Podospora pseudocomata: QC762_602940
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Entry
QC762_602940 CDS
T09797
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03430
Mismatch repair
ppsd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
QC762_602940 (mlh1)
03460 Fanconi anemia pathway
QC762_602940 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
QC762_602940 (mlh1)
DNA repair and recombination proteins [BR:
ppsd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
QC762_602940 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
87911889
NCBI-ProteinID:
XP_062740499
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Position
6:1458450..1461342
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AA seq
747 aa
AA seq
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MSDAMEVDSEVDGPRGAKRKADALDDNTPQRRIKPLDEDVINKIAAGEIIVAPVNALKEL
MENSVDAGSTTVDVSVKEGGLKLLQITDNGSGIEKEDLPILCQRFTTSKLQKFEDLQTIA
TYGFRGEALASISHIAHLTVTTKTRDSECAWRGHYGSGVLVPAKPGQSPDPKPVSGRQGT
QITVEDLFFNVPTRRRAFRSPANEYNKILDMVGRYAIHCTGVGFTCKKHGESSKGISVSP
TAPCLDRIRQIYGASVANELTEFETKDDQWGFKAKGLATNANYRTKKTTLLLFINNRCVE
STNIRKALEQTYASFLPKNGHPFVYLSLEIDPRRVDVNVHPTKQEVNFLNEDETIQAVCE
HLRSKLAEVDASRTFLTQTLLPASSRAASSIQLPPAPSAPSMATPASSRRAPPRSDTSLV
RTDTNLRKITSMLPPVRPGGSTPSRPGPEPMEFDTAPEPRQPTSCHLHSIKELRAQVREE
MHNELTDIFANHTFVGIVDERRRLAAIQAGVKLYMIDYGRVCYEYFYQSGLTDFGNFGVV
QFQPPLDIRNLLSSSPNLLTEYEEEQDEDEEEDIDPEEKAEIIEAVVEKLIERREMLREY
FSLEVSPAGELCSVPLLVNGYEPPLTKLPGFLVRLGPCVNWTEEKACFESFLKELAGFYV
PERLPLKKVAKEENDGTLDSADDREEDSKGEEEKRIDARRRNVKWALEHVLFPAFKARLV
GTKGIMEAGGVVEVADLKGLYRVFERC
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgcaatggaggtggattccgaggtggatgggcctcgcggtgccaagaggaag
gctgatgctcttgacgacaataccccccaacgtcgaatcaagcccctggacgaagatgtc
atcaacaaaattgctgccggggaaatcatcgtggctcccgtgaacgccttgaaggagttg
atggagaactctgtcgacgcgggatcaaccaccgtagatgtttcggtgaaagagggaggc
ttgaagttactacagatcacagataatggctctggcatcgagaaagaagatctgccaata
ttgtgtcaacgtttcacgacgtccaagctccaaaagtttgaagacctccagaccatcgct
acctatggtttcagaggcgaggccttggccagcatcagccacattgcccatcttaccgtg
accacgaaaacacgggactcagagtgtgcctggaggggtcactatggcagcggagtgtta
gtcccagctaaacctggccagtctcctgacccaaagcccgtatctggccgacaaggcacc
cagattaccgttgaagatttgttcttcaacgttcctacaagacggcgtgcgtttcgatca
ccagccaacgagtacaacaaaatactggacatggttgggagatatgctatccattgtacc
ggtgtggggttcacatgcaagaaacatggcgaatcatccaaaggcatctccgtatctcca
acagcgccatgtctggacaggatcagacaaatctacggcgcaagcgttgctaacgagctc
actgaattcgagacgaaagatgatcaatgggggttcaaggcaaagggacttgccaccaac
gccaactacagaaccaaaaaaactaccttgctgttgttcattaataacagatgtgttgag
tcaaccaacatccgcaaggcactcgagcagacctatgcgtcattcctccccaaaaacggt
catccgtttgtatacctcagccttgagatagacccacgccgggtcgacgtcaacgtccac
ccaaccaaacaagaagtcaacttcttgaacgaagacgaaaccattcaagcagtatgcgaa
cacttgcgctccaaactagccgaggtagatgccagtaggaccttcctcacccagaccctc
ctcccagcaagcagccgggctgcctcctccattcaactgccaccagccccctctgcaccc
tctatggcgaccccggcttccagtcgaagagcccctcctagaagcgacaccagcctcgtc
aggacagacacaaaccttcggaaaatcacgagtatgctcccccctgtcagaccaggcggc
agcacgccatcccgcccaggcccagagcccatggaatttgacacggcacccgagcctcgt
cagcccacatcttgtcatttgcacagcatcaaagagctccgcgcacaagtccgcgaggag
atgcacaacgagctcactgatatctttgccaaccacacttttgtcggaattgttgacgag
cgccgcaggctggctgctatacaagctggcgttaagctctacatgattgactacggccgg
gtgtgttacgaatacttttaccagtcggggctaacagatttcggtaattttggtgtggta
caatttcagcctcctcttgacattcgcaacctactgtcatcgtccccaaatctcctcact
gaatatgaagaagagcaggatgaggatgaggaagaggacattgaccccgaagaaaaggcc
gagatcatcgaggctgtggtggagaagttgattgagagaagagaaatgttgcgggagtac
tttagtctggaagtatctcccgcgggagagttgtgcagtgtgccgctgttggtcaacggg
tatgagccacctttgacaaagttgccagggttcttggtgaggttggggccttgtgtcaac
tggacggaggagaaggcttgttttgagagcttcctgaaggagctggctggattttatgta
ccagagaggttgccgctgaagaaggtagccaaagaggagaatgatgggacgctggatagt
gctgatgacagggaagaagatagtaaaggggaagaggaaaagaggattgatgcgaggagg
agaaatgtgaaatgggcgttggagcatgtgcttttcccggcgtttaaggcgaggctggtc
gggacgaaaggcatcatggaggctgggggtgtggtggaggtggcggatttgaaagggctg
tacagagtctttgaaaggtgttag
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