Podospora pseudocomata: QC762_505760
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Entry
QC762_505760 CDS
T09797
Symbol
smc6
Name
(RefSeq) Structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
ppsd
Podospora pseudocomata
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
QC762_505760 (smc6)
DNA repair and recombination proteins [BR:
ppsd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
QC762_505760 (smc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
SAM_KIDINS220
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
87910906
NCBI-ProteinID:
XP_062742149
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All DBs
Position
5:2188395..2193156
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AA seq
1166 aa
AA seq
DB search
MPSRTINNLGAESSRKRHHRGEDDESEEPVRPCSHLNGESRKRARLSDVRDETRANNPDD
EAEYQGAASPDTPPRTQYELMRDNGFEHLRTEAADDQKATQRLRMRPNRLGENVVAENGI
LEQVICINFMCHTRLNCELGPLLNFVVGENGSGKSAVLTAITLCLGGKASSTNRGGSLKS
FVKEGEDKAILTVKIKNQGPDAYQHDIYGDSITVERWFNKTGGSGFNLKTATGSIHSKKK
EEVDQIVEYYALQVDNPLNVLSQDNARQFLNASSKAQKYKFFIEGVQLQQLDNDYKLTAE
YVSQIDTKIPDQEQKIELLKVQRANAERLLETLEGERSLRDKINTMRLKLAWSRVDTCEK
RLAQKEANLAEISTKLISAEEKFGLKSRALEQADQEVETTKAKLERAKEEEPELQAKVEE
AKAHKEAMVADLMKVQAEEREAHQNWKAMTDQVKDFERKIAQEERSLQEAHGGLQTLKMK
ERDEARARVQELEQKIDDNKQLVPRIKSQMSDSARALNPIKERVTKKQEEIHNLKKEIEK
TQAQIGVPLAAYHKNMPRLLKAIDGDKRFQQKPIGPLGTVVHLHKPEWGAILESYFGNNL
NGFVVFSKADMNVLADLMRRCDIDSNRNPIFVGQRNALNLAGKEPDADFDTILRVLKIDN
QAVRDTLVINHAIEQVLLIHKRTTAQSVMMDGMAPPRNVKRCITFHDSKNEGLSIEMKPS
GISTSPVRIGTQPKRLKTESASQMAFLKESLSKLESELQALRVEYKRVQDENSHHKTALA
KAEKEGAVLAQQLRETELELAEIEVALDEWDGSDARLQSLREQLAQALEQKAHHGQQVTG
LIVAKDQKNVLAEEAYKALKAQKLQLKDCEASVNKAEEKAKSAEAHRHIVLREKLDSEDA
YKQLKAEQKEAEESIGREKDRIAEREAEAIQVCPERVHLLDGETEKSVNTQYFALRARYD
KMTSRRQLNEQEVIEQAEKVRKKYDEAVNGLISMVESSERLKHSLSLRLDKWRKFQRYIS
AQSRVNFIYLLSERGYRGRLLLDHKRRLLDVHVEPDHTEKRASGRSTKTLSGGEKSFSSI
CMLLAIWEAMGSPLRCLDEFDVFMDNVNRAVSQNMLVAAARRSVNRQYIFITPNAIDPKI
IAEKDVKLIRLVDPRQQRLTSMQTIS
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgaggacaatcaataacctcggcgcagagtcctcgcggaagcgacaccaccgc
ggcgaagatgacgagtcagaagagcctgtacggccttgttcgcatttaaatggtgaatct
cgaaaacgtgcccggctttccgatgtgcgcgatgaaacgcgtgcaaacaaccccgatgac
gaagccgagtatcaaggagctgcctcgcccgacaccccaccaagaactcagtatgagtta
atgcgcgataatgggttcgagcatttgcgaactgaggctgccgatgaccagaaggcgacc
cagcggctacggatgcgaccaaaccgtctaggagaaaatgtggtcgcagaaaatggcatt
cttgagcaagtcatatgcatcaactttatgtgtcacacgagactgaactgcgagcttggg
ccccttctcaactttgttgtgggcgagaatggcagcggaaagagcgctgttttgacagca
atcaccctctgccttggtggaaaggcaagctcgacgaaccgcggtggtagcctgaaaagt
tttgtcaaagaaggagaggataaggctattttgactgtcaagatcaagaaccaggggcct
gatgcttatcagcacgatatttacggcgattccatcaccgtggagcgttggttcaacaaa
actggcgggagcggcttcaacctgaaaacagccaccggctctattcactcgaagaagaag
gaagaggttgaccaaatcgtggagtactacgccctgcaggtcgacaatccactgaacgtt
