KEGG   Podospora pseudocomata: QC762_600730
Entry
QC762_600730      CDS       T09797                                 
Name
(RefSeq) hypothetical protein
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
ppsd  Podospora pseudocomata
Pathway
ppsd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ppsd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    QC762_600730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppsd03400]
    QC762_600730
DNA repair and recombination proteins [BR:ppsd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      QC762_600730
SSDB
Motif
Pfam: BHD_3 Rad4 BHD_2 BHD_1 Transglut_core
Other DBs
NCBI-GeneID: 87911671
NCBI-ProteinID: XP_062740726
LinkDB
Position
6:2188075..2191170
AA seq 1031 aa
MPPHIPLKRLRSPSPEPPPKKRQSSTTSKKKAIAPPRKPTLFDDLDAGSTPRSSTKTSLL
EIEASDDDTSSLTSLSDADFEDVPLDGPGTKRRKLSQPSSTEDEDIEFEDVPTPTAPAPD
VAIPSQDLDLTLVRDTRINLAAAMGKKGPSKLERKIRIAAHGVHVQLLLWHNALRNAWCS
DEEVMAIMISHLPPRLWEEVDRWRRSSGLEVQVEEPPPKGKTAGKGKGEGKATEKGREWG
AAAKHLEKGAVDMSHGDPLFRLMKVLTSWWKQRFKITAPGLRKQGYMSLERLDRITKAFK
QTNGDDQDRFGEKIDGLEGFRKRAQSCAGSRDVGAQLFTALLRGLGIEARLVASLQPLGF
GWNKLEEADPEKEEHYLSESNPEKPPVPATKLPPPRAKKTPAKPPPKTARSTRHSQKPPP
EPSSDLESLSDSSNDLIIPPSPSPPPTSPTKTPKKVYDQDLEYPHYWLEALSPATHKYLP
LDPLKPLLATNPDLLSHFEPRGSKADRARQVMAYIIAHSPDGTAKDVTIRYLKGQQLPGR
TKGSRLPPEKIPVYDKNGKVKRYEEYDWFKRVMSSYIRGRDPSHPLTEADTLENETDLKP
AERVDKVVKEGEETLQYYKQSKEFVLERHLKREEALLPTAKPVKMFVQNKNKKPGAQGEA
VYSRRDVVQVKSAETWHKQGRAPKQGEAPLKKVPYRAATTNRRREIAEAELATGAKVLQG
LYSHAQTDWIIPPPIQDGKIPKNEYGNIDLFVPTMCPEGAVHVPFRGAGRVARRLGIDYA
EAVVDFEFGHRMAVPVIQGVVVAEEFYEKMVEELERDEAERRRKEDEKRRKRALGMWRRM
LMGLRIVERLEGHYGNVKEGEQEGGAGQIGGDVHMAGEGAGGFEAEEDQMAGGFLPEGHE
ADDLGGGGFFAEGQEEDEQHGRTTSGYFPTVHSDNDDDDGEDVLEIDHGDVSGVLSEAVS
PEPASLSPSPRPEIEETKAPPRRSARRKAPVKPKAAAAGGKRGRRRRNVASTSSEEEEIE
EGYEVFGSGED
NT seq 3096 nt   +upstreamnt  +downstreamnt
atgccaccacacatccccctcaaacgactccgctctccctcccctgaaccaccacccaaa
aagcggcagtcttcaacaacttcaaagaagaaagccatcgcccccccccgtaaaccaacc
ctcttcgacgacctcgacgccggctccaccccccgttcctcaaccaagacctccctcctc
gaaattgaagctagcgatgacgacaccagctccttgacgtccctctccgacgccgatttc
gaggacgtcccgctggatggtcctggcacaaaacgtcgaaaactctcccaaccctcctct
acagaagatgaagacatcgaattcgaagatgtccccacgcctactgcgccagctcccgat
gttgctatccccagtcaggacctcgatctgacgttggtacgggataccagaatcaatctc
gctgccgcgatggggaagaaggggccctcgaagcttgaaagaaagatcaggatagctgca
catggtgtccatgtccagttgttactatggcacaatgcgctgaggaatgcgtggtgtagt
gacgaggaggtgatggcgatcatgatatcgcatttaccgcctaggctgtgggaggaggtg
gatagatggaggaggagcagtgggttggaggtacaggtggaggagccaccaccaaagggg
