Podospora pseudocomata: QC762_601350
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Entry
QC762_601350 CDS
T09797
Symbol
ssr2
Name
(RefSeq) SWI/SNF and RSC complex subunit Ssr2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
QC762_601350 (ssr2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsd03021
]
QC762_601350 (ssr2)
03036 Chromosome and associated proteins [BR:
ppsd03036
]
QC762_601350 (ssr2)
Transcription machinery [BR:
ppsd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
QC762_601350 (ssr2)
Chromosome and associated proteins [BR:
ppsd03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
QC762_601350 (ssr2)
PBAF complex
QC762_601350 (ssr2)
GBAF(ncBAF) complex
QC762_601350 (ssr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
SANT_DAMP1_like
DUF3439
ZZ
Motif
Other DBs
NCBI-GeneID:
87911741
NCBI-ProteinID:
XP_062740655
LinkDB
All DBs
Position
6:1983742..1987191
Genome browser
AA seq
686 aa
AA seq
DB search
MDESMVSYGTPTNGASPGANPILSQPPLPDVNDQNEDVQMGDGPEPTIKQDSTTPAPGAS
SDNPLDAPDRPPAESTAREDEEMGDASKSSADQADGAAGNEGTGEVKTKESVENAAREHL
ISQTHAIVLPSYSAWFDMNTIHSIERKALPEFFNNRNRSKTPAVYKDYRDFMINAYRLNP
VEYLTITACRRNLAGDVCAIMRVHSFLEQWGLINYQVDTEQRPSHVGPPFTGHFKIICDT
PRGLQPWQPAADPATVEGRPNKDTEVKASATPAPKSELNLEVGRNIYEANAKNTKLTKTE
SKTNGETPATNGVSGTDELTKTPIIRVNCYNCGTDCTRIYYHSSQADPNSKAKYDLCPSC
YLEGRLPGNQTSAHYTRMENPTYSSILDRDAPWSDAETLRLLEGLERFDDDWGEIADYVG
TRTREECVLKFLQLDIEDKYLESEKVDAPVGLQMLGSHGGQLPFSQTDNPVMSVVGFLAS
LADPASTAAAAGKSAELLKQNLRSKLDAVPEDAEANGKGKEKEGESMELDIRQEVTTTTT
TTTTTTTKTSALANIPLAAIGARAGGLASHEEREMTRLVSACVNITLEKDELKLKYFDEM
ESILQSERRELERARQQLFLDRLSLKRRVREVEQGLKEAVATGGEQGIRMVQELGLDGER
VTFDAPAPAGSVQPLSVDGQLKRYES
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggatgagagcatggttagctacgggacacccaccaacggtgcatcccctggcgcaaac
ccaattctctcgcaaccccctctcccggatgtcaatgaccagaacgaagatgtacagatg
ggtgatggcccagagccaacaatcaaacaggacagcaccacgcctgcaccaggcgcctca
tccgataatcccttggacgcgcctgatcgtccccctgcggaatcgacagcccgcgaagat
gaagagatgggcgacgcctctaagagcagcgctgatcaagccgatggcgctgccgggaac
gaggggaccggtgaggtcaagaccaaggagtccgtcgagaatgccgccagagaacatctg
atttcacaaacccatgccatcgtcctccccagctacagcgcctggttcgacatgaacacc
atccacagcattgagaggaaagcgctgcccgagttctttaacaacagaaatcgaagcaag
acacctgctgtctacaaggattaccgtgatttcatgatcaatgcctacaggttaaaccca
gtcgagtatctcaccatcactgcctgccgtcgcaacctggccggtgatgtctgcgccatc
atgagagtccactctttcctcgagcagtgggggttgatcaactaccaggtcgacacagaa
cagcgcccatcgcacgttggaccaccgttcactggccacttcaagatcatctgcgatact
cctcgcggccttcagccatggcaacccgccgcagaccctgccaccgttgaggggcgtcct
aacaaggacacagaagtcaaggcgagcgctacacccgcgccaaagtctgagctcaacctg
gaagtcggccgcaacatctacgaggccaacgctaagaacaccaagctcaccaagaccgag
agcaagaccaatggagagaccccagcgaccaacggtgtatccgggaccgacgagctcacc
aagacgcccatcatcagagtcaactgctacaactgcggcaccgactgcacgcgcatctac
taccacagctcccaggccgatcccaattcgaaggccaagtacgacctttgcccaagctgt
tacctcgagggccgcctcccaggaaatcaaaccagtgcccactacacccggatggagaac
ccaacatactcttccattctcgacagggacgcaccatggagcgatgctgagacactcaga
ctgttggagggtcttgagaggttcgacgacgactggggtgagatcgctgactatgttggg
acacggaccagggaggagtgcgtgctcaagttcctccagcttgatatcgaggacaagtac
ttggagtcggagaaggtggatgcaccggttggcctgcaaatgctgggcagtcatggcggt
cagctaccattcagccagaccgacaacccggtcatgtcggtggtgggcttcctggccagc
cttgcggacccggccagtactgcggctgctgctggcaagtcggccgaactgctgaagcag
aatcttcgcagcaagctcgatgccgttcccgaggatgccgaggccaatggcaagggcaag
gagaaggagggcgagtcgatggagctggatatcaggcaagaggttaccaccaccaccacc
acgacaacgaccacaaccaccaaaaccagcgcgctggccaacattcctcttgcggccatt
ggtgccagagccggcggtcttgcgtctcacgaggagcgggagatgacccgtctcgtctcc
gcttgcgtgaacatcacgctggaaaaggacgagctcaagctcaagtactttgacgagatg
gagtcgatcctgcagtcggaaagacgtgagctggagagggcgaggcagcaactgttcctc
gatagactctcgctcaagcgccgcgtccgcgaggttgagcaggggctcaaggaggctgtt
gccacggggggtgagcagggcatccgcatggtgcaagagctggggcttgatggggaacgg
gtgacgtttgacgcgccggcgccggctgggtcggtgcagccgcttagtgttgacgggcag
ctcaagagatatgagtcttag
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