Podospora pseudocomata: QC762_311490
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Entry
QC762_311490 CDS
T09797
Symbol
RFC3
Name
(RefSeq) Subunit of heteropentameric Replication factor C (RF-C)
KO
K10756
replication factor C subunit 3/5
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03030
DNA replication
ppsd03410
Base excision repair
ppsd03420
Nucleotide excision repair
ppsd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QC762_311490 (RFC3)
03410 Base excision repair
QC762_311490 (RFC3)
03420 Nucleotide excision repair
QC762_311490 (RFC3)
03430 Mismatch repair
QC762_311490 (RFC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsd03032
]
QC762_311490 (RFC3)
03036 Chromosome and associated proteins [BR:
ppsd03036
]
QC762_311490 (RFC3)
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
QC762_311490 (RFC3)
DNA replication proteins [BR:
ppsd03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
QC762_311490 (RFC3)
DNA Replication Termination Factors
ELG1-RFC complex
QC762_311490 (RFC3)
Chromosome and associated proteins [BR:
ppsd03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
QC762_311490 (RFC3)
DNA repair and recombination proteins [BR:
ppsd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
QC762_311490 (RFC3)
Check point factors
HRAD17(Rad24)-RFC complex
QC762_311490 (RFC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_22
RCF1-5-like_lid
AAA_30
AAA_24
AAA_16
AAA_11
DUF815
AAA_5
AAA_19
AAA_14
RuvB_N
AAA_3
AAA_28
DEAD
ResIII
PhoH
SLFN-g3_helicase
Sigma54_activat
DNAX_ATPase_lid
Mg_chelatase
AAA_7
ATPase_2
AAA_18
bpMoxR
TniB
AAA_25
nSTAND3
RNA_helicase
AAA_2
Motif
Other DBs
NCBI-GeneID:
87909355
NCBI-ProteinID:
XP_062745373
LinkDB
All DBs
Position
3:3874813..3877034
Genome browser
AA seq
389 aa
AA seq
DB search
MSDFEDEMDIDVPVSKDVTFSSSNAAKGKRSAANLPVEAEDSLPWVEKYRPVSLDDVSGH
QDILATINKFVDSNRLPHLLLYGPPGTGKTSTILALARRIYGAENMRQMVLELNASDDRG
IDVVREQIKTFASTKQIFSLGASTSKTGLAGFKLIILDEADAMTSTAQMALRRIMEKYTV
NTRFCIIANYSHKLSPALLSRCTRFRFSPLKERDIRVLVDKVIDEEHIKIKPEAADALVK
LSKGDMRRALNVLQACHASSTPLPPKDAPKIPEDQIVRETITVDTIYMCVAAPPPDVIKK
IMNTLLSTSDVTACLAAVNSVKVTQGLALADIITALSEELVKLEVKPEVMITWLDLLAQV
EHRVAGGASEVIQTGAVVGAVRNGVELMG
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacttcgaagatgagatggacattgatgtccccgtctccaaagacgtcaccttt
tcctccagcaatgcagccaagggcaagcgcagtgccgccaatctcccagtcgaagccgaa
gacagccttccatgggtcgaaaagtatcgtccagtctccctcgacgacgtctctggccac
caagacatcctcgctaccatcaacaagttcgtcgactcgaaccgccttccacatctcctt
ctttatggtccacccggcaccggaaaaacatccaccatcctcgccctggcccgacgaatc
tacggtgccgagaacatgcgccagatggtcctcgagctcaacgcctccgacgacagaggt
atcgatgtggtccgcgagcagatcaagacctttgcctcaacgaaacagatctttagtctt
ggagcatcgacctccaagacaggacttgccggtttcaagctgatcattcttgacgaggcc
gacgccatgacgagcacagcccagatggcgctgagacgaatcatggagaagtacactgtc
aacacccggttctgcattattgccaactactcccacaagcttagcccggcgctgctgtct
cggtgtacaagatttcggttcagtcccttgaaggagcgggacatcagggtgctggtagac
aaggttatcgacgaggagcacatcaagatcaagcctgaagcggccgacgcgctagtgaag
ctcagcaaaggtgatatgagacgagcgctgaacgtgttgcaggcttgccatgcgtcaagt
acacccctcccaccaaaagacgcccccaaaatccccgaagaccaaatcgtccgcgaaacc
atcacggtcgacacaatctacatgtgcgtcgccgcgccaccaccggatgtcatcaagaag
atcatgaacacgctgctcagcacgagcgatgtgacggcctgcttggcggccgtcaacagc
gtcaaggtcacacaagggttggcgttggcggatatcatcactgcgttgtcggaggagctg
gtcaagttggaggtaaagccagaagttatgatcacctggcttgacctacttgcccaggtg
gagcatcgggtagcaggcggcgcctcggaggtcatacagactggggctgtcgttggggca
gtaaggaatggagtagagttgatgggttga
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