Podospora pseudocomata: QC762_502070
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Entry
QC762_502070 CDS
T09797
Symbol
VPS41
Name
(RefSeq) Vacuolar protein sorting-associated protein 41
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd04138
Autophagy - yeast
ppsd04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
QC762_502070 (VPS41)
04148 Efferocytosis
QC762_502070 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppsd04131
]
QC762_502070 (VPS41)
Membrane trafficking [BR:
ppsd04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
QC762_502070 (VPS41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
Vps39_1
zf_RING_Vps8
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
87910538
NCBI-ProteinID:
XP_062741535
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All DBs
Position
5:344822..349290
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AA seq
1309 aa
AA seq
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MTGSSPQPGDNDPHHDKSPTESSSAGVALKHPPASDATTTGPMKELRVNTGAGATSDDET
DDTLEQSSDEDGEREEEGEEEAEEGEEESEDEDEEPKLKYARLTQHLGPLYRNGDATSTF
LVAGDKQIIGTHNGNIHVIQLPVFQPLRVYHAHSASVTAVSISPYPPPLSTLRPDATPKA
TPSSPRRPGSSIGEGHDVPTPPPRRATQLQNTVPNTPSNNIYIATSSMDGNVCVQSLVDV
KDVSLRNFARPIQAVALSPDYKHDKTYLSGGLSGQLILTTGAPLGRSTATTTGAAAQAAG
WLGGMVGASTGKDTVLHSGEGTINTIKWSLSGKYVVWLNEHGIKIMRTKLHLESADADDA
WKRIGHIDRPQTAEWETMASVWKGRAEWIDEQAVEPDEPEKESHEVLLSPAAERLKQQQV
KHSKTIERLLVGWGGTIWIIHVHPGGVGVGKHAGEKSAGRAEIVKLLRMDCIISGISLYT
QNLILVLAYCLPDDDDANDQDDGTAARGHKHTLSSGSEPSGGIRRKQNNQPPELRLIDLT
SQAEVDKDGLTLSRFERLSSNDYHLGVLPAQTVAAAASSRGALETLAGLGTEMLNAALNP
ISLFSSGASIRSKDSNEGTSPVKIAAASALLRSKGGSVHPNLTKPGVKIFIHSPYDCILA
TRRDLGDHLSWLLERQQYQQAWELVNEHPEIMSTAVDTSPLSPDHTQTTDDFYDETASLA
EGMQSMYSAAEKEKRRIGELWLQELVEAGDWVRAGQTCGKVLGTPDRWEKWVWTFAGANK
FDEIVNHIPTERTRPPIPGTIYEVVLGHYLETSKPQFRELLERWSPDLFEITTITTALEN
QLNYREVREDSVEDGEVGRDWRIVMESLAKLHEANGRNREALKCYIKLQDADNAMRLIKD
GHLADAVADDIPSFLTLRVPQGQAKMSNDELEQATHEAITLLVDEAQHGLVKPDVVVEQL
QEKKLDLYTFFYLRGLWRGQGIHEHSGESRARLVTDSQSLVDNFADLAVHLFAKYDQGLL
MSFLKTSTAYAFEEAVKECDRYDYIPELVYLYSKTGQMKRALTLIIERLGDVSRAIAFAK
EQDDPDLWEDLLEYSMDKPRFIRGLLEEVGTAINPITLVRRIPEGLEIDGLREGLKHIMK
EHDIQHSISSGVAKVLRSEVAAAQNLLRSGQRKGVKFEVVVKGGDHVDVKAKDVPTVVGE
KHEVVDDGVDNEEVPKPPGKKWAPGHCAGCCEAFTEWEMETLVGFACGHVYHLSHLLEKM
HPGERVDQSLVSAVGESVSHRIGAKVTHAMLLRDKIAGGCPVCKEAEET
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgacaggaagctcgccacagcccggcgacaacgatccccaccatgacaagagcccgact
gagtccagcagcgctggtgtagcgctcaagcacccaccagccagcgacgcgacaacaaca
ggcccaatgaaggagctcagggttaacacaggcgctggcgcaacctctgacgatgaaacc
gatgacacattagagcagtctagtgatgaggatggtgaaagggaggaagagggcgaggaa
gaggcagaagagggcgaggaagaaagcgaggatgaagatgaggagccaaagctcaagtac
gcgcgattgacccaacacctcgggcccctttaccgcaatggagatgcgacaagcaccttt
ctagttgctggagacaaacagatcataggaacacataatggaaacatccatgttattcaa
ctccctgttttccaaccattacgagtctatcatgcccactcagcctctgttacagccgtt
tccatctccccataccctccaccactgtcgacgctcagacccgatgccaccccgaaagct
actccaagtagccctcgaagaccgggttcatctatcggcgaaggccatgatgtcccaaca
ccaccaccgagaagggctacccaactccaaaacacagtgccgaataccccgtccaacaat
atttacattgctacctcgtcgatggatggaaatgtctgtgtacagtctctggtcgatgtc
aaggatgtgtcgctgcgcaactttgctcgccctatccaagccgtcgctctgtctccagac
tacaagcacgacaagacatatctttctggcgggttgtcgggtcagctaattctgacgacg
