Podospora pseudocomata: QC762_600730
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Entry
QC762_600730 CDS
T09797
Name
(RefSeq) hypothetical protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QC762_600730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
QC762_600730
DNA repair and recombination proteins [BR:
ppsd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
QC762_600730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_2
BHD_1
Transglut_core
Motif
Other DBs
NCBI-GeneID:
87911671
NCBI-ProteinID:
XP_062740726
LinkDB
All DBs
Position
6:2188075..2191170
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AA seq
1031 aa
AA seq
DB search
MPPHIPLKRLRSPSPEPPPKKRQSSTTSKKKAIAPPRKPTLFDDLDAGSTPRSSTKTSLL
EIEASDDDTSSLTSLSDADFEDVPLDGPGTKRRKLSQPSSTEDEDIEFEDVPTPTAPAPD
VAIPSQDLDLTLVRDTRINLAAAMGKKGPSKLERKIRIAAHGVHVQLLLWHNALRNAWCS
DEEVMAIMISHLPPRLWEEVDRWRRSSGLEVQVEEPPPKGKTAGKGKGEGKATEKGREWG
AAAKHLEKGAVDMSHGDPLFRLMKVLTSWWKQRFKITAPGLRKQGYMSLERLDRITKAFK
QTNGDDQDRFGEKIDGLEGFRKRAQSCAGSRDVGAQLFTALLRGLGIEARLVASLQPLGF
GWNKLEEADPEKEEHYLSESNPEKPPVPATKLPPPRAKKTPAKPPPKTARSTRHSQKPPP
EPSSDLESLSDSSNDLIIPPSPSPPPTSPTKTPKKVYDQDLEYPHYWLEALSPATHKYLP
LDPLKPLLATNPDLLSHFEPRGSKADRARQVMAYIIAHSPDGTAKDVTIRYLKGQQLPGR
TKGSRLPPEKIPVYDKNGKVKRYEEYDWFKRVMSSYIRGRDPSHPLTEADTLENETDLKP
AERVDKVVKEGEETLQYYKQSKEFVLERHLKREEALLPTAKPVKMFVQNKNKKPGAQGEA
VYSRRDVVQVKSAETWHKQGRAPKQGEAPLKKVPYRAATTNRRREIAEAELATGAKVLQG
LYSHAQTDWIIPPPIQDGKIPKNEYGNIDLFVPTMCPEGAVHVPFRGAGRVARRLGIDYA
EAVVDFEFGHRMAVPVIQGVVVAEEFYEKMVEELERDEAERRRKEDEKRRKRALGMWRRM
LMGLRIVERLEGHYGNVKEGEQEGGAGQIGGDVHMAGEGAGGFEAEEDQMAGGFLPEGHE
ADDLGGGGFFAEGQEEDEQHGRTTSGYFPTVHSDNDDDDGEDVLEIDHGDVSGVLSEAVS
PEPASLSPSPRPEIEETKAPPRRSARRKAPVKPKAAAAGGKRGRRRRNVASTSSEEEEIE
EGYEVFGSGED
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgccaccacacatccccctcaaacgactccgctctccctcccctgaaccaccacccaaa
aagcggcagtcttcaacaacttcaaagaagaaagccatcgcccccccccgtaaaccaacc
ctcttcgacgacctcgacgccggctccaccccccgttcctcaaccaagacctccctcctc
gaaattgaagctagcgatgacgacaccagctccttgacgtccctctccgacgccgatttc
gaggacgtcccgctggatggtcctggcacaaaacgtcgaaaactctcccaaccctcctct
acagaagatgaagacatcgaattcgaagatgtccccacgcctactgcgccagctcccgat
gttgctatccccagtcaggacctcgatctgacgttggtacgggataccagaatcaatctc
gctgccgcgatggggaagaaggggccctcgaagcttgaaagaaagatcaggatagctgca
catggtgtccatgtccagttgttactatggcacaatgcgctgaggaatgcgtggtgtagt
gacgaggaggtgatggcgatcatgatatcgcatttaccgcctaggctgtgggaggaggtg
gatagatggaggaggagcagtgggttggaggtacaggtggaggagccaccaccaaagggg
aagacagctgggaaggggaaaggcgaggggaaagcgacagagaaagggagggaatgggga
