KEGG   Podospora pseudocomata: QC762_407300
Entry
QC762_407300      CDS       T09797                                 
Symbol
SEC13
Name
(RefSeq) GTPase-activating protein S13
  KO
K14004  protein transport protein SEC13
Organism
ppsd  Podospora pseudocomata
Pathway
ppsd03013  Nucleocytoplasmic transport
ppsd04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ppsd00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    QC762_407300 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    QC762_407300 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppsd03019]
    QC762_407300 (SEC13)
   04131 Membrane trafficking [BR:ppsd04131]
    QC762_407300 (SEC13)
Messenger RNA biogenesis [BR:ppsd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     QC762_407300 (SEC13)
Membrane trafficking [BR:ppsd04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    QC762_407300 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    QC762_407300 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    QC762_407300 (SEC13)
Motif
Pfam: WD40 ANAPC4_WD40 Kelch_6 NBCH_WD40 IKI3
Other DBs
NCBI-GeneID: 87910100
NCBI-ProteinID: XP_062743762
LinkDB
Position
4:complement(2542776..2544191)
AA seq 304 aa
MTAGAQVISNAGHDDMIHDAVLDYYGRRLATCSSDRTIKIFEIEGESQRLIETLKGHEGA
VWCVSWAHPKYGNILASAGYDGKVLIWREQNGSWQRIFDFALHKASVNIVSWSPHEAGCL
LACASSDGNVSVLEFKDNSWEHSSFHAHGLGVNSVSWAPATTPGSIVSSNPGPGSAGNRR
FVTGGSDNQLKIWAYDPATNSYKQEREPLVGHTDWVRDVAWSPTVLQKSYIASASQDRTV
RIWTSDSASPGQWNFKVLNFDAAVWRVSWSLSGNVLAASGADNKVTLWKENLKGEWECVK
TIEE
NT seq 915 nt   +upstreamnt  +downstreamnt
atgacagcgggcgcccaggttatcagcaacgccggtcacgatgacatgatccacgatgca
gtcctggattactacggccggaggttagcgacctgctcgtcggatcgcaccatcaagatc
ttcgagattgagggcgagtcacaacggttgatcgagacactcaaggggcacgagggcgca
gtgtggtgcgtgtcctgggcgcatcccaagtacggcaacatcctcgcgagcgcgggctac
gacggcaaggtgctcatctggcgcgagcaaaacggctcgtggcagcgcatcttcgacttt
gccctccacaaggccagcgtgaacattgtgtcttggtccccccacgaggccggctgcctc
ctcgcatgcgcttcctccgatggcaacgtcagcgttctcgaattcaaggacaacagctgg
gagcacagcagcttccacgcgcacggtctgggtgtcaactcggtttcttgggcgcctgcc
accacacccggcagcatcgtcagcagcaaccccggcccagggtcggccggcaacagacgc
tttgtaactggcggttccgacaaccagctcaagatctgggcgtacgacccggctacgaac
agctataagcaagagagggagcccttggtgggtcataccgattgggtcagggatgtggcg
tggagcccaacggtgcttcagaagagctatattgcctctgcgtcacaggacaggacagtg
cggatctggacgagtgactctgccagccccgggcagtggaatttcaaggtcctgaacttt
gatgctgctgtctggcgcgtgagctggtccctgagcgggaacgttcttgcggccagcggg
gcggataacaaggttaccttgtggaaggagaaccttaagggcgagtgggagtgcgtcaag
accattgaggagtaa

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