Podospora pseudocomata: QC762_512240
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Entry
QC762_512240 CDS
T09797
Name
(RefSeq) hypothetical protein
KO
K12816
pre-mRNA-processing factor 17
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
QC762_512240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppsd03041
]
QC762_512240
Spliceosome [BR:
ppsd03041
]
Complex C
Other components
Step II factors
QC762_512240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
87911531
NCBI-ProteinID:
XP_062742295
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Position
5:complement(2651189..2652926)
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AA seq
544 aa
AA seq
DB search
MADFNEYPPDLPVRDALILRNHTAAESAHAVVPYSGTDLARPQLGPANPFKGSDEPSVGD
KRKNVLTGRAEETFISEHTFRAKHRAVERDGGPEREFVGSKRMKEMAREVKRGREAKGSA
TVADGEGAYLGPWAKYKNTRWEEVEVEEGGELGSDEEEVEEEVVGSGTVIRAPEVNLQRR
EEVEKQGEETSVFEGGEEFDYLGRGYLHVPQDLDISLTKEVGSVTNFIPKKVVHVWRPHG
RQGSGSAVTSLRLFPGSSHLGLSGGADGLVKIWDVYRNREVLRSYKGHNKAVTDLDFVRA
GGAAGRRFLSGGFDRKVRLWDTETGQCVQRFNVGKTPHVVKFNPGSENGHEFLAGLSDNR
IVQYDSRAGNETVQEYDHHLGAINTLEFIDDSRRFMSTSDDRSLRVWEYGIPVEIKTISE
PDMFALTKSTQHPSGKYVLYQCSDNSIVAYSSGSDKFRQNRKKAWRGHNTAGSAIGITCS
PDGQFVASGDTGGSVCFWDFKTCKLYSKLTADSSGGAINCVAWSEQETSKVFTAGAKGEI
RLWD
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggccgactttaacgaatacccccccgatctccccgtccgcgacgcactgattctccgg
aaccacaccgctgctgaatccgcccacgcggtggtgccgtattctgggacggacctcgcg
agaccacagctcggtccagcgaaccccttcaaaggaagcgatgagccgagcgtaggggac
aagcgaaaaaacgtcctcactgggcgggcggaggagacgtttattagtgagcataccttt
cgggcgaaacaccgggcggtggaacgggatggggggccggagagggagtttgttgggagt
aagaggatgaaggagatggcgagggaggtgaagaggggacgggaggcgaaggggagtgcg
acggttgctgatggggagggagcttatttgggaccgtgggcgaaatataagaatacgagg
tgggaggaggtggaagtggaagaagggggggagttggggagtgatgaggaggaggttgag
gaggaggtggtggggagtgggactgtgatcagggcgccggaggttaatttgcaaaggagg
gaggaggtggagaagcaaggggaggagacgagtgtttttgaggggggggaggagtttgat
tatttgggacgggggtatttgcatgtaccccaggatttggatatttctttgacgaaggag
gtgggaagtgtcacgaattttattccgaaaaaggtggtgcatgtctggaggccgcatggg
aggcaggggagtgggagtgcggttaccagtcttaggttgtttcctgggtcgtcacatctc
gggttgtcggggggcgcggatgggttggtcaagatttgggatgtgtatcggaatcgggag
gtgttgaggagttacaaggggcataataaggctgtgacggatttggactttgtgagggcg
gggggagcggcggggaggaggtttttgagtggggggtttgataggaaggtgaggttgtgg
gatacagagaccgggcagtgcgtgcagaggtttaatgtgggcaagacgccgcatgtggtc
aagtttaatcctgggtcggagaatgggcatgagtttttggcggggttgagtgacaatcgg
attgtgcagtatgattcgagggcggggaacgagacggtgcaggagtatgatcaccatctg
ggggcgattaacacgctcgagtttatcgatgatagcaggaggttcatgtcgacgtcggat
gatcggtcgttgagggtttgggagtatgggattccggtggagatcaagaccattagtgaa
cccgacatgttcgccctcaccaagtcaacccagcaccccagcggcaagtatgtgctgtat
cagtgcagcgacaattccatcgtcgcctactcgtcaggctcggacaagttccgccagaac
aggaagaaggcatggagggggcacaacacggccggtagcgccattggcattacgtgcagt
cctgatgggcagtttgtggcgtctggtgacactggtggtagcgtctgcttctgggatttc
aagacttgcaagctgtacagcaagttgacggctgacagttcgggaggtgctatcaattgt
gttgcttggtcggagcaggagactagcaaggtgtttactgctggtgccaagggggagatt
agactttgggattaa
DBGET
integrated database retrieval system