Podospora pseudocomata: QC762_506100
Help
Entry
QC762_506100 CDS
T09797
Name
(RefSeq) hypothetical protein
KO
K18725
nucleoporin POM152
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
QC762_506100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsd03019
]
QC762_506100
Messenger RNA biogenesis [BR:
ppsd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
QC762_506100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig-like_POM152
Ig_Pom152
Ig-like_Pom152_9
Ig-like_Pom152_1
TMD_POM152
Motif
Other DBs
NCBI-GeneID:
87910938
NCBI-ProteinID:
XP_062742187
LinkDB
All DBs
Position
5:2301638..2306060
Genome browser
AA seq
1271 aa
AA seq
DB search
MTSVGAFPQTPVAPRVGRARPTPFNDNLPPTLQHQPRRPPANPNPLPVAPQAGGAPPTAN
PPVIPLNILDAPTQRLYAVAVYAALLAWKLYDWAGVVEEDTESLWLFLKWVAIDCAFLFG
LPELRIPWLELSQPFVISAFFIHAFIDWSLMFNLGFGWQGWIIGIVKMFYDRELAISEHN
VKLSSIIHNHSLIMGKQIINILPEGSAVLNPERHPLCLSSDQKTALIPMFFNATIPVEVE
LLRTDLETGHQESIKLGRVHLRDIERKAKKNSDLDDMQSVVHFEYPAKKPGAYQLGKVLD
EYKLEVQRPGSPTFVVPCPKAWVGPTTTPGRCLADLSDLTLQVEGTPPLKITYSRAINGK
DVSFHFQSLQPEGFTSPLGAIRPTSLVQDDDEDISWARPQRVPVSVNESMYASGKWQYSV
DEVQDGFGNVVKYISPSEDPEGKAKPKELVQDFLVKERPILKLDGCDLRNPLRAARGDSK
ELPVKFGIGGTPDSTAHSLSWLFSPIDTLTDTGDHGDVVSVGTFNAKNARDKPRISAPGL
YTLKSVSSGGCEGEVREPSSCLLLNPLEPKLSLRSEEIPDTCAGNSIGLQVDLHLIGTPP
FILRYDIIENGKTRHADPVKIPGLRHQMELIPSVSGHHKYIFTHISDDVYKGVKLSGPEF
TLEQDVKPQASAILQQTIGKKACLGDHVTADVMLLGDAPFTLEWEIIHDGKRKAHKATNI
EGNEYQISTPPLTQGGEYTLALSSVQDKRGCRNFLKQELKISVRRQSPRAAFGQIEHKRK
ITGVEGSPLSLPLRLTGEGPWKVSYIKLNDDAATRQERTVRNDNGFLSVRERGTYQLVDV
WDNQCHGVIDPKTSTFEVDWFSRPDMSVLLSHGVQRTETGYRLEDVCEGDVSGFEVGMKG
TPPFSIEYEIRHKPPQGSASTAKKKFDVALRKESIQADTSKAGTYTYKFTALEDHLYNSD
RNFKPVLVEQKVNSKPTAAFAKPGQNFKYCKSEQGAEEGIPVVLSGVPPFSLEVEIKHQS
AALPEIYRTPVINSNTYEIQIPRHQLRLGTQNIRIRDVKDGSGCHSATANIGGPSIQVQL
FEAPTIYPLETRTDYCVGERISYTLSGSPPFDVWYTFDGVERKAKSTTTNFRRVAESPGE
FVITTISDKSSECKAPVNVAKTIHPMPAVKISRGKNARVDIHEGGEVEILFEFWGTPPFE
FTYTRSTNAKKGQKSVVLETRHDISHEHSKVIRASQEGTYEVVAIKDKFCAFSTMGGDEK
GDRKGQKKLGY
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcgtcggtgcctttcctcagacccccgtggcaccccgagtagggcgtgcccgg
ccaactcccttcaacgacaatcttccgccaaccctccaacaccagccccgacgaccaccg
gcaaaccccaatccgctgcccgtggctccccaagcaggcggcgcaccccccactgccaac
cctcccgtcattccattaaacatcctcgatgccccgacacagcgtctgtacgcggttgcc
gtctatgctgcgctcttggcatggaagctctacgactgggccggcgtggtggaggaggac
accgagtccttgtggctgtttctcaaatgggttgccatagattgcgccttcttgttcggc
ctgccagagcttaggataccatggctggaactatcgcagcccttcgttatatcggccttc
tttattcacgccttcattgactggtccttgatgttcaaccttgggtttggttggcaggga
tggatcatcggaattgtcaagatgttttatgatcgcgaactggctatttctgagcacaac
gtcaagctttccagcattattcacaaccactcgctcatcatgggcaagcaaatcatcaac
attctccccgagggctcagcggtgctcaaccccgaacgacacccgctctgcttgagcagt
gaccagaagaccgcgctcatccccatgtttttcaacgctaccattccagtcgaagttgag
ctgcttcgcaccgatctcgaaacgggtcatcaagagtccatcaagctcggcagagtgcat
cttagggatatcgaacgaaaggccaagaagaatagcgaccttgatgatatgcagtctgtg
gtccactttgaatatcctgccaagaagcctggcgcctaccaactcggaaaagttctggac
gagtacaagttggaggtgcagcgtcctggttccccaacctttgttgtgccttgcccaaag
