Podospora pseudocomata: QC762_501860
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Entry
QC762_501860 CDS
T09797
Name
(RefSeq) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd00040
Pentose and glucuronate interconversions
ppsd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
QC762_501860
Enzymes [BR:
ppsd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
QC762_501860
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
87910514
NCBI-ProteinID:
XP_062741560
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Position
5:415674..417882
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AA seq
331 aa
AA seq
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MKLLGLSVFLALAQATPTPTLPEENTVRLEKRASISEAATLGFASLNGGTTGGAGGTVTT
VSTLPEFTAAVGEKNTAPTIVVIRGVITGNEKVRIGSNKSIIGLPGSGLRGIGLHFRRQN
NLIVRNIVSSFVVASTAEDALKIEGSTNVWVDHCEFHSTLNSDKDFYDGAVDSSHGSDFI
TVSHTYFHDHWKTSLVGHSDNNGSQDKGKLRITYANNYWKNVNSRAPLLRFGTAHIYNSF
YENMSSAVNTRMGAQALVQSNVFRNVTAAVVSQDSKEVGFAVLEGNELGGGLANAPAGNL
GSSSIPYSFSLLGAGAVPSRVPAEAGAILKF
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcctcggtctcagtgtatttctcgctctggcacaggccacacctacccctact
ctccctgaggagaatacggtgaggctcgagaaaagagccagtatctcagaggcagcgact
ctgggatttgcctctttgaacggaggaacgactggaggtgcaggtggtacagtaacgact
gtgtccacgctccctgagttcaccgccgctgttggcgagaagaatacggccccaaccatc
gtggtaattcgtggagtcatcacgggcaacgagaaggtccgcattgggagcaacaagagt
atcattggcctgcccggttctggcctgaggggcattggcttgcacttccgcagacaaaac
aacctcatcgtgcgcaacatcgtctcctcctttgttgtggcgagcaccgctgaggatgca
ctcaagatcgagggaagcaccaacgtctgggtcgaccattgcgaattccactccaccttg
aacagcgacaaggacttctatgacggcgctgttgactcgtctcacggctccgacttcatc
accgtctcccacacctacttccacgaccactggaagacctccctcgtcggccatagcgac
aataacggctcccaggataaaggtaagctgcgcattacgtacgccaacaactattggaag
aacgtgaattcacgtgcaccgcttctccgcttcggaacggcccacatctacaactctttc
tacgagaacatgagctcggcggtcaatacccgaatgggcgctcaggcgctagttcagagc
aacgtcttccgtaatgttacggctgccgtcgtcagccaggattccaaggaggtcgggttt
gcggttctggagggcaatgagcttggtggcggccttgccaatgccccggctgggaacttg
gggtcgagcagcattccctattctttttctctgctgggtgcgggtgcggtgccgtcgagg
gtgcctgctgaggctggtgctattctcaagttctga
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