Podospora pseudocomata: QC762_503950
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Entry
QC762_503950 CDS
T09797
Name
(RefSeq) hypothetical protein
Organism
ppsd
Podospora pseudocomata
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
HET
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_33
AAA_22
nSTAND3
AAA_17
RNA_helicase
AAA_14
AAA_24
AAA_18
TIP49
IstB_IS21
AAA_28
ABC_tran
Motif
Other DBs
NCBI-GeneID:
87910721
NCBI-ProteinID:
XP_062741939
LinkDB
All DBs
Position
5:1614956..1620139
Genome browser
AA seq
1671 aa
AA seq
DB search
MTWFLQYSVRPETILTILAVAISVDQFVTIVATTGVVVLSLCFWLHIIGLSSDFFPTLGQ
HARLQPDSFSQEHLSQHQIEEEDLQPKAVGEEIKSREELSSTPVGGSSVSCSDSRSQSES
EALEEQAVEQGYLGKVPAEYNLPEDDVKGSLEVPFWFLNYNLKTTSELANHMPKIIIKED
APDTAYDEDAVFEIKSAVYNNLWSVLSNPSQTWESANEENVPFFRKATLLLTAINTMYGA
RGHRAFFEAVVEQFATDIGADLIALDIEDVLDLGEYWLNGPESRGCVREGKRDRPLLFAH
TLLDVPDQRTFRHGTGSATPERRPLIIHIPDVHHFDIPDDNDLQGSPRWFDFADIKEILD
VIQLAIINQAGVNGATLLVLSSRYYTTSHRDTDIPLVHALLEAEEDITLVPLKTPSQVKL
LEEGLPNCDRHLRINIRSFQRQIRATIGDFTSPLLQPHTAWEFINDCETSTRFCLGHRQH
GEIISVGKKVALQVGRHGSVTADHIRQSLIAVASHGEMLKDWDIESSVDDVQSRWAQFSP
HIRQKLEQAENGNNDAEKQLLDLVVDPGSVMHGWSNIQLDLDTKDAIAQLIHQATGTISS
NLRSGILTNAKVGGALLYGPPGTGKTHLARVLAHEYELVMLSVSSADIESSRVGETEKTI
QNLFSLARKLHPSIIFIDEADSLLKRREPHDHTWERARLNQFLAEMDGLKQDMNSPFVIL
ATNLPQALDDAVLRRVPARLFMGLPRARARREILAICLREDVVADDVNVDDLVRRTKGYT
GSDLHTLCVQAALISAAESQASMSVNNMTRLSSIQRVHFEKALRRSAPTSTGHALAAIRE
FAKASDPQALAQFTAPDNDEVEQASTSAEPSLPRQKTGITTGTLTPPDQSIDNVGDSGSV
TEGEATSDFASPEFGVPEAPTSHKTTSALGPLYTPLKSNSRQIRVLSITPQSPKTEDSWI
ECRLETVDLDDMEVWYHELRTILQANDGEFPFDVTRTPPAWILATAANELAKEQPKDTEM
HWAYVLEKFNSIPELKTLKSDVPFERLTRWTEFAPRYEWGDYIAMSYTWGPPEPSHTILV
NNHEVQVGGNLYQMLLRLRKSVEVKQSHLKVWIDALCINQNDDKEKETEVQKMDVIYSMA
LAVRGWIGAPSSATPGSPFDTAYTLVRQWFSQHQGIPKSYISDPTLYPQSLLRSLRTVAF
ELIRLPYWSRTWITQEIALANSVCFWYGDDYLFVPGEIKRALEPFVDFSSALNQPSDLHF
MWDDGELDSSSDLPSIQEQRMLSQHVHRIFVKFDLRELPRVNNTGLLITILTLAQASAAT
DSRDKVYGTLALLPLSIRDSVKPSYAEFYAALDAYADFAKACILGLGDLSIWTYLTRLQP
RPGGSSLPSWAIDLSSEADDALVQERTTPPSRPGSRFNANAGKQQCPAFSHDGRIMYCEG
LIIDSIDTLTMSPSRAREITLQDSYFNPLSSVTNPPAAPSNMPNEDARTALARVLHAEPE
YDISNPSCLLNLAWGLKEDRPPDGLNWQRLEANIKDASELAHAHMSLLWWRTLLHANLDF
MIKGCPLHSYFSSGAAQEFQPHDYTYQDLSQTSYRRLCMTSNGQVGTVPGLAQAGDKIVV
LFACQKPVVVRPKGKHYEFIGTCFVDGLMKGEAVADMESGGKLNPEMLSFC
NT seq
5016 nt
NT seq
+upstream
nt +downstream
nt
atgacttggtttttacagtactcagttcggcctgaaacgatactgacgatactcgccgtg
gccatctccgtggaccaatttgtcaccatcgtagcgactactggagtggtcgttctatct
ttgtgtttctggctacatataattgggctctcgtcggacttcttcccgaccttgggccag
