Podospora pseudocomata: QC762_307690
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Entry
QC762_307690 CDS
T09797
Symbol
ypt1
Name
(RefSeq) ras GTPase
KO
K07874
Ras-related protein Rab-1A
Organism
ppsd
Podospora pseudocomata
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppsd04131
]
QC762_307690 (ypt1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppsd04147
]
QC762_307690 (ypt1)
04031 GTP-binding proteins [BR:
ppsd04031
]
QC762_307690 (ypt1)
Membrane trafficking [BR:
ppsd04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab GTPases
QC762_307690 (ypt1)
Autophagy
Other autophagy associated proteins
QC762_307690 (ypt1)
Exosome [BR:
ppsd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
QC762_307690 (ypt1)
Exosomal proteins of other body fluids (saliva and urine)
QC762_307690 (ypt1)
Exosomal proteins of colorectal cancer cells
QC762_307690 (ypt1)
GTP-binding proteins [BR:
ppsd04031
]
Small (monomeric) G-proteins
Rab Family
Rab1/35 [OT]
QC762_307690 (ypt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
MMR_HSR1
FeoB_N
SRPRB
Gtr1_RagA
AAA_16
Septin
ABC_tran
AAA_29
AAA_22
AAA_7
AAA_5
TniB
AAA_25
AEP1
Motif
Other DBs
NCBI-GeneID:
87908972
NCBI-ProteinID:
XP_062745008
LinkDB
All DBs
Position
3:2732686..2734775
Genome browser
AA seq
203 aa
AA seq
DB search
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQ
IWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVG
NKSDMADKKVVDYQVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSSIATN
NTKANVNVSPGQGVSNNQSGGCC
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgaatacgactatctcttcaagctcctcctcatcggagactccggtgtcgga
aagtcttgcttgctcttgcggttcgccgacgacacctacaccgagtcctacatctccacg
attggcgttgacttcaaaatccggacgatcgaactcgacgggaagaccgtgaagctccag
atttgggatactgccggccaagaacgcttccgcacaatcacatcctcatactaccgtggc
gcgcacggcatctgcgtcgtctatgatgttaccgatatggacagcttcaacaacgtgaag
caatggctccaagaaatcgacaggtacgccaccgagggcgttaacaagctcctggttggc
aacaagagcgatatggcggataagaaggtggttgattaccaagtcgcaaaggaatttgcc
gacagcttgggcatcccattcctcgagacatcagcaaagaacgccagcaacgtcgagcag
gctttcttgaccatggctcgccagatcaaggagcgcatgggcagcagcattgccaccaat
aacaccaaggcgaacgtcaacgtgtcgcctggacagggtgtctccaacaaccagtccggt
ggctgctgctaa
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