Podospora pseudocomata: QC762_506300
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Entry
QC762_506300 CDS
T09797
Name
(RefSeq) hypothetical protein
KO
K05236
coatomer subunit alpha
Organism
ppsd
Podospora pseudocomata
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppsd04131
]
QC762_506300
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppsd04147
]
QC762_506300
Membrane trafficking [BR:
ppsd04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
QC762_506300
Exosome [BR:
ppsd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
QC762_506300
Exosomal proteins of bladder cancer cells
QC762_506300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
TPR_COPA_B
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_IFT140_1st
Beta-prop_DCAF12
WDR90_beta-prop_4th
TPR_IFT80_172
Motif
Other DBs
NCBI-GeneID:
87910959
NCBI-ProteinID:
XP_062742208
LinkDB
All DBs
Position
5:complement(2384214..2388720)
Genome browser
AA seq
1223 aa
AA seq
DB search
MQSASGMLTKFESKSSRAKGIAFHPKRPWILVSLHSSTIQLWDYRMGTLIDRFEEHDGPV
RGVDFHKTQPLFVSGGDDYKIKVWSYQTRRCLFTLNGHLDYIRTVFFHNELPWIVSASDD
QTIRIWNWQNRSLLCTMTGHNHYVMCAQFHPKDADLVVSASLDQTVRVWDISGLRKKHSA
PASIYESQMNQANQQQADMFGNTDAVVKFVLEGHDRGVNWVSFHPSMPLIVSAGDDRLIK
LWRMSETKAWEVDTCRGHFQNASGCLFHPHQDLILSAGEDKTIRVWDLNKRTAVHTFKRE
NDRFWVIAAHPEINLFAAGHDNGVMVFKLERERPASAVYQNQLFYITKEKHVKSYDLQKN
VESPTLLSLKKLGSPWVPPRTLSYNPAERSVLVTSPADGGSYELINLPRDGTGAIEPTES
KRGSGNSAIFVARNRFAVLNTAAQTIDIKDLQNNVTRSFKPPLGTSDIYFGGTGNLLIIT
PTAVHLYDVQQKKTTAELAVNGVKYVVWSNDGLYAALLSKHNVTIVTKTLEQVSTLHETI
RIKSATWDDAGVLLYSTLNHVKYTLLNGDNGIVRTLDQTVYLVRVKGRNVYCLDRTAKPR
ILQIDPTEYRFKLALVKRNYEEMLHIIQNSSLVGQSIISYLQKKGYPEIALQFVQDPTTR
FELAIECGNLEVAVEMAKQLDRPKLWTRLSAEALAHGNHSIVEMCYQKLKQFDKLSFLYL
TTGDEAKLTRMAKIAEHRGDFGSRFQNALYLGEVEDRIQMFKEIDLYPLAYATAKAHGLE
EECQSILEAAGLTEDELNFATFGEPLTPPKPVVPTYKANWPTKATSQSFFEKALLGQMEG
LSLEDESAAVNGVDAEAEEDGAKRDLLGDADEEEEDAGGWDMGDDVVPEIEEGLADVNIA
EAGGAGSSEADLWARNSPLAVDHAAGGSFESAMQLLNRQVGAVNFAPLKSRFLEVYQASK
TYLPASAGLPPLVNYVRRTVEEADLRKVLPVIPRDLEYLAEHDLHRGYKCMKTNKLEEGV
TIFKNILHSLLVNAVGSEDEVAEAKKVITAAAEYTLAMSIELERRSLGTPEAILANPELL
KRNLELAAYFTIPKIEVAHRQLALSNAMTQSMRSKNYSSALSFANRIISNGDAGGALAKL
LEAARRNKATCERNPHDAVEIEFDQFAEFEICAASYTPIYSGTSYEECAFDGSKYHTKYK
GTVCKVCEVCEVGKHGSGLKLFA
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccgcttcgggcatgctcacaaagttcgagtccaagtcgtcgcgcgcaaaggga
atcgcattccatcccaaacgaccatggatcctcgtctcgcttcactcctcgaccattcag
ctttgggactaccgtatgggcacactgattgaccgattcgaagagcacgatggccccgtc
cgcggtgtcgacttccacaagacgcagcccctgttcgtctcgggtggtgacgattacaag
atcaaggtctggtcttaccagaccaggaggtgtctgttcaccctgaacggtcacttggac
tacattcgaaccgtcttcttccacaacgagctcccttggattgtcagcgcctctgacgat
cagacgattcggatatggaactggcagaaccgctccctgctttgcaccatgacgggccac
aaccactatgtcatgtgtgcccaattccaccccaaggatgccgacctcgtcgtgtccgcc
tcgctcgatcagactgttcgtgtttgggatatctccggcttgcgcaagaaacactccgcc
cctgcgtccatctacgaaagtcaaatgaaccaggccaaccaacaacaagccgatatgttt
ggaaacaccgatgccgtcgtcaaattcgttctcgagggtcacgatagaggcgttaactgg
gtctcgttccacccttccatgcccctgatagtgtcggcgggcgacgatcgtctcatcaag
