Podospora pseudocomata: QC762_307220
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Entry
QC762_307220 CDS
T09797
Symbol
ELP1
Name
(RefSeq) putative elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
ppsd
Podospora pseudocomata
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppsd03016
]
QC762_307220 (ELP1)
Transfer RNA biogenesis [BR:
ppsd03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
QC762_307220 (ELP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
HB_ELP1
Beta-prop_WDR19_1st
TPR_GEMI5
Beta-prop_IFT140_1st
NPH3
WD40_CDC20-Fz
Clathrin
Beta-prop_EML_2
DUF5395
MEDS
Motif
Other DBs
NCBI-GeneID:
87908920
NCBI-ProteinID:
XP_062744953
LinkDB
All DBs
Position
3:2540286..2545115
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AA seq
1332 aa
AA seq
DB search
MRNLRNIGHSVFRDPVPDSPFPTAASASAPFSASCWDASRDEVIVARGPTAHDARIELSR
VVKHTHERPPCHLKSRNIATWDALCPNEDGSPDVIRSIHYFSDTLTTCVIMAGGDIVTVT
EDEETAPGEAHIEIVGTLSPSISAARWSPDEELLAIATGDAKVLFMSRSFDVISEVGLSE
EDLKLSKHVSVGWGKKETQFIGKGAKAKGLRDPTIPEKVDEGALSSNDDGRCTISWRGDG
AYVAVNFLQQGQRRVIRVYNREGELDSVSEPVDGLEGALSWRPEGNLMAGIQRLSDRIDV
VFFERNGLRHGQFTLRAPQDAPDVAAELALEWNSDSTVLAVIMKDRVQLWTTSNYHWYLK
QEFLCGDGGSKHHQSPKFAWHAEKPLLCVAATASKVLVNEYIFTIARGPGVSPHDFGAVA
VIDGQTLKFTPFRTANVPPPMAFDELEVESPIIDVTIGRDCNSMAVLHRGGVSFFELIIQ
GPRVLPPKLASTASFRKTHAQLYEEHVLQVGLSGSNEVHVLQMSEDMEIVRHTFEGTQTN
EHGWQKTDATSITTITTPIVPPVVEEDGVIAQDWRGRLSRIIEGEHLPLPAEFANFLPWT
SYITHSGEFLAFGQARNGYLYCNSTLLARNCTSFVVTKHHLIFTTTNHFVKFVHLATEEE
LEVPQDDPENDERCRSIERGGRLVVAMPSKMSIVLQMPRGNLETIYPRAMVLSGIRDLIE
AKNYGAAFATCRTQRVDMNLLYDHRPEQFLEHVGLFLEQVKDTANIDLFLSTLKEEDVTR
TMYKDTKAGSAPQSQEAETAAKESKINKICDAVLAKLKTQKNANLQNIITAHVCKNPPAL
DDGLRVVADLMQEHEALAERAVEHICFLVDVNRLYDHALGLYNLELTLLVAQQSQRDPRE
YLPFIQELHKMPELQRKYTIDDKLGNHEKALDHLKALGDFEEVKTYTVKHKLYQHALSIY
RHDEQHHRVITDLFAAHLKSISQFKEAGLAYESLNSYHDATDCYLKAGAACWRECLYVAQ
QQDPPITAQRLEEVASDLADALREAKDYAAAATIHMEYLSSIESAIQSLCKGYLFADALR
LVALHKRRDLLESHIDSGLADALSSSIEFLADCKAQLKAQVPRILELRKKAKEDPLAFYE
GENPFGSKNADGYDIPDDISIAASSRATTSASMFTRYTGKAGSVGTVGSNVSRATSKNRR
REEKKRARGRKGTVYEEEYLVNSVRRLVERVEGTKGEVERLVFGLVRRDMQERARVIEEA
MGVVLEGCRQAVGEVWPQEEKQQVEGEGEDGEGWRPVGGDGVLFESLEAMRAKQTAPVVT
GFEKLALLGGKK
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgcggaacttgcgcaacatcggccacagcgtcttcagggatcccgtcccggattctccc
tttcctaccgccgcctcggcttcggcccccttctcggcatcgtgttgggatgcctccagg
gatgaggtgattgttgcccggggcccaaccgcccatgatgcccggatcgaactctcgagg
gtggtgaagcacactcatgagcgtcccccttgtcacttaaaatcaagaaacatcgcaaca
tgggatgcactttgcccaaacgaagatggcagtccagatgttatccggagtatacactac
ttcagcgacacattgacaacatgtgtcatcatggccggcggtgacattgtcactgttact
gaagacgaagaaaccgcccctggtgaagcgcacattgagatcgtaggcacattgtcgccc
tctatctcggctgctcgctggtcaccagatgaagagctacttgccatcgcaacaggggat
gccaaggtgctcttcatgagccggagcttcgatgttatttcagaggttggcctcagcgaa
gaggacttgaagctgtcaaagcatgtctctgtcggatggggcaagaaggagactcagttt
atcggcaagggcgccaaggccaaggggcttcgagaccctactattccggagaaggtagac
gagggcgccttgagctcaaacgatgatgggcggtgcacgatcagttggagaggtgatggc
gcgtatgttgctgtcaacttccttcagcaaggacaacgacgtgtgatccgggtgtacaac
cgtgaaggtgagttggacagtgtcagtgaacccgtggatgggcttgagggcgctctgagt
tggcggcctgagggaaatctcatggccgggattcagcgtctctcggaccgtattgacgtt
gtgttctttgaaagaaatggcctgcgccatgggcagttcacacttcgagccccccaggac
