Podospora pseudocomata: QC762_404960
Help
Entry
QC762_404960 CDS
T09797
Symbol
HFM1
Name
(RefSeq) ATP-dependent DNA helicase MER3
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
ppsd
Podospora pseudocomata
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppsd03036
]
QC762_404960 (HFM1)
Enzymes [BR:
ppsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QC762_404960 (HFM1)
Chromosome and associated proteins [BR:
ppsd03036
]
Eukaryotic type
Meiosis-specific proteins
Others
QC762_404960 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Sec63
ResIII
SNRNP200_wHTH
Helicase_C
HHH_5
UvrD-helicase
AAA_30
T2SSE
AAA_22
AAA_19
Cdd1
nSTAND3
Motif
Other DBs
NCBI-GeneID:
87909858
NCBI-ProteinID:
XP_062744049
LinkDB
All DBs
Position
4:complement(3490274..3495182)
Genome browser
AA seq
1471 aa
AA seq
DB search
MSRPWRPNRPHVAKRNRVVPVPDDSVRFRDASRDNRHSHNHRCASEMDPRTPDQFRYLNQ
PTQFDDRLGDAYAIEQDPEYQQIIAGLSRHTAPHMTERHVSPPYQNANTPGPFQSQHHPA
HNVSQPRHHLSQRQPLASYSVSPVLEPSARSWSHANYSPPPGSTTHTQPYHTSFATTTAT
QPDITHLQPLPTPSTTREHVPSQRQGTTPVVRGIRLVNLREALPDKFRALFPFEFFNAVQ
SKCFEAVYKTNNNVVVSAPTGSGKTAILELAICKLALDRGHENFKIVYQAPTKALCAEKA
RDWEKKFGHMKLKCAELTGDTSQAEMRRVGDASIIVTTPEKWDSITRKWQDHRRLLQLVE
LFLIDEVHILKDVRGATLEAVVSRMKTIGTNVRFIALSATVPNSDDIAQWLGRDHTNQHL
PALRETFGEEFRPVKLQKFVYGYECNGNEFILDKLLDSKLPNLIARHSQQKPILVFCFTR
KSCESTASLLAEYAAARPNAKLWPAPKGRIPVISRELQEIVKLGVAFHHAGLDVQDRGAV
EQSFLKGELGVICCTSTLAVGINLPCHTVVLKGTMSYADDKLQECSDLEVMQMLGRAGRP
QFDDSATAIILTKAGNKARYEKMVSGQEILESTLHLNLIEHLNSEIGLGTIHDLASAKKW
LSGTFLSVRLRRNPSFYHLTGSNCNPSQIDAKLEEICERDIKQLQEAQCVTDNETFKSTY
YGRAMSKYMVEFSTMKMLLQIPKAVKMGPLLTILSQASEFKEFRFKPAERPLFREMNQSP
LIVYPIKEAVTQTWHKISLMVQAHLGSVQYPDSADAAKARRQLVLERKIVFERLSRLVHA
VIDCKGNDYDAIGMKNALELARALAAESWEGRVTQLTQVPSIGPVGMRKLASKGIRTVLE
LADMDSVDIERLMARQTPFGMTIKSSLEKFPRLSFDLELVSHKSQPRPTGATVGVEVRAN
LRYLNRLGPPYWKKKTPDINFLAETTSGTLSFFWRGSMRKLEVSKETGYELKFWVGLQNV
DDDIVCHFTCEEIVGTMISKTLKHNIPASAFPKQAAFSTVPSSWAPPATAKFTQPRTIDG
SNDADQMDELDDGGIDDSDFILAAEQAAARLALRPQSSFTTPSIQAPRLMMEGQKDAQAD
QYPGIHELVEMAQEEASSQPESDTSPPVQLPSGKWQCNHNCAGGTLTKTGKPCTHRCCKE
GLDKPRKRAPPKPKVKRTAEEAWDGSKNSPQAAGDRKRPKIESVSRPGATQQAPGVRPPV
RSAAVDWNAYGFTEEDLECIDLSSYTDDEGDSATTKAEQNVITKSKPKRANEVRTAAQPP
HHSETDDEADLPSLDELCAANTSVIRKTPGAAWPRFQMPFTDPTAFRPGASDVVLFEGIA
KKFEISNTSKDLNSDEGDTPYPSSSPMFVYQESPASSNMSTNETMAVTREKQMKEEVRSG
