Podospora pseudocomata: QC762_406940
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Entry
QC762_406940 CDS
T09797
Symbol
rcd1
Name
(RefSeq) RNA-binding protein, CCR4-NOT complex subunit Rcd1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QC762_406940 (rcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsd03019
]
QC762_406940 (rcd1)
Messenger RNA biogenesis [BR:
ppsd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
QC762_406940 (rcd1)
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
87910054
NCBI-ProteinID:
XP_062743825
LinkDB
All DBs
Position
4:complement(2783072..2785018)
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AA seq
355 aa
AA seq
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MMPNPHVYGHHQYPQADSAWMHQQTSHQHHVQAAAQGAVNVAQQQYHNRLAGAHNGVNAL
AQSHAQESSLDASVSEDNRRTLQYIADLLDENTREAALLELSKKREQVPELALILWHSFG
VMTSLLQEIISVYSLLNPSQLTAAASNRVCNALALLQCVASHNETRTLFLSAHIPLFLYP
FLNTTSKSRPFEYLRLTSLGVIGALVKNDSTEVINFLLTTEIIPLCLRIMETGSELSKTV
AIFIVQKILLDDNGLNYICATYERFYAVGTVLSNMVGQLVEQQTARLLKHVVRCFLRLSD
NARAREALRQCLPEPLRDNTFAAVLRDDAATKRCLHQLVVNLQENVVEPSGQLGI
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccaacccgcacgtatatggccaccaccagtatccccaggcggactcggcctgg
atgcaccagcagacatcgcaccagcaccacgtccaggccgctgctcagggtgctgtgaat
gtggcccagcagcaatatcacaaccgcctggctggcgctcacaatggcgtcaatgccctg
gcgcagagccacgcgcaggagagctcgttggatgcgtccgtctcggaggacaatagacgg
acactgcagtacatcgccgatctgcttgatgagaacacgcgtgaggcggccttgttggag
ctcagcaagaagcgggaacaggtacccgagttggcacttatcttgtggcactcgtttggc
gtcatgacttcgctccttcaagagatcatcagcgtgtacagcttgttgaacccatcgcaa
ctcactgcggcggcttccaacagagtgtgcaacgcgctggctctcctccagtgtgttgcg
tcgcacaacgagacacgcacattgttcctaagcgctcatattcctcttttcctgtatcca
ttcctcaacacaacctccaagtctaggccgttcgaatacttgcggctcacgtcgttggga
gtgatcggtgcgctggttaagaatgactcgactgaggtgatcaacttcctgttgaccacc
gagatcattcctctgtgtcttcgcatcatggagacggggtccgagctcagcaagacggtg
gcgattttcattgtccagaagattctgctcgacgacaacggcctcaactatatttgcgcc
acatacgagcgattctatgcggtcgggacagtgttgagcaacatggtgggccagcttgtc
gaacagcaaacggctaggctcctgaagcatgttgtgcgatgcttccttaggttgagcgat
aatgcgagagcccgtgaggcgttgcgtcagtgcctcccagagcctctgcgagacaacact
tttgccgccgtccttcgggatgacgccgcaacaaagcgttgtctgcaccagctcgttgtc
aaccttcaggaaaatgtagtcgaacccagcggccaacttggaatctga
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