ggtgcgccgctcggtcgaagcactgccacaacaacgggggcagctgcgcaggcggcaggt
tggcttggtggcatggtcggcgccagcacaggaaaagataccgttttgcactctggcgag
ggaactatcaacaccatcaagtggtctttgtcgggaaaatacgtcgtctggttgaacgaa
catggcatcaagatcatgcgtacaaaacttcatctggagagcgccgatgcagacgatgcc
tggaagcgcatcggccacattgatcggcctcaaacggcagagtgggagactatggccagc
gtgtggaagggaagggctgagtggatcgacgagcaagccgtcgagcctgatgagcctgag
aaggaatctcacgaagtcctcctttcgccagctgcggaaagactgaaacaacagcaggtc
aagcacagcaagacgatagagcgtctcttggttggctggggtgggaccatctggatcata
catgtccaccccgggggcgtcggcgttggaaagcatgccggggagaagtccgctggccgg
gcagagattgtaaagttacttcgtatggattgcattatttctggcatttcgttatatacc
caaaacttgatattagtcctcgcctattgtttgccggacgacgacgacgccaacgaccaa
gacgacggtaccgcggctcgcggccacaagcacacattatccagtggtagcgagccatca
ggcggaattcgtcgcaagcaaaacaaccagcctcccgaactgcggctgatcgatctcact
tctcaggcagaggtcgacaaagatggcctgacgctcagccggttcgaaaggctttcgtcc
aatgattaccaccttggtgtcttgccagctcaaacagtggctgctgctgcctctagtagg
ggtgccctggagacgttggctgggctgggcactgagatgctcaacgcggctctcaaccct
atctctctctttagctcaggtgccagtatcagaagcaaggacagcaacgagggcacatcg
cctgtcaagattgctgccgcgtcggctctcttacgatcaaagggtggatctgtgcatcca
aatctcaccaagcccggagtcaagatctttatacatagtccgtatgactgcatcctcgcg
acaaggagagatttgggggatcatctgtcgtggttgttggagcgacagcagtaccagcaa
gcatgggagcttgtcaacgagcaccccgagatcatgtcgacggctgtcgacacgagccca
ttatcgccggaccatactcagacaaccgacgacttttacgatgagaccgcttcccttgcc
gagggaatgcaatcgatgtactcggcggcagaaaaggaaaagaggcggatcggcgaactg
tggctgcaagagctggttgaggctggcgactgggtacgagctggacagacctgtggaaag
gttttgggaactccggaccgctgggagaagtgggtgtggacatttgctggggcgaacaag
tttgacgagattgtcaatcacatccctaccgagcggacacggcccccaatcccgggaacc
atctacgaggttgtgcttgggcattacctcgagacgagcaaaccccagttccgcgagctt
ttggagagatggtctcctgacttgttcgagattaccaccatcacgacagccttggagaac
cagctcaactaccgagaagtgagggaagacagcgtggaggatggcgaggttgggcgcgac
tggcgcatcgtgatggagagtcttgccaagcttcatgaagccaacggcaggaatagggag
gctctcaaatgctacatcaagctgcaggatgcggataacgcgatgaggttgatcaaggat
gggcatttggctgatgccgtggcggatgacatccctagctttctcactcttcgtgttcct
caaggtcaggccaagatgtcgaatgatgagctggaacaggcgactcatgaggcgattacc
ctgctggtggacgaggcacagcatggactggtcaagccggatgttgtggtggagcagctc
caggagaagaaattggatctgtacacgttcttttatcttcggggtttatggcgggggcag
gggattcacgaacatagcggggagtcgagggcgaggcttgtgaccgacagtcagtctctg
gtggacaattttgctgatttggcggtgcatttgtttgcaaagtatgaccagggactgttg
atgagctttctcaagacttcgactgcgtatgcgtttgaggaggccgtcaaagaatgcgat
cgatacgattacatccccgagctggtctacctgtactccaagactgggcagatgaagcgc
gccctgacgctcattattgaacggctgggcgatgtcagccgcgcgattgcttttgccaag
gaacaagacgatcctgatctttgggaggatctgctcgagtatagtatggacaagccccgg
ttcattagggggttgcttgaggaggtcgggacggcgattaatcccatcactcttgtcaga
cggattccagaggggctggagattgatggtttgagggaggggctgaagcatatcatgaag
gagcatgatatccaacacagtatcagctcgggcgtggcaaaggtgttgaggagtgaggtg
gcggcggcgcagaatttgttgaggagtgggcagaggaagggggtgaagtttgaggttgtg
gttaaggggggcgatcatgttgatgtcaaggcgaaggatgtgcctactgttgttggggag
aagcatgaggttgttgatgatggggttgataatgaggaggttcctaagccgccggggaag
aagtgggcgccggggcattgtgcggggtgttgtgaggcgtttacggagtgggagatggag
acgttggttgggtttgcctgtggacatgtgtatcatttgtcgcatttgctggagaagatg
cacccgggggagagggtggatcagagcttggtgagtgcggttggggagagtgtgtcgcat
cggataggggccaaggtgacgcatgcgatgttgttgagggacaagattgcgggcgggtgt
cctgtttgcaaggaggcggaggagacgtga
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integrated database retrieval system