RTSWPDGLPEWVKVDSNREIVDFFGPCVTYV
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggccatggaggcccaaccgaccccatgttgcgaaacgcaatcgtgtcgtgcca
gtacctgacgacagtgtacgtttccgggacgcttcccgagacaaccgtcactcacacaac
caccgctgcgcctcggagatggatccccggaccccggaccagttccgctacttgaaccag
ccgacgcaatttgatgatcgactgggagacgcctacgccattgaacaagaccccgaatac
caacaaatcattgccggtttatcgagacacaccgccccacacatgacagagagacatgtt
agtcctccataccaaaacgcaaacactcctggcccctttcaatcgcaacaccacccagcc
cacaacgtctcgcagcctcgccaccacctatcgcaacgacaaccattggcttcatattca
gtctctcccgtcctcgagccttccgcccgcagttggtcgcatgcgaactacagccccccc
ccagggtcaactacccacacgcaaccgtatcacacgtcgtttgcaactacaacagctacc
caaccggacattacacaccttcaaccccttccaactcccagtaccacgcgagagcacgtt
ccctctcaacggcagggtactacgcctgttgttcgcggtatacgcctcgtcaacttacga
gaggccctgccagacaagttccgcgccctgttcccctttgaatttttcaatgcagtacag
tccaagtgcttcgaggcagtgtacaagaccaacaacaatgtggtggtctcggcacccacc
ggtagtggaaagactgccatcctcgagttggcaatttgcaaacttgctctcgatcgcggc
cacgaaaacttcaagattgtgtaccaagcacccaccaaggccttgtgtgccgaaaaggct
cgcgattgggaaaagaagtttggccacatgaagctcaagtgcgctgagctcaccggggac
acttcccaggccgagatgcggcgcgttggcgatgcttcgatcattgttaccaccccagag
aagtgggattcgattacacgaaaatggcaagaccatcgcaggcttctgcagctggtcgag
ctattcctcatcgacgaggttcatattctcaaggatgtccgcggcgccacgttggaagca
gtcgtttcccgcatgaagaccattggaaccaatgttcgatttatcgctttgagcgccacc
gttcccaactcggatgatattgcccaatggcttggccgggaccataccaaccagcacctg
ccggcactgcgagagacatttggtgaagagttcaggcctgtcaaactgcaaaagttcgtt
tatggatacgagtgcaacggcaacgagttcatccttgataagctgcttgactccaaactc
cccaacctgattgccaggcattctcaacagaagcccatactggtgttttgcttcacacgg
aaatcctgcgagtcaacggccagtctgctggccgaatatgctgctgccaggccaaatgcg
aagctgtggcctgcccccaaaggccggatccccgtcatcagccgagagctgcaggagatt
gtcaaattgggtgtagcattccaccatgctggtctcgacgttcaagatcgaggtgctgtt
gagcagtcatttctcaagggagaactaggtgtcatatgttgcacgtcgacattggccgtt
ggcattaacctgccatgccacacggttgtgttgaaaggaacaatgagctacgcggatgac
aagcttcaggagtgttctgatctcgaagtgatgcaaatgctaggtcgagcgggacgcccc
caatttgatgacagcgccactgccatcatcctgaccaaggccggcaacaaggcacggtac
gaaaagatggtgtccggacaagaaatcctcgagagcacgcttcatctcaatctgatcgaa
cacctcaactccgagataggtctgggcaccatccacgatctcgcgtctgcaaagaagtgg
cttagcggcacgttcttgagcgtccggcttcgacgcaacccaagcttttaccacttgact
ggcagtaattgcaatcccagccagatcgacgccaagctggaagagatatgcgagcgcgac
atcaagcaactgcaagaggcccagtgtgttaccgacaacgagacattcaaatcaacctac
tacggccgcgccatgtccaagtatatggttgagttttccacaatgaagatgctgttgcag