gcttgggttgggcccacgacaacccccggaaggtgtcttgctgatctctcggatctgact
cttcaggtggaaggtactccgcccctcaagatcacttacagccgtgccatcaatggcaag
gatgtcagctttcactttcagagcttgcagcccgagggattcacgagtcctctcggcgcc
atacggcccacgagtctggtgcaggatgacgatgaagacatctcctgggccaggccccag
cgcgttcctgtcagtgtcaacgagtccatgtacgccagcggaaagtggcagtactctgtt
gacgaggtccaggacggatttgggaacgttgttaagtacatttccccttcggaagatcca
gagggcaaagccaagcccaaggaactggtccaggacttcctcgtcaaagaacgcccaatc
cttaaacttgatgggtgtgatctgaggaacccgttgagggctgccaggggtgactccaag
gagctgccggtcaagtttgggattggcggtacgcctgattcaacagcgcacagtctgagc
tggcttttctcgcccatagacacccttacagataccggagatcatggagatgtggtttcg
gttggcaccttcaatgctaaaaacgccagggacaaaccaaggatctctgctcccggtctt
tacactctcaagtctgtatcttccggtggatgtgagggtgaagtgcgggagccatcctcc
tgcttgcttttgaaccctctcgaaccaaaactttcactgcgttcagaagaaattccagac
acatgtgctggcaactcgatcggtctccaggtggaccttcacttgattggcaccccaccg
ttcatccttcgatacgatatcattgaaaacggaaaaacgagacacgcggacccggttaag
atccctggcctgcgccaccagatggagttgattcccagcgtttccgggcaccacaagtac
atcttcactcatatcagtgacgatgtctacaagggagtcaaactttcgggcccagaattc
accctggagcaggatgtcaagccgcaggcgagcgctattctccagcagaccatcggtaaa
aaggcttgcttgggagaccacgtgacggcggacgtcatgctcctgggagacgcacccttc
actttggaatgggaaatcatccacgatggaaagagaaaggcccacaaggctaccaacatt
gaagggaatgagtaccaaatctcgacgccgcctttgacccagggtggcgagtacactctg
gcattgagcagcgtgcaggacaagagaggctgccgcaactttttgaagcaagagctgaag
atctcggtacgtcgccaaagcccaagggctgcttttggccagattgagcacaagcgcaag
atcacgggcgtcgagggctcgccccttagcctgcctttgaggctcactggtgagggaccc
tggaaggtctcgtacatcaagctcaacgacgacgcggctacgcgccaagagaggactgtc
agaaacgacaatggttttctttcggtccgggaacgtggtacctaccagcttgtggatgtt
tgggacaaccaatgccatggtgttattgaccccaagacctccacatttgaggtcgactgg
ttctctcgccccgacatgtctgtgctgctctctcacggcgttcagcgaacggagactgga
taccgcctggaagatgtctgcgaaggtgatgtgtctggtttcgaggtgggcatgaaggga
actcccccattctcgattgagtacgagattcgccacaagccccctcaagggtcagcgtct
actgccaagaagaagtttgatgtcgccttgagaaaggaatcaatccaagccgacacatcc
aaggccggcacatacacgtacaagttcacggcgttggaagaccacctctacaacagcgat
cgcaacttcaagcccgtgctcgtagagcagaaggtgaacagcaagcccacggcggcattt
gccaaacctggacaaaacttcaaatattgcaagtctgagcagggtgcggaagaaggaatc
cctgtcgtcctctcaggtgtgcctccattttctctggaggtcgagatcaagcaccaaagc
gccgccctccccgagatttaccggacccccgtcatcaactcgaacacgtacgaaatccag
atccctcggcatcagcttcgccttggtacccagaacatccgcatccgcgatgtcaaggat
ggcagcggctgccactcggccacagccaacattggcggtccttcgatccaggtgcagctc
tttgaggcgcccaccatctacccgctcgagacacgcaccgactactgcgtgggtgagcgt
atctcgtacaccttgtcaggcagcccaccattcgacgtctggtatacctttgacggcgtc
gagcgcaaagccaagtcaaccacgactaacttccgtcgcgtggccgagtcgcctggtgag
tttgtcatcacgaccatttcagacaagtcgtccgagtgcaaggcgcctgtcaatgtggcc
aagacgatccaccccatgccggccgtcaagatcagcaggggcaagaacgctcgcgttgat
atccacgaaggtggagaggtggagattctgttcgagttctggggcacgcctccgtttgag
tttacgtatactcgtagcacgaacgcgaagaagggacagaagagtgttgtgttggagacg
aggcacgatattagccacgagcacagcaaggtcatccgggcgagccaggagggcacgtac
gaggttgtggccatcaaggataagttttgcgctttttcgacgatggggggagatgagaag
ggtgataggaagggacagaagaagctggggtattga
DBGET
integrated database retrieval system