Podospora pseudocomata: QC762_510320
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Entry
QC762_510320 CDS
T09797
Name
(RefSeq) hypothetical protein
KO
K13103
tuftelin-interacting protein 11
Organism
ppsd
Podospora pseudocomata
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppsd03041
]
QC762_510320
Spliceosome [BR:
ppsd03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
QC762_510320
Other components
Complex C specific factors
QC762_510320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
FUSC
Motif
Other DBs
NCBI-GeneID:
87911347
NCBI-ProteinID:
XP_062742937
LinkDB
All DBs
Position
5:<4645827..>4648789
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AA seq
986 aa
AA seq
DB search
RNEHRLQHKTRIVALPSFFLIFFFLHLLIQDNGKMPFDPTTFTKATAADYSSSESDAEDD
EYLIPSTNHHDDEFADHNPRKRRRTGRHAKESAALGIFGSESEDEGPSRKWKHKPLRNKG
VSFVSSSNVKPGPVEDEDDDEDKEDDKDDEYAEWDDDGKPTMMTSTATAADGDEDEDDED
EDMGGIGLGFGGGGEAAAAAQGLGWTPPTQQQKPLKSAVLKAMPFVKSKVDPSNPLGTGF
VPMSARGPTLLNRDDDEPAKPRVPAASAFTKGKGGKIKTNTNSFAARMMAKMGYQEGKGL
GKEGQGRNIVIEANLRPQGAGLGAVKEKTEQERQEEKRQARLRGEEVIDSEEEEKKKKAA
RRKKALSGGLGSGTGSGASTPKRQKPKYLTMDEIKKAAPGLNIPDAFTPILDLTGPGKKM
LTTSSGLMTPTGGTAPVESAETAESRKLVRRAQNDFMAILEEWQSLQERKAYIELQLKQE
RQEMEELATTLQGNQSLTSACAAASNPTESGEIDRKADLNYRLGRIISGLSDTYSSLSDK
MLPQIKEELTSLVVAAIHPAFNQYRQLWDPLEEPKPSFVDGLKSIRGLLSLDQQIKKTYR
RPTANPYETMMYELWYRTVTSAVREWNVREPDQLIAVLEAWDDLLPGFVRTQLLQDIIRK
LEEAVQKWQPKRHSEHLPHTWIFPWLPYLPSVHLDPRSSSGLVADVKRKFRQLIDSWEFK
RGVIPGLKPWKQVLRGSSNKSDQWGPLVMNHLLPGLARYLGKSFKVDPRDQEPYMKVLDR
VFEWLEFVSPTMIGEVLVAEVFPMWHEALYQWLLLEDANYDEIGQWFEWWQGEVFPEEIR
VLPSITAEFEKGTGLIEKALDLGDRAKDELKPPEKGPALRSERRDREHKTRKPEPLVETP
VGEPPREVSFRQVMEEWCQENDLQFMPEKNVHAEGPMYKISGNDAKKSVLVWFKGNTMSV
KTKTHGTVEVRRENEDEYGVLLDLVV
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
cgcaacgaacaccgactacaacacaagacaagaattgttgcgcttccttcctttttttta
atttttttttttttacacctcctcatccaagataacggcaagatgccctttgatccaaca
acattcacaaaggccacggccgccgattattcctcctcagagtccgacgctgaagatgat
gaatatttgataccctcgaccaaccaccacgacgatgaattcgccgatcacaacccccga
aaacgaaggcgcaccggccgccatgcaaaagagagcgccgcccttggaattttcggatcc
gaaagcgaagatgaagggcccagtcgaaaatggaaacacaagccattgcgcaacaagggc
gttagcttcgtatcgtcgagcaacgtgaagcccggcccggttgaagacgaagacgatgat
gaggacaaggaagacgataaggatgatgagtacgccgagtgggatgacgatggaaaacct
accatgatgacctcgactgccaccgccgccgacggagacgaagacgaagacgatgaagac
gaggacatgggaggcatcggcctgggctttggtggtggtggtgaggctgctgccgctgcc
caaggtctcgggtggacccccccaacgcaacaacagaagcctctaaaaagcgccgtcttg