attcccaaggctgtcaagatgggcccactgctcaccatcctttcacaagccagcgagttc
aaagagtttcgtttcaagcccgccgagaggcctttgtttcgcgagatgaaccagtccccc
ctcatcgtttatccaatcaaggaagcggtcacgcaaacatggcacaagatctccttgatg
gttcaggcccatttgggaagcgttcaataccccgactcggccgatgcagccaaggctcga
cgtcaactggtcttggagcgcaaaatcgtgtttgagcgactcagccgccttgtccacgcc
gtgattgactgcaaaggaaacgactatgatgcgattggcatgaagaatgccctcgagctt
gcgagagccctcgctgcagagtcatgggaaggtcgggtgacacaactgacccaggtaccc
agcattgggcccgttgggatgcgtaagcttgccagcaaaggcatccggacagtgttggaa
ctcgccgacatggacagcgtcgacattgagagattgatggctcggcagacccccttcgga
atgactatcaagagctctcttgaaaagtttccccggttgagcttcgatctggagctagtc
agccacaagtctcaacctaggccaacaggcgccaccgttggggtggaagttagggctaac
ctacggtatttgaatcgactcggtccaccgtattggaagaagaagacacctgacatcaac
ttcctggccgaaactaccagcgggactctttcgttcttttggcgaggcagcatgaggaag
ctggaggtcagcaaagagacagggtacgaattgaagttctgggttggtctccaaaatgtt
gatgacgacattgtgtgtcactttacttgcgaggagattgttgggacgatgatatccaag
acactgaaacacaacattcctgcctcagcatttcccaagcaagccgctttctccaccgtg
ccctcgagctgggctccgccagcgacagccaagttcactcaaccacggacgattgatggc
agcaatgatgctgatcagatggacgagctggacgatggtggtattgacgactctgacttc
attctcgccgctgagcaggcggctgctcggttagcactgcgcccacagtcatcattcacc
acgccatctatccaagcacccaggcttatgatggagggccaaaaagacgctcaggcggat
cagtatccaggaatccatgagttggttgagatggcacaggaagaggcttcctctcaacct
gagtccgatacatcccccccagtccagcttccaagcggaaagtggcagtgtaatcataac
tgtgcgggtgggactcttacaaagacgggcaagccatgcactcacagatgttgcaaagag
ggacttgacaagccacggaagcgggcaccgcccaaaccaaaggtcaagcgcacggccgag
gaggcctgggatggttctaagaattcccctcaagctgcgggcgataggaagcggcccaag
attgagtcggtatcacggcccggtgccactcaacaggcaccaggcgtccgcccgcctgtt
cggtctgccgcagtagactggaatgcgtacgggttcacagaggaggatctggagtgtatc
gatctttcatcctataccgatgatgaaggcgattccgctaccaccaaggcagagcagaat
gtaataacaaagtccaagcccaaacgagcaaatgaagtccgtacagccgcacaacctcct
caccattcagagacggacgatgaggccgacttgcccagtctggacgagctttgtgcagcg
aacacgtcagtcatacggaaaacgcccggtgcggcctggccgcgatttcaaatgcctttt
acagatccaacggccttcagacctggcgcctctgacgtggtgttgtttgaaggcattgcc
aaaaagtttgaaatttcaaacacctccaaggacttgaactctgatgagggtgatacaccc
taccctagcagttcgccaatgtttgtgtaccaagaatcgccagcaagctcgaatatgtcg
acgaacgaaactatggcggtcactcgcgaaaagcagatgaaggaggaggttcggtctggc
aggacctcgtggccggacggcttgcccgagtgggtgaaggtcgactccaatagggagatt
gtggatttctttgggccgtgtgtaacatatgtatga
DBGET
integrated database retrieval system
