Podospora pseudocomata: QC762_308060
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Entry
QC762_308060 CDS
T09797
Name
(RefSeq) hypothetical protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QC762_308060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsd03019
]
QC762_308060
Messenger RNA biogenesis [BR:
ppsd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
QC762_308060
mRNA degradation factors
5'-3' decay
Lsm complex
QC762_308060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
87909007
NCBI-ProteinID:
XP_062745046
LinkDB
All DBs
Position
3:2851327..2852785
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AA seq
193 aa
AA seq
DB search
MEHLSIHDHQHGPPPPGMMPQPPQHPGGPVPQGMMPPGLGRPPQPQQLPAQMFTTAAQLL
DLTDKKLLISLRDGRKLIGILRSWDQFANLVLQSTKERIFVPPVLSEKEPTGIFADIDRG
TFLVRGENVLLLGEIDLDKDDDAPPGYQLADIKMVEKLARERKKEEKVKEKKKTKMLGKE
GFEGENLGEMPLI
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggagcacctctcaatacatgaccaccaacacggccctcccccccctggaatgatgccg
caaccacctcaacatccaggcggccctgtaccccagggcatgatgcccccgggactcggc
cgccctccccagccccagcagttgccagcccagatgtttaccactgctgctcagctgttg
gatctcacagataaaaaactcctgatctccctccgcgacggccgtaaattgataggcatc
ctccgcagctgggatcaatttgccaacctcgtcctccaatccacaaaagagcgcatcttc
gtcccccccgtcctctcggaaaaagagccaaccggcatcttcgccgacatcgaccggggt
acgttcctagtcagaggcgagaacgtcttgttgcttggagaaatcgatctcgacaaggac
gacgatgcgcccccggggtatcagctggccgacataaagatggtggagaagctcgcgagg
gagaggaagaaggaagagaaggtcaaggaaaagaagaagaccaagatgctggggaaggag
ggctttgagggggagaatttgggggagatgccgctcatctaa
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