Podospora pseudocomata: QC762_511400
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Entry
QC762_511400 CDS
T09797
Symbol
DHH1
Name
(RefSeq) DExD/H-box ATP-dependent RNA helicase dhh1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QC762_511400 (DHH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsd03019
]
QC762_511400 (DHH1)
03036 Chromosome and associated proteins [BR:
ppsd03036
]
QC762_511400 (DHH1)
Enzymes [BR:
ppsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QC762_511400 (DHH1)
Messenger RNA biogenesis [BR:
ppsd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
QC762_511400 (DHH1)
mRNA degradation factors
5'-3' decay
Decapping complex
QC762_511400 (DHH1)
Chromosome and associated proteins [BR:
ppsd03036
]
Eukaryotic type
Gene silencing
piRNA pathway
QC762_511400 (DHH1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NA-iREase2
CMS1
Motif
Other DBs
NCBI-GeneID:
87911440
NCBI-ProteinID:
XP_062742816
UniProt:
A0ABR0GDM4
LinkDB
All DBs
Position
5:complement(<4273220..>4274993)
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AA seq
552 aa
AA seq
DB search
MTDSLADKLQATSLNDDEWKKNLNIPTKDNRQQTEDVTNTKGMEFEDFGLKRSLLMGIFE
AGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVIPALQKINPKINKIQCLILVPT
RELAMQTSQVCKTLGKHLGVNVMVTTGGTGLRDDIVRLQDPVHIVVGTPGRILDLAGKQV
ADLSECPMFIMDEADKLLSAEFTPVIEQLLQFHPKDRQVMLFSATFPISVKDFSDKNMKE
PYEINLMDELTLRGITQYYAYVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKI
TELGYSCFYSHAKMQQHARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKN
AETYLHRIGRSGRYGHLGLAINLINWDDRFNLYNIERDLGTEIQPIPATIDKSLYVYENP
ESIPRPISNFRSAGNQQQGQQQPMNPPTHQAQPAGPRPGGASGNWQGRSPQQIEGNQAAN
SFQQFPDQGGRATNTGFAPRGGYQSRGNPGGHRGNGRGRGGFQQTQPSRYPTRGGRGGQG
QTPIQQPPSGPN
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacagtctcgcggacaagctccaggcgacaagcttgaatgatgacgagtggaag
aagaacttgaacattcccacgaaagacaacagacaacagaccgaggatgtcaccaacacc
aagggcatggagtttgaggacttcggactcaagcgatccttactgatgggcattttcgaa
gctggtttcgagaagccctcgcccatccaagaagaaagcattccagttgcgctcaccggg
cgtgatattcttgcgcgcgccaagaacggaaccggcaaaacagctgccttcgtcatcccc
gctctccaaaagatcaaccccaaaatcaacaagatccagtgtcttatcctagtcccgacc
agagaactcgccatgcagacatcccaggtttgcaagacgcttggaaagcacctcggcgtc
aacgtcatggttaccactggtggcacaggcctccgcgatgacattgtccgtctccaggac
cccgtccatattgtggtcggcaccccgggcagaatcctcgatttggctggaaagcaggtg
gcggatttgagtgaatgccccatgttcatcatggacgaagctgacaagcttctctcggcc
gagttcacccccgtcatcgaacaacttctccagttccaccccaaggatcgccaggtcatg
ctgttctcagccaccttccctatttcggtcaaggatttctctgataagaacatgaaagaa
ccttacgagatcaacctcatggacgagctcactctgcgcggtatcacccagtactacgcc
tacgtcgaggagaagcaaaaagtgcactgcctgaacaccctcttttcaaagctgcagatc
aaccagtccattattttctgcaactcgaccaaccgtgtcgagcttttggccaagaagatc
accgagttgggctactcgtgtttctacagtcacgccaagatgcaacagcacgctcgcaac
cgtgtcttccacgactttaggaacggtgtttgccgcaacctcgtctgctcggatcttctc
acgcgtggtatcgacattcaggctgtcaatgtggtgatcaactttgacttcccaaagaat
gccgagacatatcttcatcgtatcggtcgctcgggccgttacggccatcttggtttggcc
atcaacctgatcaactgggatgacaggttcaacctctacaacattgaacgtgacttgggc
actgaaatccagcccattcctgccaccattgacaagagtctctacgtctacgagaatccc
gagtcgattcctaggcccatttccaacttcaggtctgctggtaaccagcagcagggtcaa
cagcagccaatgaacccaccaactcaccaggctcaacccgctggtccccgcccgggaggt
gcttcgggaaactggcagggacggtctccccagcagattgaaggcaatcaggcggcaaac
agcttccagcagttcccggaccaaggcggccgggcaaccaacactggttttgcgccccgc
ggagggtaccagtcccgtggaaaccccggcggtcaccggggcaatggccgaggccgcggt
gggttccagcaaacccagccttcccgctatccgacccgcggtggtcgtggtggtcagggg
caaacccctattcagcagcccccttctgggcccaactag
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