gcccctgatgtggctgcagagctggcgcttgagtggaactcggactcaaccgttctagct
gttatcatgaaggatagagtacagctatggactacaagcaactaccactggtatctgaaa
caagagttcctctgtggcgacggtggtagcaagcaccaccagagtccaaagtttgcctgg
catgcagagaaaccactgttgtgtgttgcggcgacagcaagcaaagtacttgtcaacgag
tacattttcaccatcgcccgtgggccgggagtttctcctcacgacttcggagctgttgcc
gtaattgacggtcagacgctcaaattcacccctttccggacggctaatgtgcctcctccg
atggcctttgacgaactcgaagtcgagtctcctattattgacgttacaatcggacgggat
tgcaactcgatggccgtgctgcaccgaggcggtgttagcttcttcgagcttatcatccag
ggaccacgggtgctacccccgaagcttgcctctacggcttccttcaggaagacacatgcc
cagttatacgaggaacatgtacttcaggttggcctgtctggctcaaatgaggttcacgtt
cttcaaatgtcggaagacatggagattgtcaggcacacatttgaaggcacacaaacaaac
gaacacgggtggcaaaagacggatgcaacttccatcacaaccattacaacacctatagtg
ccaccagttgtcgaggaagatggagtcattgctcaggattggcgtggcagactgagcaga
atcattgaaggagaacacctcccacttcctgccgagtttgccaacttcttgccctggaca
agttacattacacattcaggcgagttcctggcttttggacaggctcggaatggctacctc
tactgcaactcgacgctactggccaggaactgtacttcttttgttgttaccaagcatcat
cttatcttcacgactaccaaccacttcgtcaagtttgttcatttggctacggaagaagag
cttgaggttccccaggacgaccccgagaatgacgaacgatgccggagtatcgagcgggga
ggcaggctggtcgttgccatgcccagcaagatgagcattgtgcttcagatgcctcgtggc
aatcttgagacaatttatccccgggctatggttttgtccggcatccgcgaccttatcgag
gccaagaactatggcgctgcttttgcgacatgccgtactcagcgtgtggatatgaacctg
ctgtatgatcaccgaccggagcagttcctggagcacgtcggcttgttcttggagcaggtg
aaggatacggccaacattgacttgttcttgtccactctcaaggaggaggatgtcacccgg
actatgtacaaggacaccaaggctggctcagctccgcagtcgcaagaggctgaaacggct
gctaaagaaagcaagatcaacaagatctgtgatgctgttttggcaaagctcaagacccag
aagaacgccaacctccaaaacatcatcacagcgcatgtctgcaagaacccaccagccctc
gatgatggcttgcgcgtggttgccgatcttatgcaagaacatgaggcactagccgaacgt
gctgttgagcacatttgcttcctggtagatgtcaacagactctacgaccacgctctcggt
ttgtacaatctcgaacttactttgctggttgcccagcagtctcaacgtgatcccagagag
tatctcccatttattcaagaacttcacaagatgccagagctccagcgaaagtacacaatc
gacgacaagctcgggaaccacgagaaagccctggaccatctcaaggctcttggcgatttc
gaggaggtgaagacgtacaccgtcaagcacaaactctaccagcacgccttgagcatctac
cgtcacgacgagcagcaccaccgcgtgattaccgacctcttcgccgcccacctcaagtct
atctcccagtttaaggaagccggcctagcctacgagtcactcaacagctaccacgacgcc
acagactgttacctcaaagcgggcgccgcctgctggcgcgaatgcctctacgttgcccag
cagcaagacccgcccatcaccgctcagcgactagaagaagtagcaagcgaccttgccgac
gccctccgcgaagcaaaggactatgccgccgcggcaacaatccacatggagtacctctct
tctatcgaatccgccatccaatccctctgcaagggctacctctttgccgatgcgctccgg
cttgtcgccctgcacaagcgacgtgaccttcttgagagccatattgacagcggcctcgcg
gatgccttatcctccagcattgagttcttggctgattgcaaagcccaactcaaggcgcaa
gttccgcgcatccttgagctccgcaagaaggcaaaggaggacccgctggcgttttacgag
ggggagaacccctttgggagcaagaacgcggatggttatgacatcccggatgatatctct
attgctgctagctcgagggcgacgacgagcgcgtcgatgtttacgaggtataccggcaag
gctgggagcgtggggactgttggctccaatgtctcgagagcaacaagcaaaaataggagg
agggaggagaagaagagggcgagggggaggaaggggacggtttatgaggaggagtatttg
gttaatagtgtcaggaggttggtggagagggtggaggggacgaagggagaggtggagagg
ttggtctttgggttggtgaggagggatatgcaggagcgggcaagggttattgaggaggcg
atgggggttgtgctggaggggtgtaggcaggctgttggggaggtttggccgcaggaggag
aaacagcaagttgagggtgaaggggaggatggagaggggtggaggccggtgggcggggat
ggggtgctgtttgagagtttggaggctatgagggctaagcaaacggcgccggtggtgacg
gggttcgagaagttggcacttttggggggaaagaagtga
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