aaggcgatgccattcgtcaagtcaaaagtagatcctagcaaccctctgggaactgggttt
gtgccaatgtcggcgagaggtccaactcttctaaaccgtgacgacgatgaaccagcgaaa
ccgcgcgtacctgcggcgagcgcgttcacaaagggtaaaggtgggaagatcaagaccaat
accaattctttcgcggcgagaatgatggccaagatgggttatcaggaaggaaaaggtctt
ggaaaggagggccagggtcgaaacattgtcatcgaggccaacctgcgcccacaaggcgcc
ggtctcggtgctgtcaaggaaaagactgaacaggaaaggcaagaagagaaacgacaagca
cgtctcaggggcgaggaggttattgactcggaagaggaggaaaagaaaaagaaggccgcg
cgcaggaagaaggctctgtctggtggactgggcagtggtacaggtagtggcgcaagcacg
cccaaacgccagaagccaaagtacctgacaatggatgagatcaagaaggccgcccccggc
ctcaatattcccgacgcgtttacccctatcttggatctgaccggtcccggcaaaaagatg
ctgaccacctcgtcaggcttgatgacccccactggtggtactgcgcctgttgagtctgct
gaaacggccgaatcccggaagctcgtccgccgtgcccaaaacgacttcatggctattctt
gaggaatggcagagcttacaagagcgcaaggcatacattgagctgcagttgaaacaagaa
aggcaagagatggaagagctggccacaacgttgcaaggcaatcaatcactcaccagtgcc
tgcgctgcagcgtccaacccaaccgagagcggcgagattgaccgcaaggctgatctcaac
tatcgactgggtcgcatcatttcagggctcagtgatacttactcgtctctgtccgacaag
atgttacctcagatcaaggaagagctcacatccctcgtcgtcgctgccatccacccagcc
ttcaatcaataccgccagctctgggatcctctcgaggaacctaaaccaagcttcgtcgat
ggtctcaagtctatccgaggcttgctcagtctcgaccaacaaatcaaaaagacgtaccgc
cgaccgaccgccaacccctacgaaacaatgatgtacgagttgtggtaccgaaccgtcacc
agcgcagtccgcgaatggaacgtccgggaaccagaccagctcattgctgtgctagaagct
tgggatgacctcctgcctggctttgtccgcactcagcttctacaagatatcattcgcaag
ctggaggaggctgttcagaagtggcaaccaaaacgacacagcgagcacctccctcacact
tggatctttccctggctgccgtatttgccttcggtccatctcgacccaagaagctcgtct
ggtctggtggcagatgtcaagcgcaagttcagacagctcattgactcgtgggagttcaag
aggggtgtcattcccggcttgaaaccctggaaacaagtgctgcgtggaagcagtaataag
agcgaccagtgggggccgctggtgatgaaccatcttttgcctggtttggcgaggtatctt
gggaagagcttcaaggttgatccgcgagaccaagagccgtacatgaaggtgttggatagg
gtgtttgagtggttggagtttgtgagtccgaccatgattggggaggtgctggtggcggag
gtgttccccatgtggcatgaggcgctttaccaatggcttttgctggaagatgccaactat
gatgagattggtcagtggtttgagtggtggcagggggaggttttccccgaggagattaga
gtgttgccatccatcacggcggagtttgagaagggtactggtctcattgagaaggcgctt
gatttgggcgatagggcgaaggatgagctcaagccaccagagaagggccctgctctcagg
agtgaaaggcgggatagggagcataagacaaggaaacctgaaccactggtggaaacgcct
gttggggagccgccaagggaggtttcgttcagacaggtcatggaggagtggtgccaggag
aatgatttgcagtttatgcctgagaaaaacgttcatgccgaagggccgatgtacaagatc
tctggcaatgatgccaagaagagtgttttggtgtggtttaaggggaacacgatgtcggtg
aagacaaagacgcatgggacggtggaggtcaggagggagaatgaggatgagtacggggtg
ttgttggatttggtggtgtag
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