aagacagctgggaaggggaaaggcgaggggaaagcgacagagaaagggagggaatgggga
gcggcagctaagcatcttgaaaaaggagctgtcgatatgtcgcatggagatccattattc
agactgatgaaggtcctcacatcatggtggaaacaacggttcaagatcacggcaccaggg
ctgcgcaagcaggggtacatgtccctagaacgactcgacagaatcaccaaggctttcaag
caaacgaacggtgacgatcaagaccgcttcggggagaagattgatggtttagaaggcttc
agaaagcgcgcacagtcgtgtgcaggcagccgcgatgttggtgcccagttattcaccgct
ctactacgaggactgggaattgaagctagattggtggccagtctacaacccttgggattc
gggtggaacaaactcgaggaagccgaccctgaaaaggaagagcattacctctcggaaagc
aatcctgaaaaacctcccgtgccagccaccaaactaccaccacccagagcaaagaaaaca
cctgccaaaccaccccccaaaacagcccgatcaacccggcattcccaaaaaccacccccc
gaaccctcctccgatctcgaatccctctccgactcctccaacgatctgataatcccccct
tccccttccccacctccaacctccccaaccaagacccccaaaaaggtgtacgatcaagac
ttggaatacccccactactggctcgaagccctctcccccgccacccacaaatacctcccc
ctcgaccccctcaaacccctcctagccaccaaccccgaccttttgtctcactttgaaccc
cgcggctccaaagccgaccgcgcccgccaggtaatggcatacatcatcgcccactccccc
gacggcacagccaaagacgtcaccatccgctacctcaaagggcaacaactcccaggacga
accaaaggcagccggctaccccccgaaaaaattcccgtgtacgacaagaacggaaaagtg
aaaagatacgaggagtatgactggttcaagagggtgatgagctcctacattcgcggccgt
gacccctcccacccattgacagaagcagacaccctcgaaaacgagaccgatctcaaaccc
gccgagcgggtggacaaggtggtcaaagaaggagaggagacactgcagtactacaagcaa
tccaaagagtttgtgttggaacgccacctcaagagagaagaagcgctcctgccgaccgcg
aaaccggtcaagatgtttgttcaaaacaagaacaagaaaccgggtgcacaaggcgaggcg
gtctacagccgtagagacgtcgtccaagtcaagagcgcagaaacatggcataaacaggga
cgtgcccctaaacaaggggaggcccccctgaaaaaggtgccctatcgagcagcgactaca
aatcggagaagggagattgcagaggcggagttggctacgggagcaaaggttttgcagggg
ttgtatagtcacgcgcagacagactggatcataccgccgccgattcaagatggaaagata
ccaaagaatgagtatgggaatattgatttgtttgtcccgaccatgtgccccgagggtgcg
gttcatgttcctttccggggggcggggagggttgcaaggagattggggatagattatgcg
gaggcggtggtggattttgagtttgggcatcggatggctgtgccggttattcagggggtt
gttgtggcggaggagttttatgagaaaatggtggaggagctggagagggatgaggcggag
aggaggaggaaggaggatgagaagaggaggaagagggcgctggggatgtggaggaggatg
ttgatggggttgaggattgtggaacggttggaggggcactatgggaatgtcaaggagggg
gagcaggaagggggtgcgggacaaatcggtggtgacgtgcatatggcgggagagggggcg
ggagggtttgaggcggaggaggatcagatggcggggggattcctgccggagggacatgag
gcggacgacttgggcggcgggggcttttttgccgagggccaggaggaggacgagcaacat
gggcgcacaacttcagggtacttccctaccgtccactccgataacgacgacgatgacggg
gaggatgtgctcgagattgatcatggtgatgtgagcggtgtgttgagcgaggcggtgagt
ccggagccagcgtcactgtcgccatcgcccaggccagaaatcgaagaaaccaaggcgcca
ccgaggaggagcgcaaggcggaaggcgccggtcaagcccaaagccgcggcggctggtgga
aagcgaggaaggaggaggcgaaacgttgcgtcaacgagctccgaggaggaggaaatcgag
gagggatacgaggtttttggttctggggaggattag

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