ttgtggcgcatgagcgaaaccaaggcgtgggaggtcgatacttgccgcgggcatttccag
aacgccagtgggtgcttgttccaccctcaccaggacctcattctttcggccggcgaggat
aagacgattcgtgtttgggatcttaacaagcgtacggcggtacacacgttcaaaagagaa
aacgacagattctgggtcatcgccgcgcatcccgagatcaaccttttcgctgctggacac
gataatggtgtaatggtgttcaagttggagcgcgagagacccgcgtcggctgtttaccaa
aaccagctcttctatatcaccaaggagaagcatgtcaagtcatacgacctgcaaaagaac
gtcgagtccccaactctgctgtctctcaagaagctgggcagcccctgggttcccccaagg
acgctgtcctacaaccctgctgagcgttcggttcttgtcacatccccagcggacggcggc
tcttatgagctcatcaaccttccccgtgatggtactggcgccattgagccaaccgagtcc
aagcggggctctggtaactcggccatctttgttgcccgcaaccgctttgccgtcctgaac
accgctgcccaaaccatcgatatcaaggaccttcagaacaacgttacccggtccttcaag
ccacctcttggcactagcgacatctactttggtggcacgggtaaccttctcatcatcacc
cccacggcagtacacctttacgatgttcagcagaagaagaccactgccgagctcgccgta
aatggtgtcaagtacgtcgtctggtccaacgatggcctctatgccgctctcctcagcaag
cacaatgtcaccattgtgacgaagacccttgagcaggtcagcacgctccacgaaacgatc
cgcatcaagagcgccacctgggacgacgccggtgtcttgttgtattccacccttaaccac
gtgaagtacacgctgttgaacggcgacaatggtatcgtgcgcactcttgatcagactgtc
tatcttgtgagggtcaagggccgtaacgtctactgcttggatcgtactgcgaagcccaga
atcctccagattgaccctaccgagtaccgcttcaagcttgcccttgtcaagagaaactac
gaggagatgctgcacatcattcagaactccagcttggtcggccaatccattatttcgtac
ctgcaaaagaaaggctacccagagattgcccttcagttcgtgcaagaccccaccacccgc
ttcgagcttgcgattgagtgcggaaaccttgaggtggctgttgagatggccaagcagctg
gacaggccaaaattgtggacgagattgagcgccgaggcccttgctcacgggaaccactcc
attgttgagatgtgctatcagaagctcaagcagttcgacaagctctccttcctatatctc
acaaccggtgacgaggccaagctgacaaggatggccaagattgcggagcaccgcggagac
tttggctctagattccaaaacgccctctatctcggtgaggttgaggacagaatccagatg
ttcaaggagatcgatctctatcctctggcctacgctacagccaaggcccacggtctggag
gaggagtgccagtcgatcttggaggctgccggtctcacagaagacgagctcaacttcgcc
acctttggcgagcctctcacgcctcccaagcccgttgttcctacatacaaggccaactgg
ccaacaaaggccacatcgcaatccttcttcgagaaggcgctgcttggccagatggagggt
ctttcattagaagacgagtcagcggcggtcaatggtgttgacgccgaagctgaggaggat
ggtgctaagcgcgacctccttggagacgccgatgaggaggaggaggatgctggcggctgg
gacatgggtgatgacgttgtgccagagattgaggagggcctggccgatgtcaacatcgct
gaggctggtggtgctggcagcagcgaggctgatctctgggctcgcaactcacctctggct
gttgaccatgctgccggtggctcgtttgagtctgcgatgcaactgctcaaccgtcaggtt
ggtgccgtcaactttgctcctctcaagtcccggttcttggaagtataccaggcttccaag
acatatctccctgcgtcggccggccttcccccattggtcaactatgttcgccgcacggta
gaggaggctgatcttagaaaggtgcttcccgtcatccccagggatctggagtaccttgcc
gagcatgatcttcaccgcggttacaagtgcatgaagaccaacaagttggaagagggtgtg
actatcttcaagaacatcctgcactcgctgcttgtcaacgcggttggctcggaggacgag
gttgcggaggccaagaaggtcattactgctgctgccgagtacaccctcgccatgtcgatt
gagcttgagcgcaggtctcttggcacaccagaggccatcctggccaaccccgagctcctg
aagcggaacttggagcttgccgcttactttaccattcccaagattgaggtggctcatcgc
cagttggctctgtctaatgccatgactcagtcgatgcgcagcaagaactacagcagcgcg
ttgagctttgctaacaggataatctccaacggtgatgctggcggcgctttggccaagctt
ttggaagctgcccggagaaacaaggccacctgcgagcgcaaccctcacgacgcggtggaa
attgagtttgatcaatttgccgagtttgagatttgcgcggcgagctacacgcccatctac
agcggcacctcgtatgaggagtgcgcgtttgatgggtccaagtaccacaccaagtacaag
ggcaccgtctgcaaggtgtgcgaggtgtgcgaggttggcaagcacggcagcggtttgaag
ctttttgcttga
DBGET
integrated database retrieval system
