Podospora pseudocomata: QC762_308900
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Entry
QC762_308900 CDS
T09797
Symbol
VPS20
Name
(RefSeq) Vacuolar protein sorting-associated protein 20
KO
K12195
charged multivesicular body protein 6
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03250
Viral life cycle - HIV-1
ppsd04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
QC762_308900 (VPS20)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
QC762_308900 (VPS20)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppsd04131
]
QC762_308900 (VPS20)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppsd04147
]
QC762_308900 (VPS20)
Membrane trafficking [BR:
ppsd04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
QC762_308900 (VPS20)
Exosome [BR:
ppsd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
QC762_308900 (VPS20)
Exosomal proteins of other body fluids (saliva and urine)
QC762_308900 (VPS20)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
Motif
Other DBs
NCBI-GeneID:
87909091
NCBI-ProteinID:
XP_062745142
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All DBs
Position
3:complement(3168613..3169914)
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AA seq
214 aa
AA seq
DB search
MGGNSSKITAQDQAIYDLKLQRDRLHQYQRRITLLTSRETEIARALLAQNNRPRALLALR
RKKYQESLLAKTDQQLEQLEKLVSSVEFALIQKDVVFGLQQGTKVLKEIHAEMGGIDKVE
KLMGETAEEVEYQREVSEMLGGRISVQDEEEVEEELAALERELGEPKKKKEETPSRVVVE
GELPDVPGTELPAGEQRQEGVKKPVAERREAVAA
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcaactcgagcaagataacagcccaagaccaagcaatctacgacctcaaactc
caacgcgatcgcctccaccaataccaacgccgcataacccttctcacctcccgggaaacc
gaaatcgcccgcgccctcctcgcccaaaacaaccgtccccgcgccctcctcgccctccgc
cgaaagaaataccaagaatccctcctcgccaaaaccgaccagcaactcgagcagctagaa
aaattggtatcttctgtagaattcgcactcatccaaaaagacgtcgtctttgggttgcag
caggggacaaaagtcctcaaagaaatccacgccgagatgggcgggatcgacaaggtggaa
aaactgatgggggagacggcggaggaggtcgagtaccagagggaggtgagcgagatgttg
gggggcaggatcagtgtccaggatgaggaggaggtggaggaggagttggctgcgttggag
agggagttgggagaaccaaagaagaagaaggaggagactcctagtagggtggtggtggag
ggggagttgcctgatgtgccggggacggagttgcctgctggagagcagaggcaggagggg
gtcaagaaaccggttgctgagaggagggaggcggttgctgcttga
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