gcggcagctaagcatcttgaaaaaggagctgtcgatatgtcgcatggagatccattattc
agactgatgaaggtcctcacatcatggtggaaacaacggttcaagatcacggcaccaggg
ctgcgcaagcaggggtacatgtccctagaacgactcgacagaatcaccaaggctttcaag
caaacgaacggtgacgatcaagaccgcttcggggagaagattgatggtttagaaggcttc
agaaagcgcgcacagtcgtgtgcaggcagccgcgatgttggtgcccagttattcaccgct
ctactacgaggactgggaattgaagctagattggtggccagtctacaacccttgggattc
gggtggaacaaactcgaggaagccgaccctgaaaaggaagagcattacctctcggaaagc
aatcctgaaaaacctcccgtgccagccaccaaactaccaccacccagagcaaagaaaaca
cctgccaaaccaccccccaaaacagcccgatcaacccggcattcccaaaaaccacccccc
gaaccctcctccgatctcgaatccctctccgactcctccaacgatctgataatcccccct
tccccttccccacctccaacctccccaaccaagacccccaaaaaggtgtacgatcaagac
ttggaatacccccactactggctcgaagccctctcccccgccacccacaaatacctcccc
ctcgaccccctcaaacccctcctagccaccaaccccgaccttttgtctcactttgaaccc
cgcggctccaaagccgaccgcgcccgccaggtaatggcatacatcatcgcccactccccc
gacggcacagccaaagacgtcaccatccgctacctcaaagggcaacaactcccaggacga
accaaaggcagccggctaccccccgaaaaaattcccgtgtacgacaagaacggaaaagtg
aaaagatacgaggagtatgactggttcaagagggtgatgagctcctacattcgcggccgt
gacccctcccacccattgacagaagcagacaccctcgaaaacgagaccgatctcaaaccc
gccgagcgggtggacaaggtggtcaaagaaggagaggagacactgcagtactacaagcaa
tccaaagagtttgtgttggaacgccacctcaagagagaagaagcgctcctgccgaccgcg
aaaccggtcaagatgtttgttcaaaacaagaacaagaaaccgggtgcacaaggcgaggcg
gtctacagccgtagagacgtcgtccaagtcaagagcgcagaaacatggcataaacaggga
cgtgcccctaaacaaggggaggcccccctgaaaaaggtgccctatcgagcagcgactaca
aatcggagaagggagattgcagaggcggagttggctacgggagcaaaggttttgcagggg
ttgtatagtcacgcgcagacagactggatcataccgccgccgattcaagatggaaagata
ccaaagaatgagtatgggaatattgatttgtttgtcccgaccatgtgccccgagggtgcg
gttcatgttcctttccggggggcggggagggttgcaaggagattggggatagattatgcg
gaggcggtggtggattttgagtttgggcatcggatggctgtgccggttattcagggggtt
gttgtggcggaggagttttatgagaaaatggtggaggagctggagagggatgaggcggag
aggaggaggaaggaggatgagaagaggaggaagagggcgctggggatgtggaggaggatg
ttgatggggttgaggattgtggaacggttggaggggcactatgggaatgtcaaggagggg
gagcaggaagggggtgcgggacaaatcggtggtgacgtgcatatggcgggagagggggcg
ggagggtttgaggcggaggaggatcagatggcggggggattcctgccggagggacatgag
gcggacgacttgggcggcgggggcttttttgccgagggccaggaggaggacgagcaacat
gggcgcacaacttcagggtacttccctaccgtccactccgataacgacgacgatgacggg
gaggatgtgctcgagattgatcatggtgatgtgagcggtgtgttgagcgaggcggtgagt
ccggagccagcgtcactgtcgccatcgcccaggccagaaatcgaagaaaccaaggcgcca
ccgaggaggagcgcaaggcggaaggcgccggtcaagcccaaagccgcggcggctggtgga
aagcgaggaaggaggaggcgaaacgttgcgtcaacgagctccgaggaggaggaaatcgag
gagggatacgaggtttttggttctggggaggattag
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