Podospora pseudocomata: QC762_403110
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Entry
QC762_403110 CDS
T09797
Symbol
RIB2
Name
(RefSeq) DRAP deaminase
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
ppsd
Podospora pseudocomata
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppsd03016
]
QC762_403110 (RIB2)
Enzymes [BR:
ppsd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
QC762_403110 (RIB2)
Transfer RNA biogenesis [BR:
ppsd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QC762_403110 (RIB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Auto_anti-p27
Motif
Other DBs
NCBI-GeneID:
87909663
NCBI-ProteinID:
XP_062743325
LinkDB
All DBs
Position
4:complement(1129561..1131000)
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AA seq
479 aa
AA seq
DB search
MTASILLPGAPSQPLTAVVAENNKVVESTGAISYTEPSLISQPEHSASLGPPHLYFFKDG
LRRVAPYFYTYNTWCKERWRGRKIIEVFESEFRERSVEYYRAAMESGQVAVNGKIVSPDY
VMVNGDLVSHTTHRHEPPVTQDPVQVIHEDDDMIVINKPSGVPVHPAGRYHYNSVVEIMK
AERGPTFAPRPCNRLDRLTSGIMFIAKTAKAAESLSAQIFRRSVRKEYLARVVGRFPDGE
VVCDQPILQISPKLGLNRVRANGKSAKTVFKRLAYYPSPIIKPSSSNSPSPDEAETGGPG
DHFTRETEGYSIVRCLPVTGRTHQIRVHLQFLGHPVQNDPIYANQKVWGFDLGRNDAEAT
LNTDEDVLSRLARMGKEQVADAVAYYDEMVDVYHKKKAERMSGQLCDVCETPLYTDPGSQ
ELSLWLHSLRYEDADGSWSYVSPLPAWAMPPEGASGPTQVGGMDDLVDAAGEDMKIEVS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcctccatcctcctgcctggtgcaccgtcacaaccgctgaccgctgtggtcgct
gagaacaacaaagtcgtagaatctactggcgccatcagttataccgaaccaagcttgatc
tcgcaacccgagcattcagcctcgctgggccctccacatctatacttcttcaaagatggt
cttcgacgggtggccccttatttctacacatataacacctggtgcaaggagcgatggcga
ggaagaaaaatcattgaagtgtttgaaagcgagtttcgcgagcgatcggtcgagtattac
cgtgcggcgatggagtctggtcaagtcgcggtcaatggcaaaatcgtgagcccggattat
gtgatggtgaacggcgacctggtttcgcataccacacatcggcacgagcctcccgttaca
caagatcccgtgcaggtcatccacgaagacgacgacatgatcgtgatcaacaagccctcg
ggcgtgccagtacaccctgccggtcgataccattacaactcggtggtggagattatgaag
gccgagagggggccgacctttgcgccccgaccatgcaaccggctcgacaggctgaccagc
ggcatcatgtttattgccaagacggccaaagctgccgaaagtcttagtgcccagatcttc
agacgcagtgttcggaaagaatatcttgcccgtgtggtcggtcgatttcctgatggcgag
gttgtctgcgaccagccgatccttcaaatttctccaaaactgggcttgaaccgggtccga
gctaatggcaagtctgcgaagactgtcttcaagcgccttgcttactatccgtcgcccatc
atcaaacctagttccagcaacagcccgtcgccggatgaggcagagacaggcggtcccgga
gaccatttcactagagaaaccgagggatattcaattgtccgctgcttgcccgtcacaggc
agaacacatcaaattcgggttcacctacagtttctaggtcatcctgtacagaacgatcca
atctatgccaaccagaaggtttggggcttcgacctggggcgcaatgatgccgaagcaacc
ctgaataccgatgaggatgttctttcccgcctggcacggatgggaaaggaacaggttgcg
gacgctgtggcgtactatgacgagatggtggacgtgtatcacaagaagaaggcggaaagg
atgtcgggccagctttgtgatgtttgcgaaaccccgttgtataccgatccaggcagccag
gagctctctctgtggctgcatagtctccggtacgaggatgccgatgggtcctggagttat
gtgagcccactgccagcctgggccatgccgcccgaaggcgcaagcggaccaacacaggtt
ggcggcatggacgatctagtggatgctgccggggaggatatgaaaatcgaagtctcatag
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