KEGG   Podospora pseudocomata: QC762_308060
Entry
QC762_308060      CDS       T09797                                 
Name
(RefSeq) hypothetical protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
ppsd  Podospora pseudocomata
Pathway
ppsd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ppsd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QC762_308060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppsd03019]
    QC762_308060
Messenger RNA biogenesis [BR:ppsd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     QC762_308060
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     QC762_308060
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 87909007
NCBI-ProteinID: XP_062745046
LinkDB
Position
3:2851327..2852785
AA seq 193 aa
MEHLSIHDHQHGPPPPGMMPQPPQHPGGPVPQGMMPPGLGRPPQPQQLPAQMFTTAAQLL
DLTDKKLLISLRDGRKLIGILRSWDQFANLVLQSTKERIFVPPVLSEKEPTGIFADIDRG
TFLVRGENVLLLGEIDLDKDDDAPPGYQLADIKMVEKLARERKKEEKVKEKKKTKMLGKE
GFEGENLGEMPLI
NT seq 582 nt   +upstreamnt  +downstreamnt
atggagcacctctcaatacatgaccaccaacacggccctcccccccctggaatgatgccg
caaccacctcaacatccaggcggccctgtaccccagggcatgatgcccccgggactcggc
cgccctccccagccccagcagttgccagcccagatgtttaccactgctgctcagctgttg
gatctcacagataaaaaactcctgatctccctccgcgacggccgtaaattgataggcatc
ctccgcagctgggatcaatttgccaacctcgtcctccaatccacaaaagagcgcatcttc
gtcccccccgtcctctcggaaaaagagccaaccggcatcttcgccgacatcgaccggggt
acgttcctagtcagaggcgagaacgtcttgttgcttggagaaatcgatctcgacaaggac
gacgatgcgcccccggggtatcagctggccgacataaagatggtggagaagctcgcgagg
gagaggaagaaggaagagaaggtcaaggaaaagaagaagaccaagatgctggggaaggag
ggctttgagggggagaatttgggggagatgccgctcatctaa

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