Podospora pseudocomata: QC762_407300
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Entry
QC762_407300 CDS
T09797
Symbol
SEC13
Name
(RefSeq) GTPase-activating protein S13
KO
K14004
protein transport protein SEC13
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03013
Nucleocytoplasmic transport
ppsd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
QC762_407300 (SEC13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
QC762_407300 (SEC13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsd03019
]
QC762_407300 (SEC13)
04131 Membrane trafficking [BR:
ppsd04131
]
QC762_407300 (SEC13)
Messenger RNA biogenesis [BR:
ppsd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
QC762_407300 (SEC13)
Membrane trafficking [BR:
ppsd04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
QC762_407300 (SEC13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
QC762_407300 (SEC13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
QC762_407300 (SEC13)
BRITE hierarchy
Motif
Pfam:
WD40
ANAPC4_WD40
Kelch_6
NBCH_WD40
IKI3
Motif
Other DBs
NCBI-GeneID:
87910100
NCBI-ProteinID:
XP_062743762
LinkDB
All DBs
Position
4:complement(2542776..2544191)
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AA seq
304 aa
AA seq
DB search
MTAGAQVISNAGHDDMIHDAVLDYYGRRLATCSSDRTIKIFEIEGESQRLIETLKGHEGA
VWCVSWAHPKYGNILASAGYDGKVLIWREQNGSWQRIFDFALHKASVNIVSWSPHEAGCL
LACASSDGNVSVLEFKDNSWEHSSFHAHGLGVNSVSWAPATTPGSIVSSNPGPGSAGNRR
FVTGGSDNQLKIWAYDPATNSYKQEREPLVGHTDWVRDVAWSPTVLQKSYIASASQDRTV
RIWTSDSASPGQWNFKVLNFDAAVWRVSWSLSGNVLAASGADNKVTLWKENLKGEWECVK
TIEE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgggcgcccaggttatcagcaacgccggtcacgatgacatgatccacgatgca
gtcctggattactacggccggaggttagcgacctgctcgtcggatcgcaccatcaagatc
ttcgagattgagggcgagtcacaacggttgatcgagacactcaaggggcacgagggcgca
gtgtggtgcgtgtcctgggcgcatcccaagtacggcaacatcctcgcgagcgcgggctac
gacggcaaggtgctcatctggcgcgagcaaaacggctcgtggcagcgcatcttcgacttt
gccctccacaaggccagcgtgaacattgtgtcttggtccccccacgaggccggctgcctc
ctcgcatgcgcttcctccgatggcaacgtcagcgttctcgaattcaaggacaacagctgg
gagcacagcagcttccacgcgcacggtctgggtgtcaactcggtttcttgggcgcctgcc
accacacccggcagcatcgtcagcagcaaccccggcccagggtcggccggcaacagacgc
tttgtaactggcggttccgacaaccagctcaagatctgggcgtacgacccggctacgaac
agctataagcaagagagggagcccttggtgggtcataccgattgggtcagggatgtggcg
tggagcccaacggtgcttcagaagagctatattgcctctgcgtcacaggacaggacagtg
cggatctggacgagtgactctgccagccccgggcagtggaatttcaaggtcctgaacttt
gatgctgctgtctggcgcgtgagctggtccctgagcgggaacgttcttgcggccagcggg
gcggataacaaggttaccttgtggaaggagaaccttaagggcgagtgggagtgcgtcaag
accattgaggagtaa
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integrated database retrieval system