Podospora pseudocomata: QC762_512960
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Entry
QC762_512960 CDS
T09797
Symbol
VPS4
Name
(RefSeq) Vacuolar protein sorting-associated protein 4
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03250
Viral life cycle - HIV-1
ppsd03272
Virion - Hepatitis viruses
ppsd04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
QC762_512960 (VPS4)
03272 Virion - Hepatitis viruses
QC762_512960 (VPS4)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
QC762_512960 (VPS4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppsd04131
]
QC762_512960 (VPS4)
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
QC762_512960 (VPS4)
Membrane trafficking [BR:
ppsd04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
QC762_512960 (VPS4)
DNA repair and recombination proteins [BR:
ppsd03400
]
Eukaryotic type
Check point factors
Other check point factors
QC762_512960 (VPS4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Vps4_C
MIT
AAA_lid_3
AAA_16
RuvB_N
AAA_5
RNA_helicase
TIP49
AAA_14
DUF815
AAA_22
IstB_IS21
AAA_25
AAA_17
AAA_2
NPHP3_N
AAA_33
AAA_24
AAA_18
nSTAND3
Parvo_NS1
AAA_7
Mg_chelatase
NACHT
AAA_28
ATPase_2
PhoH
Torsin
ABC_tran
AFG1_ATPase
bpMoxR
Motif
Other DBs
NCBI-GeneID:
87911591
NCBI-ProteinID:
XP_062741808
LinkDB
All DBs
Position
5:1203693..1206049
Genome browser
AA seq
438 aa
AA seq
DB search
MSNTDFLDRAIKQVRTAIDADNAAQYEKAYQLYYASLELFMLALKWEKNPKSKDMIRAKT
AEYMDRAEKLKAHLADAESKKKKPGLVGANGSSTAGTAKGKEAGEDGAPELDEDSKKLRS
ALAGAILQERPNVSWDDVAGLEQAKEALKEAVLLPIKFPHLFQGKRQPWKGILLYGPPGT
GKSYLAKAVATEAKSTFFSISSSDLVSKWMGESERLVKQLFAMARENKPSIIFIDEIDAL
CGPRGEGESEASRRIKTEMLVQMDGVGKDSKGVLILGATNIPWQLDAAIRRRFQRRVHIS
LPDLAARTKMFSIAIGDTKTALKPEDFRELARASEGYSGSDISIVVQDALMQPVRKIQQA
THFKKVMVDGKKRMTPCSPGDPEAVEMTWEGVEGEELLEPMVEKKDFLRAIKSSRPTVSQ
VDLERNEEWTKEFGSEGA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacaccgacttcctcgaccgcgccatcaaacaagtccgcaccgccatcgacgcc
gacaacgcagcccaatatgaaaaagcctaccagctctactacgcctccctcgagctcttc
atgctggccctcaagtgggaaaagaacccaaagtccaaagacatgatccgcgccaaaacg
gccgagtacatggaccgcgccgaaaagctcaaagcccacctcgccgacgccgagtccaag
aagaaaaaacccggcctcgtcggcgcgaacggctcctccaccgccgggacggcaaaaggg
aaggaggcgggggaggatggtgcgcctgaactagatgaggatagcaagaagctgaggtcg
gcgctggcgggcgccatcttgcaggagagacctaatgtcagctgggatgacgttgctggg
ttggaacaggcgaaggaggcgttgaaggaggcggttttgttgccgatcaagtttcctcat
ttgtttcaggggaagaggcagccttggaaggggattttgctctatgggccgccggggacg
ggaaagagttatttggccaaggcggtggctaccgaggcgaagagtacgttttttagtatt
agcagttctgatttggtgagtaagtggatgggtgagagtgagaggttagtcaagcaactg
ttcgccatggcccgcgagaacaaaccatccatcatcttcattgacgaaatcgacgccctc
tgcggcccccgcggcgaaggcgagtcggaagcctcccggagaataaaaacggagatgctc
gtccagatggacggtgtaggcaaagacagcaagggggttctcatcctcggcgcgaccaac
atcccttggcaactcgacgctgctatccgccgtcgtttccagagacgagtccacatcagt
ctaccagatctggccgcgaggacaaaaatgtttagcattgccattggggacacaaagacg
gcgctcaaacccgaagattttagagagctggcgagggcgtcggagggttactcgggttct
gacatcagcatcgttgttcaagacgcgctgatgcagccggtcagaaagattcagcaggcg
acgcacttcaagaaggtgatggtggacggcaagaagaggatgacgccctgctcgcccggg
gatccggaggcggtggagatgacgtgggagggggtggaaggggaggagctgttggagccc
atggtggagaagaaggactttttgagggctatcaagtcgagtaggccgacggtgtcgcag
gtggacttggagaggaacgaggagtggacgaaggagtttggaagtgagggtgcgtag
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