ctatctcaagacaacgcccggcaattcctcaacgcctcaagcaaggcgcagaagtacaag
ttcttcatcgagggcgtccagctacagcaattggataacgactacaagctgactgctgaa
tatgtgagccaaatagacaccaagataccagatcaagaacagaaaatcgagcttctcaaa
gtgcaacgggcaaacgcagaacgcttattggagactctggagggcgagcggtcattacgc
gacaaaatcaacacaatgcgcttaaagttggcctggtcacgtgtcgatacctgtgaaaaa
agactggcgcaaaaggaggcgaatctcgccgagatctccaccaagttgatttcggctgaa
gaaaagttcggcttgaaaagtcgagcgttggagcaggcggatcaagaggtggaaaccacc
aaggcgaagctcgagagggcgaaggaagaggagccagagctgcaggccaaagttgaagag
gcgaaggctcataaggaggccatggtagcagacctcatgaaggtccaggccgaggagcga
gaggctcaccaaaactggaaagccatgactgaccaggtcaaggatttcgagagaaagatt
gcgcaggaagagaggagtctgcaggaggcacacggtggtctccaaaccctgaagatgaag
gagcgcgacgaggctcgggccagggtccaggagctcgaacaaaaaatcgatgacaacaaa
cagctcgttcctcggatcaagagccagatgagtgattcggcaagggctctgaaccccatc
aaggagcgggttaccaagaagcaggaggagatccacaatctcaaaaaggagattgagaaa
acccaggcacaaatcggtgtgccgcttgctgcttaccacaagaatatgccgaggctgtta
aaggccattgacggcgacaagaggttccagcagaaacccatcggcccgctgggcaccgtc
gtgcatcttcataaaccggaatggggagcgattttggagtcttattttggcaacaacctc
aacggctttgtcgtgttcagcaaagccgacatgaatgttcttgcagacttgatgaggcga
tgcgacatcgacagcaaccgcaatcccatcttcgtgggccagcgaaatgccctcaatctg
gcgggaaaagagccagatgcggacttcgacaccatcctgagagtactcaagattgacaac
caagctgttcgggatacacttgttatcaaccacgcgatcgagcaagtgctcttgattcat
aagcgcacaacggctcagagcgtgatgatggatggaatggcaccgccccgcaatgtcaag
agatgcatcacattccacgattccaagaacgaggggctaagcattgaaatgaagccgagc
ggcatatcaacaagtccggtcaggattgggactcagcccaagcgcctgaagacggaatct
gcctctcagatggccttcttgaaggagtccctgtcaaaattggagtcggaactccaagct
ctccgagttgaatacaaacgtgtccaggatgaaaactcccaccacaagacagcccttgcc
aaagcggagaaagagggggccgttctcgcacagcagctgcgagagaccgaactagagctt
gcggagatcgaagtagctttggacgagtgggatgggtctgacgcccgacttcaaagtctg
cgtgagcagctggctcaagcactggagcagaaagctcaccacggtcaacaggtgactggg
cttattgtggccaaagaccagaaaaacgtacttgccgaggaggcttacaaggcactcaaa
gctcagaagctgcagctcaaggactgtgaagccagtgtgaataaggcagaggaaaaggcc
aagtctgcggaggcgcaccggcatattgtgcttcgagaaaagctcgacagtgaagacgcg
tataagcaactgaaggcagaacaaaaggaagcggaagaaagtattgggagggaaaaggat
aggatcgcggagagagaggcggaggccattcaagtgtgcccagaacgcgtgcatttgcta
gacggcgagacggagaagtccgtcaatacacagtactttgctctgcgggctcgatacgac
aaaatgaccagcagacgccagttgaacgagcaggaagttattgagcaagccgaaaaggtt
cggaagaagtacgacgaagcagttaatggcctcatctcgatggtggagtcaagcgaacgt
ctcaagcattcgttgagcctacgtttggacaagtggcgcaagttccagcggtacatctcc
gcccagtcgcgtgtgaacttcatatatctcctcagcgaacgcgggtaccgagggaggctg
ctgctggatcataagcgcaggctcctggatgttcatgtggagcccgaccacaccgagaaa
cgtgccagtggacggagtaccaagacgttatccggcggagagaaatccttttcttcgatt
tgtatgctgttggccatctgggaagccatgggttcgccgctgcggtgcttggatgagttt
gatgtgtttatggacaatgtgaaccgggctgttagccaaaatatgctggttgccgctgct
cgaaggtcggtcaaccggcaatacatcttcatcacacccaacgctatcgacccaaagatc
atcgctgaaaaagacgtaaaacttattcgactcgttgatccacgccaacaacgactcacc
agcatgcaaacaatatcatga
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