Podospora pseudocomata: QC762_500130
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Entry
QC762_500130 CDS
T09797
Symbol
RIM20
Name
(RefSeq) pH-response regulator protein palA/rim20
KO
K12200
programmed cell death 6-interacting protein
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03250
Viral life cycle - HIV-1
ppsd03272
Virion - Hepatitis viruses
ppsd04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
QC762_500130 (RIM20)
03272 Virion - Hepatitis viruses
QC762_500130 (RIM20)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
QC762_500130 (RIM20)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppsd04131
]
QC762_500130 (RIM20)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppsd04147
]
QC762_500130 (RIM20)
Membrane trafficking [BR:
ppsd04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
QC762_500130 (RIM20)
Exosome [BR:
ppsd04147
]
Exosomal proteins
Proteins found in most exosomes
QC762_500130 (RIM20)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
zf-C4H2
K-box
Motif
Other DBs
NCBI-GeneID:
87910362
NCBI-ProteinID:
XP_062741757
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Position
5:1066923..1070545
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AA seq
867 aa
AA seq
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MTTNNILSLPFRKSVQLSLSSSLRQYISKKYDQHPDMFRHDLEVIDSLRRDAVNTREPHS
TGIRKLQTYAAQLVWMSGKFPIDIGVDFTWYPALGYHTEHPLVQNNLQYELLNILYNLAA
LYSQLAISSNRSDTKGLKTAASFFSQAAGVLSHMKKEVLPELRMANPPDDMDEATLEALT
QLFLAQSQECFWQKAVMDQYKDASIAKLAARVSDLYNLAVEAAMQSEAISSAWIHHMSAK
HHHFAAAAQYRAARDCLEKKRYGEEVARLKDAVNCVTEGLKECKGGYISKAVVDDLHGLK
KRVEEDLKRAEKDNDIIYLQIVPPKPELKILERANMAVASVPSQVAKPYEYFGDHAEFGP
ALFTKLVPFSVHVAVSIYEERRDRLVNNNIIAELETMTDRLHEILSSLNLPGSLQALEKP
LGLPSTLVQHAEEIRQADALNKLQRGFADVEKLCASDKAVFEEGKALLAAEEEEDHALRL
KYGTQRWARPESRADPSHDGGAKLWNQAGDIDGYFASSTSSDAVVREKFAAVKETLAILA
GPDRGMMDYIPNSRRTEIPELLKPAIGRLRGVYNDVLRLESRRRKRIESLRARSRADDIK
GDIMAEAARLERTYPNTPIVPAHFEDFFDKRLDSLYESELEALEKEQADQEKIMSEIQRA
NRDFESQKKVIGESGNREREKALQRLDNAYYKYKEIVSNIEVGRKFYNDLSRIVEQFRNQ
ARSWVNERRQEARMLEDELSMPPLASLSMRSSQPQSPPPQAYQSPAPSSYYMQSPQRQPV
RAPAVHSPHVEAQIQSWADNVPQQQPKPMPPIASMQGAWMPNMGIKFSEAGAGGSGGSPG
QGQQQGGGSSSGPVRGTWDPNSGIRFG
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccaacaacatcctgtcgctccccttccgaaagtccgtacaactctcgctctcc
tcctcgcttcgacagtacatctccaagaagtatgaccaacacccggacatgttccgtcat
gacctcgaggtcattgactccctccgccgcgatgccgtcaatacgcgcgaaccccactcg
accggtatcaggaaactccaaacttatgccgcccaactggtttggatgagcgggaaattc
ccaattgatattggcgtcgactttacatggtacccggccctgggctaccacaccgagcac
cccctcgtacagaacaatctccaatacgagctcctgaacattctctacaacctcgctgct
ctgtattcacaactggcgatatcgtcgaaccgaagtgacaccaaggggctgaagactgct
gcgagcttcttctctcaggccgccggcgtgctatcccatatgaagaaggaagtcctcccc
gaattgcgcatggccaacccaccagacgatatggacgaggccacgttggaagcattgact
cagctcttcctcgcccaaagtcaagagtgtttctggcagaaggccgttatggatcaatac
aaggatgcttccatcgccaagctggctgctcgcgtgtctgacctctacaacttggcagtg
gaggcagccatgcagagtgaagccatcagctctgcctggatccaccacatgagcgccaag
caccaccactttgccgccgctgcccagtaccgcgctgctcgtgattgcttggagaagaaa
cgatacggcgaggaggtagctcggctgaaagacgctgtcaactgcgtcactgaaggtctt
aaggagtgcaaaggcggctacattagcaaggctgtcgttgacgatctccatggcctcaag
aagcgcgttgaagaggacttgaaaagggccgaaaaggacaacgacatcatctacctgcaa
atcgtgccgccaaaacctgagctcaagatcctcgagcgtgctaacatggcggtagcgagt
gttccatcgcaggtcgcaaagccttacgaatattttggggatcatgccgaatttggacct
gccctgttcaccaaacttgtgccgttctcggttcatgtcgctgtgtccatctatgaggag
cgaagagatcgccttgtcaacaacaacatcatcgccgagttggaaaccatgacagacagg
ctccacgagattctttcgagtttaaacttgcctgggtcattgcaggctcttgagaagccg
cttggtttacccagtacccttgtacagcacgccgaggagattcgacaagccgatgcgctg
aacaaattgcagcgcggtttcgccgatgtcgagaagctttgcgccagtgacaaggctgtg
tttgaagaaggaaaggctcttctggccgccgaggaagaagaagaccacgccttgaggctc
aaatatggcacacaaaggtgggcaaggcccgagtcgagggctgaccccagtcatgacggt
ggggccaagctgtggaaccaagcaggtgacatcgatggatactttgcttcgagtacgtct
agtgatgctgtggttcgagagaagtttgctgcggtcaaggaaaccctcgccatcctcgcc
ggcccagaccgtggtatgatggactacatccccaacagtcgcagaaccgagatcccagaa
ctcctcaaaccagccataggacggctgcggggagtatacaacgacgtattacggctggag
tcaaggaggaggaagcggatcgagtctcttcgtgccaggagccgggccgatgacattaag
ggcgacatcatggctgaggcggcgcgtcttgaaaggacataccccaacactcccatcgtg
ccagctcactttgaggacttctttgacaagcgcctggacagtctttatgagtctgaactt
gaggctctcgagaaggaacaggccgatcaggagaaaatcatgagcgagatccagcgggcc
aaccgtgactttgagtcgcagaagaaagttattggcgagagcggcaatcgggagcgggaa
aaggccctgcagagattggataatgcttactacaagtacaaggagattgttagtaatatc
gaggttgggcggaagttctacaatgacctcagtcgtattgttgagcaattccgcaaccag
gcgcgcagctgggtgaacgaaaggagacaggaagcgaggatgttggaggatgaactctcg
atgccaccgctagcatcgcttagtatgcgatccagccagccccagtcgcctccgccgcaa
gcgtaccagtccccggctccctcgtcgtactacatgcagtcgccgcaacggcagcctgtt
agggcgcctgctgttcacagtcctcatgttgaggcgcagattcagagctgggcggataat
gtgccacagcagcagcctaagccgatgccacctattgcttcgatgcaaggggcttggatg
ccgaatatgggcatcaagttctctgaggcaggtgcaggtggctcggggggtagtccggga
cagggtcagcagcagggtggtgggagctcttcggggcctgtgagggggacatgggatcct
aacagtgggattaggttcggttga
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