctgcagcgagaaagatgtccaaggaaactgcacaaccgacggatctaccggaagac
gacagcctttttgttggcgactattcgatggagctggagtcaaacccagaagacataaca
gcacccatttcctccagttggaccggccttgcaccgatctcgacaggcctagtgccggca
acctcagcaggcctcacagcaacgtcgggaggaatctcaccaaaaacaattgacccagca
ccagcctcagcgggcctgccaccgccttcagcatgcctgccgtcatcaccacaagcacac
acggcaccaatctcaaggccccctttgaaaaagcggaagtcggtgagatgggatgacgac
gtgaacagcgtcatcgaattccgtgagccggatcccatggacttggacgataatactctt
gtgcaaaaagatcaagttgaggccactccacggcctgcagcatctctcgctgctcggcct
cctaccccaccccccccattgtctgctcctgagccaacagttaccatcataccccaacgc
aatacctgttcagaaaagcgggttaggtttggcaagccccagcctgggtccaaatgtatt
caaacaactttcaacgggttacctaatgggactcgtgatgagctgtatgcaaggtttcta
gccacggagagcttggagtttgaccacagttgccttgctacgtcggtagctaccgcactg
cactcaatggttaaaactggcttggcctttggcggcttaagttctaatactgaccaacaa
aggctacacaatgtggcgagttctttacgagccggcattatgggactgctttgtgctcag
ccagactacagcattctcatatacccgtcaaagtgtgaagaatggaatgccgttcagctc
aggggacttccagcgtcaggtccatctgaatttgagctcttgtactacatatttacacca
cgcgagcccctcctggccctgctgccgccaccccgggatgtgccacccaagccgcctggc
gctggcaaggagtcatcaaaccggcaactgatcatggaaaagttcttcggttttgactac
cagaggctgctaccaaccagcttgaagcccgcatcgacacataacttcttcctggcattt
cctgactcaaagatggaagttcgtctcttgctatttcactggctccgtgcatgtgagccc
aactgctgtattttcacaagtgaccatcctgggagctggtatgccttccagagcaagctc
agctcagaagagacagcgggtgtggtaatcgtacatgagttgatggcgtggaccttgcac
aggctcccgaatctgcgacatctcttacttggccgagatgatcagttttggtgctttaca
gagccgatgagcaagctcccgatgtatccatcaacaacttcgctgttggaagaaagttct
gtggtgcctcccggccaactccagctcacgcgcttgtttcccctaggggcggccatatta
ttgaccccaagctttctggtagcggaaccaactcgagccctcgaaatcatcgactggttt
ctgatgtactttgccaaatccacaacatgtcgtcttgttaccgcatgggactttgcagcc
tacctcagggacttggctgaggagaaggagcatgatcgagccaagttgctagcctcccca
gcagcgatggagagcacggccaatcttaccattctcgaaaacttgaaaggtttaagcaag
gaagattgcgagagccggtttactgccgctataaaggcctatgagctggacgacctgaga
cgtcgaaaactcccgcctgttggtgacaacgaggagagcgccacgctggtctatgctatt
gacaagatcgaccccaatgacgagcaaagcctcgtcaactggtttgggtactggtcaaca
ctgcgattggatcagttccgccacttctacgttcttggtacagacgactccataacagcg
cgtcggtctgaaagaggcgagcgagaaatcgccgttccaacgtacaccagccgcaccatc
aatgactcagactacgtgttgaagggcaccttggagcactaccgtgttcgcaacacgcag
gccgagcaatccggacaagcccacgctgttgctgagagcgcaggtatagcaccagccgcc
acctcttctgcagcccctgcttctgtgtatcaggccttcgcaatgcacgaggtctccagc
gagtgctttagtcgcatatcacagcactcacttgctgagatgctgaaagatgtggggcca
agcgaatggaattccagtctctggatcttgttcgggtttccagtttcgtggtccgatagc
gacatgggcgatcattacgaagatttcacactgcactggaacaccatctcgagctggttc
aaatgggggtttccatggggaggaaggcatgggatcacgcggttcaatacctatgtcggt
ttcttctataccatccccgacgagtgggaccccgacaacaagcctgacgaccgcacgcca
aaacgacacccctggctcgtcttttatcggccacgtgatgcgtttaagagaccgtggaca
gacgccgagcttatcatctgggatcctgcggccccaaggaggtttggagaccgtcagccc
accgagggcgagcttacgttcatgcagcggcaactgatcaagcatgtacgggagcataca
ggggaaaggaatcccggcaccaggttgaccgatgtgtggcttgggggttacatggtcccg
gaagaatgccaatctccgcacgacattgatgtggtggctctatttctccaagccttgggc
accgagttccagtttaagaaacttattcccgcgccgcgtaccagcatgttgagacccaat
aaaggattcaaaagggtgaagctcgccacggatccagttactgacgaggacgatgtggag
atgggtatccgggattctgagacatcggatgaggaagacgcccgcatcattttccaccca
cctcgcgcgacagggcggcccttgtcggacgacgggcccccatccaagtgtaccaacagg
ctctttgaagaagcccgcctctggcgcaacaggtatgggcgacgctcacagtacatgaag
tatcggtttcgacctaccacggagtggtacaaggaccaggaggaggaggggcgtggcttt
tcacatataacggacttgggaccgccaaccccacgttggccggcgtggactgaggccggt
ggaggcgtcgggggaagtgcagccaaaggtgatgggagtgctcaaccgcagccatctaca
tatggacagtcacccattacagtctcgcggactgccgctagctcttcctaccatcaaagc
agcgtgccccctccgatgttgcaggagccaccaactgtgactttgacgacactcactgag
gcttcaacgacacctgccttaaccccgttgggtatgccggtaccgatgagattgatcaac
agactcagcaccccgttgaagtcaatactgaaaaactcgggaaccccacagccgaccgct
gctatgggcgaggtccagcttcttgattacaatgctgaaaatacaccttccagcgctgca
ttttctagaatgcgcatctcctcaccaccgccagcatctcgggcattgaaaaagacagtc
ccttctgaggagcctgctcctaaatcgaaggcgataacggtgggttcggttgccggtcgt
agtaagcggcctcgaataccagattcggcttcaggggattcgatcgtcgtaagcggggag
gacgatacaccgagtaccattccagcgcccgagttccacagactgaagaagcggcggacg
tctgagactgctagcatggcaatcaggggggaagagacggtctcctcggctagcaagcct
tcaacttcaacgatgatcaaggtgttgccagttttgaccaagacagcagcggattcacgg
cctaaagcacagagcaaagcgtctgcattgccgttcagatcttcaacctcgaagcctcca
aaaacatcagcaacgcctattccggtgccaaaagtcccgggcgtaaggcccgcaatgacg
actcccacatcacagcccaggacgcccatctcgcagcacaacacccccggcacgaggccc
ccaacggcaactcccaccgcgggttccgtccctaggctcttcaatacagcagttccccca
caccgaaaggtcggcggcacagttacaaaccaagctggcgaagagagcaccacgatccct
cctcttcggcccagcgacaccaaacggcgcaagacactgaagcctccgtcttcaacatcg
accagcggcagcgcccctgctcccaagaccaccacgaagaccgggaagcgtgccggaacc
aacaaggcgaggccttcttag
DBGET
integrated database retrieval system