catgcgcggcttcaacctgactctttctcacaggagcacctctctcagcaccaaatcgag
gaagaggacttacagccaaaggcggtgggcgaagaaataaaatcaagggaagagttgtct
tcgacaccagtcgggggaagctcagtgagttgttctgactcaagaagtcagtcagagagt
gaagctctggaggagcaggcagtggagcaaggctaccttggaaaagtcccagctgagtac
aatctaccagaggacgatgttaaaggatcattggaagtgcccttctggtttttgaactac
aacctgaagacaacgagtgagcttgccaaccacatgcccaaaataatcatcaaggaagac
gcgccagatacagcatacgatgaggatgccgtttttgaaatcaaatcagctgtgtacaac
aacctttggtctgtattgtcaaacccaagccagacgtgggagtcagcaaacgaagagaat
gtgcccttcttcaggaaggcgacccttctcctgaccgcgattaacaccatgtacggggct
cgaggtcaccgcgccttctttgaagctgtcgtcgaacagtttgccactgacattggggct
gatcttatcgcactggacattgaggatgttttggacttgggtgagtactggttaaatgga
ccagaaagtcggggctgtgtacgggaaggcaaaagggacaggccgctgttgttcgcacat
acattgctcgacgttccagaccagaggacattcaggcacggtaccggtagcgccacgcct
gagcgtcgaccattgatcatacacattccagatgttcaccacttcgacatacccgacgat
aatgacctccaaggcagcccaagatggttcgacttcgccgacatcaaagaaatactcgac
gtgatacagctagccatcatcaatcaagcgggagtgaacggtgccaccttgcttgtgctt
tcgagtcgctattacaccacatcccacagagacactgacattcccctcgtacacgcgctt
cttgaggccgaagaggacataacactggtgccactgaaaactccaagccaggtcaaactg
cttgaagaaggacttcccaactgcgatcgtcatcttcgcataaacatccgttcattccag
cgacagataagggccactatcggggactttacttcgccgctattgcagcctcacacggca
tgggagttcatcaatgactgcgagacatcgacgaggttttgcctcgggcaccggcaacat
ggggaaatcatatcagttgggaagaaagttgcgcttcaagtcggaagacatggaagcgtc
actgccgatcacattcgacaatcacttattgcagtggcctcgcacggagaaatgctaaaa
gattgggacattgagagtagtgttgatgacgtccagtcgcgctgggctcaattttcgcca
catattagacaaaagctcgagcaagctgagaacgggaataatgacgctgagaaacaatta
ttggatcttgttgttgatcccgggtcggtcatgcacggatggtcgaatatccagctcgat
ttggacacgaaggatgccatcgcccagttgattcaccaggcaacagggactatttcgtcc
aatctccggtccggaatcctcacaaatgccaaagtcggcggtgctctactctacggcccc
ccagggacaggcaagactcatctagcaagagtgctggcccacgagtacgagctggtcatg
ctttcggtatcttcggccgacattgagtcgagtcgtgtgggtgaaacggaaaagaccatc
caaaacctcttcagtctagctcgcaaactccatccaagcatcattttcatcgacgaagcg
gactccctcctaaagcgcagggaaccacacgaccacacgtgggagcgtgctcggctgaac
caattccttgccgaaatggatggtctcaaacaggacatgaactcgccgtttgttatcctg
gccaccaaccttccacaagcacttgatgacgccgttctccgtcgcgttcctgcaagattg
ttcatgggcttaccgcgggcgcgggcgaggcgagaaattcttgcaatctgcctccgcgaa
gacgttgttgcagacgacgtgaacgttgatgaccttgtacgacgcaccaagggttataca
ggctccgacttgcatactctgtgtgtccaggctgctctgatctcagcggccgaatcccaa
gcgtcgatgtctgttaacaacatgaccaggcttagtagcatacagcgagttcactttgaa
aaggcactgaggcgatcagcacctacgagcactggacacgcactggctgcgatccgggaa
tttgcaaaagcaagtgacccacaagcattggctcagtttacagcgcctgacaatgatgag
gtagaacaagcatcgacatcggcagagccttcgttgccgcgccagaagacgggaatcacg
