Podospora pseudocomata: QC762_308330
Help
Entry
QC762_308330 CDS
T09797
Name
(RefSeq) hypothetical protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
ppsd
Podospora pseudocomata
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppsd03041
]
QC762_308330
Enzymes [BR:
ppsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
QC762_308330
Spliceosome [BR:
ppsd03041
]
Complex C
Other components
Complex C specific factors
QC762_308330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
DEAD
AAA_30
AAA_29
AAA_23
AAA_16
Motif
Other DBs
NCBI-GeneID:
87909032
NCBI-ProteinID:
XP_062745075
LinkDB
All DBs
Position
3:2963452..2965723
Genome browser
AA seq
647 aa
AA seq
DB search
MADFDLGASFIPALYKPAALLPIAKHREALLYLIETSPVTIVVGQTGSGKSTQIPQFLEQ
AGWCADGKIIGVTQPRRVAATTVAMRVAEEVGCEVGKEALVDPLLSRYSVVMVDEAHERS
ISSDILLGLLKKVRRKRPELRIIISSATLQAEDFRDFFSESNEEAPRDDKDAAKVASIIS
LEGRTYPIDILYLEQPAEDYLEKAVSTVFDIHANEPKGDILVFLTGRDEIEKAVQAVAER
SAQLPPGSDSLLPLPMYAGLSTEQQNYIFEETTENFRKVIFSTNISEASVTIDGIVYVVD
SGFVKLRAYNPQTGIESLTATPVSKASAAQRSGRAGRTKPGKCYRLYTDEAYQALPDANV
PEIQRSNLAPFVLQLKALGIDNVLRFDFITPPPAELMVRALELLYSLGALDEYSKLTKPL
GLRMAELAVEPMMSKTLLSAPSFGCLSEILTIAAMTSVGGTIWIQHDGEKKKTESAKRKF
STEEGDHLTLLNVYQAFVTNGRKEARFCHENMLNFKAMSRAVSIRAQLKRSLERFGVVVD
ESLASGSTSSTAAGSASINKAEQIRRCLTSGYFAHAARMQPDGSFKNVSGTTVLHAHPSS
IMFNRKADWVIFHEVMETGDKTYIRDITKVEKNWLLEYAPDFYKTST
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggccgactttgatcttggagcgtcttttattcccgccttgtacaagccggcagccctg
ttgcctattgccaagcatcgagaagccctcttgtacctgattgaaacttcccctgtcact
atcgtcgtgggtcaaaccggctcaggcaaaagtactcagatcccccaatttctcgagcag
gcaggatggtgtgctgatggcaagattatcggagtgacacagcctcggcgtgttgcagca
accaccgttgccatgagagttgcagaagaggttggttgtgaggtgggcaaggaagcactg
gtcgaccctctcttgtctcgatactcggtcgtcatggtcgatgaggcccatgagcgatcc
atcagttctgatatcctcctcgggttactcaaaaaagttcgcaggaagagacctgagctc
aggattatcatcagcagcgccacgctccaagccgaagactttcgagacttcttttcggag
tccaacgaagaagcaccaagagacgacaaagatgccgcaaaggttgcctccatcatcagc
ctcgagggcagaacctaccccatcgacatcttgtacctggagcaaccagccgaggattac
ctcgagaaggctgtttcaaccgtctttgacattcacgctaacgagccaaaaggcgacatt
ctcgtgttcctgacgggaagagacgagatcgaaaaagctgtccaggctgttgcagagcga
tcagctcagctccctccaggatccgattccctcctgcccctaccaatgtatgctggtcta
tcgacagagcagcaaaattacattttcgaggagaccacagagaacttcaggaaggttatc
ttctctaccaacatttccgaggcatctgtgacgattgacggaatcgtctacgtagtcgat
tctgggttcgtcaagctgcgcgcctacaaccctcaaactggcatcgagagtctgacagcc
acgccagtctcgaaggcatccgctgctcaaaggtcagggcgtgcaggccgaaccaaacct
ggaaagtgctacagactctacaccgatgaagcttaccaagctttgcctgacgccaacgtg
cccgaaattcaacgctcgaacctggctcctttcgtcctccagctcaaagcgctggggata
gacaatgtccttcggtttgacttcatcacaccgcccccagcagaactgatggtcagggca
cttgaactgctctactcgcttggggcgctggatgaatactccaaactgacaaaacccttg
ggcctgaggatggcagagttggcagtggaacccatgatgagcaagaccctcctctcggca
ccctcttttggctgcttgagcgagatattgacgattgccgccatgacaagcgttggtggg
acgatatggatccagcatgatggcgagaagaagaagacggagagcgcgaagcggaagttc
tcaaccgaggaaggagaccatctaaccctcctgaatgtataccaggcctttgtgaccaat
ggccgcaaggaggcacgtttctgccacgaaaacatgttgaatttcaaggcaatgtcgcga
gcagttagcattcgagcccagctcaaacgttctctagagcgatttggagtcgtagtcgat
gaatcgcttgcgagcggttccacatcctcgaccgctgctggctcggcctccatcaacaaa
gcagaacagattcgacgctgcttgacctcgggctacttcgcccacgcagcgagaatgcag
ccagatggatctttcaaaaacgtgtctgggacaacggtccttcatgctcacccgagctcg
atcatgttcaaccgcaaggctgactgggtcatctttcacgaggtgatggaaaccggcgac
aagacttatatcagagatatcaccaaggtcgagaagaactggctgctggagtacgctccc
gacttttacaagacgtcgacttga
DBGET
integrated database retrieval system
