KEGG   Podospora pseudocomata: QC762_512240
Entry
QC762_512240      CDS       T09797                                 
Name
(RefSeq) hypothetical protein
  KO
K12816  pre-mRNA-processing factor 17
Organism
ppsd  Podospora pseudocomata
Pathway
ppsd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppsd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    QC762_512240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ppsd03041]
    QC762_512240
Spliceosome [BR:ppsd03041]
 Complex C
  Other components
   Step II factors
    QC762_512240
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_HPS5
Other DBs
NCBI-GeneID: 87911531
NCBI-ProteinID: XP_062742295
LinkDB
Position
5:complement(2651189..2652926)
AA seq 544 aa
MADFNEYPPDLPVRDALILRNHTAAESAHAVVPYSGTDLARPQLGPANPFKGSDEPSVGD
KRKNVLTGRAEETFISEHTFRAKHRAVERDGGPEREFVGSKRMKEMAREVKRGREAKGSA
TVADGEGAYLGPWAKYKNTRWEEVEVEEGGELGSDEEEVEEEVVGSGTVIRAPEVNLQRR
EEVEKQGEETSVFEGGEEFDYLGRGYLHVPQDLDISLTKEVGSVTNFIPKKVVHVWRPHG
RQGSGSAVTSLRLFPGSSHLGLSGGADGLVKIWDVYRNREVLRSYKGHNKAVTDLDFVRA
GGAAGRRFLSGGFDRKVRLWDTETGQCVQRFNVGKTPHVVKFNPGSENGHEFLAGLSDNR
IVQYDSRAGNETVQEYDHHLGAINTLEFIDDSRRFMSTSDDRSLRVWEYGIPVEIKTISE
PDMFALTKSTQHPSGKYVLYQCSDNSIVAYSSGSDKFRQNRKKAWRGHNTAGSAIGITCS
PDGQFVASGDTGGSVCFWDFKTCKLYSKLTADSSGGAINCVAWSEQETSKVFTAGAKGEI
RLWD
NT seq 1635 nt   +upstreamnt  +downstreamnt
atggccgactttaacgaatacccccccgatctccccgtccgcgacgcactgattctccgg
aaccacaccgctgctgaatccgcccacgcggtggtgccgtattctgggacggacctcgcg
agaccacagctcggtccagcgaaccccttcaaaggaagcgatgagccgagcgtaggggac
aagcgaaaaaacgtcctcactgggcgggcggaggagacgtttattagtgagcataccttt
cgggcgaaacaccgggcggtggaacgggatggggggccggagagggagtttgttgggagt
aagaggatgaaggagatggcgagggaggtgaagaggggacgggaggcgaaggggagtgcg
acggttgctgatggggagggagcttatttgggaccgtgggcgaaatataagaatacgagg
tgggaggaggtggaagtggaagaagggggggagttggggagtgatgaggaggaggttgag
gaggaggtggtggggagtgggactgtgatcagggcgccggaggttaatttgcaaaggagg
gaggaggtggagaagcaaggggaggagacgagtgtttttgaggggggggaggagtttgat
tatttgggacgggggtatttgcatgtaccccaggatttggatatttctttgacgaaggag
gtgggaagtgtcacgaattttattccgaaaaaggtggtgcatgtctggaggccgcatggg
aggcaggggagtgggagtgcggttaccagtcttaggttgtttcctgggtcgtcacatctc
gggttgtcggggggcgcggatgggttggtcaagatttgggatgtgtatcggaatcgggag
gtgttgaggagttacaaggggcataataaggctgtgacggatttggactttgtgagggcg
gggggagcggcggggaggaggtttttgagtggggggtttgataggaaggtgaggttgtgg
gatacagagaccgggcagtgcgtgcagaggtttaatgtgggcaagacgccgcatgtggtc
aagtttaatcctgggtcggagaatgggcatgagtttttggcggggttgagtgacaatcgg
attgtgcagtatgattcgagggcggggaacgagacggtgcaggagtatgatcaccatctg
ggggcgattaacacgctcgagtttatcgatgatagcaggaggttcatgtcgacgtcggat
gatcggtcgttgagggtttgggagtatgggattccggtggagatcaagaccattagtgaa
cccgacatgttcgccctcaccaagtcaacccagcaccccagcggcaagtatgtgctgtat
cagtgcagcgacaattccatcgtcgcctactcgtcaggctcggacaagttccgccagaac
aggaagaaggcatggagggggcacaacacggccggtagcgccattggcattacgtgcagt
cctgatgggcagtttgtggcgtctggtgacactggtggtagcgtctgcttctgggatttc
aagacttgcaagctgtacagcaagttgacggctgacagttcgggaggtgctatcaattgt
gttgcttggtcggagcaggagactagcaaggtgtttactgctggtgccaagggggagatt
agactttgggattaa

DBGET integrated database retrieval system