accggtacattgacacctccggatcaaagtattgacaacgtaggagattcggggtctgtg
acagagggtgaagccacttctgactttgcatcgcctgagttcggagtcccagaagctcca
acatcacataaaacaacctctgccttggggccgctttacacacccctgaaaagcaacagc
cgacaaatcagagtgctatccatcacgccacagtcacccaaaactgaggacagttggata
gagtgcaggcttgagacggtcgaccttgatgacatggaggtgtggtaccacgagctgcgg
accatactccaagcgaacgatggcgagttcccatttgatgtgaccagaacacctccggca
tggattctagcgacagctgcaaacgagctggccaaggaacaaccaaaagatactgagatg
cactgggcatatgttttggaaaagttcaactcgatccctgagctgaagacgttgaaatca
gacgtaccattcgaaaggttgacaaggtggacagagttcgctccgagatatgaatggggg
gactacatagctatgagttatacctggggacctcccgaaccttctcacaccatcttggtg
aataatcacgaggtacaagttggtggcaacctttaccagatgcttttgaggctcaggaag
tcagtagaggtcaaacagtcacatctcaaggtctggattgatgccctctgcatcaaccaa
aatgacgacaaagaaaaggagaccgaggtgcaaaagatggatgtgatatacagcatggct
ctggcagttcgagggtggataggtgccccgtcctcggcaacaccagggtccccttttgac
accgcttacacattggtgcgacagtggttcagtcagcatcagggaatccccaagtcttac
atttccgaccccacactataccctcagtcactacttcggtcgttgcgaactgtggccttt
gagctcatcagactgccgtactggagtcgcacttggatcacacaggagattgcgctcgct
aattctgtttgtttttggtacggtgatgactacctctttgtacccggagagataaagcga
gcgctcgaaccgtttgtcgactttagctcggcactcaatcagccatcagacttgcacttt
atgtgggatgacggtgagcttgactccagctctgatctcccctcgatccaggaacaacgg
atgttgtctcagcacgttcatcgaatctttgtcaagtttgaccttcgggagctccccagg
gttaataacaccggacttctcatcacgattttgactttggcccaagcatccgccgccacc
gattcgcgcgacaaagtctatggaacactggccctgctccccctctccatcagagacagt
gtcaaacccagctatgctgaattttatgcggcactcgatgcttacgcagactttgctaaa
gcctgtatcctcggcctgggcgatctatcaatatggacctacctaacccggttacagccc
cgtccagggggtagctctctaccgagctgggccatcgatctcagtagtgaggcggacgat
gctttagttcaagaacgtacgaccccaccttcacgtcctggttcccgcttcaacgccaac
gcgggaaaacaacagtgtcctgccttttctcacgacggacgcatcatgtattgcgaggga
ctgatcatcgactccattgacactttgacgatgtcgccctcgcgcgcaagggaaatcaca
ttacaggattcgtatttcaacccgttgtcttcagtgaccaacccccccgctgccccgtcg
aacatgcccaacgaagacgccaggacggctttagcacgcgtgctgcacgcagaacccgag
tatgatatatccaatccaagctgtctcctcaatctggcctggggtctaaaggaagatcgt
ccgccagacgggctcaactggcaaagactggaagccaacatcaaggacgcttctgaacta
gctcacgcccacatgtccttgttgtggtggcgcacccttctccacgccaacctcgacttt
atgatcaaagggtgcccactgcacagctacttttcttcaggtgcggcacaagagttccaa
ccacacgactacacgtaccaggatctatctcagacatcttatcgaagactttgcatgact
tcgaatggtcaggttgggacggtgccaggtctggcccaagccggcgacaagattgtcgtt
ctctttgcttgccaaaagccggtggtggttcgccccaaggggaagcattacgagttcatc
ggcacctgttttgtggacgggctcatgaagggggaggccgtggctgatatggaaagcggg
ggcaagctcaatcctgagatgctttctttttgttag
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integrated database retrieval system