Podospora pseudocomata: QC762_506590
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Entry
QC762_506590 CDS
T09797
Name
(RefSeq) hypothetical protein
KO
K24755
WD repeat-containing protein 76
Organism
ppsd
Podospora pseudocomata
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppsd04121
]
QC762_506590
03036 Chromosome and associated proteins [BR:
ppsd03036
]
QC762_506590
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
QC762_506590
Ubiquitin system [BR:
ppsd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
QC762_506590
Chromosome and associated proteins [BR:
ppsd03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
QC762_506590
DNA repair and recombination proteins [BR:
ppsd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
QC762_506590
DSBR (double strand breaks repair)
Other DSBR factors
Others
QC762_506590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_C
S100PBPR
S-Me-THD_N
Motif
Other DBs
NCBI-GeneID:
87910991
NCBI-ProteinID:
XP_062742450
LinkDB
All DBs
Position
5:3074032..3076082
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AA seq
521 aa
AA seq
DB search
MPPKKEPVISAFERKRLENIAANNAILSEISATADKIIPSKATPTKTKAKKSTPRKREPT
KVAHQPATRRSTRLAGVDADNDTLKRKFEVEVEAAAEKAKAKKLRVNGDLQLGDISVEGR
KWEGGVDGLGLLKGLSVRGAQPGVKTFDEDDVEETSDENLKELRLRMRNLKMYDKWPVAD
IKIVPQRIYSMGFHPTEDKPIIFAGDKEGAMGIFDASQEPIKTEDDEDEESYSDPVISAF
KTHARTITSFQFSSVDANAVYTSSYDSSIRKLDLDKGVSTQVFAPVDAGVELPISAMDIP
STDPNTIVFSTLNGQLGRHDIRTKPADAEIWHLVDPKIGGFSLHPLQPHLVAAASLDRTL
KIWDLRKIQGTGDMRKPVLLGEHESRLSVSHASWSSAGDIATSSYDDTIKIYSFPDAGSW
KAGVELFDDQMEPVHKIAHNNQTGRWVTILKPQWQKSPFDGIQKFAIGNMNRFVDIYAAN
GEQLAQLDGDGITAVPAVAHFHPTLEWVAGGNASGKLCLWM
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgccccctaagaaggagcccgtcatcagtgcctttgagcggaagcgtttggagaacatt
gcggcgaacaatgcgatcctcagtgagatatcagcgacggctgataagatcatcccttcg
aaagcgacacccacgaaaaccaaggcgaaaaaatctacgccacgtaaacgcgaaccgacc
aaagtcgcccaccagcccgccacaagaagaagcacgcgcttagctggtgtcgacgctgac
aacgacaccctcaagcgcaagtttgaggtcgaggtcgaggccgcggctgagaaggcgaaa
gccaagaagctccgagttaacggagacctgcagctaggagacatttcggtagaggggcgc
aaatgggaaggcggtgttgacggactcgggctgctcaagggcttgtcagttcgcggtgcc
caacctggtgtcaaaacctttgacgaagacgatgtcgaggagacttcagatgagaatctc
aaggagctgagactgcgcatgcgcaatctcaagatgtacgataaatggccagttgccgac
attaagattgttccgcagcgcatctactcaatgggcttccatccaacagaggacaaaccg
atcatctttgccggcgataaggaaggggccatgggtatcttcgatgcgtcccaagagccg
atcaagaccgaagatgacgaagacgaagaaagctactctgaccccgtgatatcagcattc
aagacgcacgctcgcaccattacctcttttcaattttcctccgtcgatgccaatgccgtc
tacacatcctcttacgattcctccatccgcaagctcgacttggacaagggggtatccact
caggtttttgccccggtcgatgcaggcgtggagcttcccatcagtgcaatggacatacca
tcgacggacccaaacacgattgtattctcgacactaaatggtcagcttggacgccatgac
atccggaccaagccggcggatgctgagatctggcatctcgtggatcctaaaatcggaggg
ttttctttacatcctctgcagcctcaccttgtggctgccgcatcgctcgaccgcacttta
aagatctgggacttgcggaaaatacaagggacgggggatatgcggaagcccgtcttgctg
ggagagcatgagtcccgcttgtctgtctcacatgctagctggagcagcgccggcgatatt
gcgacgtctagctacgatgataccatcaagatctactctttccctgatgcgggctcctgg
aaagcaggcgtcgagctttttgacgaccagatggaaccagtgcacaagattgcccataac
aaccaaactggacgctgggtaaccatcttgaagcctcagtggcagaagagcccatttgac
gggattcaaaagttcgccattggcaacatgaaccggttcgtggacatttatgcggcgaac
ggagagcaactggcacagctggacggcgatggcatcacggctgtgccggctgtagcgcat
tttcaccctacattggaatgggttgccggcggtaatgccagcggcaagctgtgcctgtgg
atgtag
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