KEGG   Podospora pseudocomata: QC762_309200
Entry
QC762_309200      CDS       T09797                                 
Name
(RefSeq) hypothetical protein
  KO
K14315  nucleoporin NDC1
Organism
ppsd  Podospora pseudocomata
Pathway
ppsd03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ppsd00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    QC762_309200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppsd03019]
    QC762_309200
Messenger RNA biogenesis [BR:ppsd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     QC762_309200
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 87909122
NCBI-ProteinID: XP_062745174
UniProt: A0ABR0GKS3
LinkDB
Position
3:complement(3253193..3256641)
AA seq 673 aa
MAGATAAKVRVLPYKDFLQPALQRRFATSGLVILVVAYLEALLLASWDSFLWAWFPLGPA
GIRTFFFFLCGVLIITLRIAQHHPGVRTTSSPFATFLDSLRSFNTLETILTYAFSAWAFS
QVYLWCLSEDAGLEYISYYHADRARLNEKAVFLTTHCVLVGVWHGLRHLFSDVDRLHYGI
AKPPPRDADKKADKKVNADDGDFNTQLQKLAQKLPEIVVFTLTQALTSTTVTMITYSVFL
RGFVWRFTMSLFRPVYNLPKTNMTPMTLPFSLTIILRCLWTSVLLTFVWTLGNEAFSLFM
VKNPLKNNKPLTSESRDPNGSLLNGLKAKKLSIQCFAMWELAYIARDFPDRRKAIYEDID
RKNGPMWSQIYKICIDVLKQIETRIDNYEKYGKPTVPNPALDLDRNRAPEKKRLTETVPR
DEEVFQSSPQRRGYREAIERTVGKIATDPGQPSQLSPRARKIAEFAKGELIKAQKQATGT
DDTEGLAKDFATKFVESPFGWPFRQTYRRGVAKVLLGEPFGEVSLYANAAFALSGLAVRS
LQEDKYGYVQRDVAGLVRTLTGLVRKVEGFREGVVVSWTDVEGRRESREVEEILEGLKWS
LRGVVDGFGDYARDVGLSLGDLRLAREAAGVKKAVREEEEKEVKGRRLRLAGGETAAAGV
KITEEEVMGRRLR
NT seq 2022 nt   +upstreamnt  +downstreamnt
atggcgggtgccacggctgcgaaagtgagggtgctgccgtacaaggatttcctccaaccc
gcgctgcagcggaggtttgcgacgagcgggttggtgatcttggtggttgcctacttggag
gccctgcttctggccagttgggattcattcctctgggcgtggttcccccttggcccagcc
ggcattcgaacattcttcttctttctctgcggcgttctcatcatcacccttcggatcgcc
caacaccaccccggtgtccgcaccacgagctctccctttgccaccttcctcgacagcctc
cggtccttcaacacgctcgagacgattctcacgtatgcgttttcagcgtgggcctttagt
caagtctacctgtggtgtctgtctgaggacgcagggctggagtacatctcctactaccac
gccgatcgcgcgagattgaacgagaaggccgttttcttgaccacacactgcgtgttggtg
ggagtatggcacggtctcagacatctgtttagcgacgtcgaccggttgcactacggcatc
gcgaagcctccaccccgggacgcggacaagaaggcggacaagaaggtcaatgccgacgat
ggagactttaacacgcagctccagaagctggcgcaaaagttgcccgagattgtcgtcttc
accttgacgcaggccttgacgtccaccacggtcaccatgatcacgtactcggttttcttg
cgggggtttgtctggaggtttaccatgtcgctcttccggcccgtctacaacctccccaag
accaacatgacgcccatgacgcttccgttttcgttgaccatcatcctgcggtgcttgtgg
accagcgtgctactcacgtttgtgtggacgctcggcaatgaagccttttcgctgttcatg
gtcaagaacccgcttaagaacaacaagccgctcacctcggagtcgagggaccctaacggc
agtcttctgaacggattgaaggccaagaagctgtccattcagtgctttgccatgtgggaa
ctagcctacatcgcccgcgacttccccgaccgccgcaaggccatctacgaggacattgac
cgcaagaacggccccatgtggtcccagatctacaagatctgcatcgacgtcctcaagcag
attgaaacaagaatcgacaactacgaaaagtacggcaaacccaccgtcccgaatccggcg
ttggatctcgaccgaaacagggcccctgaaaagaaacgtctcactgaaacggtccccaga
gacgaggaggtcttccagtcttctccccagagaaggggctaccgggaggcgatcgagcgg
acggtggggaaaattgctaccgatccggggcagccgtcgcagctcagtccgcgggcgagg
aaaatcgccgagtttgccaagggggagctgatcaaggcccagaagcaggccacggggacg
gacgacacggagggtttggccaaggactttgcgaccaagtttgtagagagcccgtttggt
tggccgtttagacagacgtaccgcagaggggtggcaaaggtgctgctgggggagccgttt
ggggaggtgagcctgtatgcgaacgctgcatttgcgcttagtgggctggcggtgaggagt
ttgcaggaggacaagtatgggtatgtgcagagggatgtggcggggttggtgaggaccttg
acggggttggtgaggaaggtggagggtttcagggagggggtggtggttagctggacggat
gtggaggggcggagggagtcgagggaggtggaggagatattggaggggttgaagtggagt
ttgaggggggtggtggatgggtttggggattatgctagggatgttgggttgagtttgggg
gatttgaggttggcgagggaggcggccggggtgaagaaggctgtcagggaggaggaggag
aaggaggtgaaagggaggcggttgaggttggctgggggggagacggcggcggcgggggtg
aagattacggaggaggaggtgatggggaggcggttgaggtag

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