Podospora pseudocomata: QC762_603090
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Entry
QC762_603090 CDS
T09797
Symbol
DBP10
Name
(RefSeq) ATP-dependent RNA helicase dbp10
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
ppsd
Podospora pseudocomata
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppsd03009
]
QC762_603090 (DBP10)
Enzymes [BR:
ppsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QC762_603090 (DBP10)
Ribosome biogenesis [BR:
ppsd03009
]
Eukaryotic type
Pre-60S particles
Helicases
QC762_603090 (DBP10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
KH_SLS1_1
Motif
Other DBs
NCBI-GeneID:
87911904
NCBI-ProteinID:
XP_062740480
LinkDB
All DBs
Position
6:complement(1406998..1410561)
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AA seq
924 aa
AA seq
DB search
MKRRAASPTPSEHEVDIAGSLFADESDGDFEVVKKGGEADFDLDFGDLLTAGDGDSNAED
DEDFIATAQRKSNRKSSNVQGKSVKKGGGFQAMGLNANLLRAITKKGFSVPTPIQRKTIP
LVLERRDVVGMARTGSGKTAAFVIPMIERLKGHSPKVGARALILSPSRELALQTLKVVKE
LGRGTDLKTILLVGGDSLEEQFAQMATNPDIVIATPGRFLHLKVEMNLNLSSIKYVVFDE
ADRLFEMGFAEQLTEILHALPSSRQTLLFSATLPSSLVEFARAGLQEPSLVRLDAETKVS
PDMESAFFSVKGGEKEGALLHILHDIIKMPMGTPEGAPKDEADPNNSRGKRKRGSDRLSF
KEKPTAHSTIIFTATKHHVEYIAHLLRHAGFAVSYIYGSLDQTARKIQVDDFRRGRTNIL
VVTDVAARGIDIPVLANVINYDFPPQPKVFVHRVGRTARAGQRGWAYALVRESDLPYLID
LQLFLGRRLVMGKDGQDPSFAQDVVLGALKRSELENQTEWVNKVLNEEGDISALRGVTLK
AEKLYMRTRNSASSSSAKRAREIINSKGWTQLHPLFGVEAINAEEARDNLLSKISLFKPQ
ETVFEIGPQGKSHRNKAAEVMRSFRTKVAPRRITKGENDSDFAMSDGEGPKAGSEFDSDS
DDEPAKREDVSESEQEEDDSDSEMEVTVISSKSSKKQKGGDPIASFQDPEIFMSYTPRTT
SAAEEKAYGVHSGGVNSSHFVTAARDAAMDLTNDDGAKAFGLPTRSKLRWDKRHSKYVAR
ANDDDGSKGVKMIRGESGVKIAASFQSGRFDKWKKSNRIGRLPGVGELEKPGLARLANGP
GHQEGGTRYKHKQEKAPKEADKFRDDYHVRKKRVAEAKEKRIGKFKDGEGSKRELKNATD
IRKARVIAEKKREKNARPSKRPRR
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgaagagacgcgctgcgtccccgactccgtcggagcacgaggtcgatattgcggggtcc
ctgtttgccgacgagagtgatggtgattttgaggttgtcaagaagggcggtgaggcggat
ttcgatcttgatttcggagatctcttaacagcaggcgatggcgattcgaatgccgaggac
gatgaggacttcattgccaccgctcagcgcaagtccaacaggaaaagctcgaatgtgcag
ggcaagtcggtaaagaagggtggtggtttccaggccatgggcctcaatgcgaatttatta
cgagccatcacaaagaagggcttctctgtcccgactccaattcagaggaagacaatccct
ctggtcctggaaagaagagatgttgtgggtatggcgcgcacaggttcaggaaagacagcc
gccttcgtcatccccatgatcgagcgtttgaagggacacagccccaaggtcggcgccaga
gccttgattctctcgccgtctcgtgaactggcgctacagacattgaaggttgtgaaggaa
ctcggtcgcggcacagatctgaagacgattctcctcgttggtggtgacagcctggaggag
cagttcgcccagatggccacgaaccccgatatcgtcattgctacccctggtcgtttcctg
catttgaaggttgaaatgaacctcaacctctcctcgattaaatacgtggtcttcgacgaa
gccgatcgcctattcgaaatgggttttgccgagcagctaaccgagattcttcacgcgctg
ccatcatcaagacagactttgctattttcggctactctgccatcttccttggttgagttt
gccagagctggtttacaggagccgagcttggtgagattggacgctgagaccaaggtgtct
cccgatatggagagtgccttcttttctgtcaagggtggtgagaaggagggcgctctgtta
catattcttcacgatattattaagatgccaatgggaacgccagaaggagcaccaaaagac
gaggctgatccaaataactctcgggggaagcgcaagcgtggcagcgacagactcagtttc
aaggagaagccgacagcacactctacaatcatcttcacggctaccaagcatcacgtcgag
tacattgcacatctccttcgccacgccggcttcgctgtttcctacatttacggttctttg
gatcaaaccgctaggaagatccaagttgatgattttagacgaggaagaacgaacattctg
gtagtcacagacgttgcggctcgtggtatcgatattccagttctcgccaatgtcatcaac
tacgactttcctccacagcccaaggttttcgtccatcgtgtcggtcgtacggctcgtgct
ggccagcgcggttgggcttatgctcttgtacgggagtctgatctgccctatctcatcgat
cttcagctcttcctcggacggaggctggttatgggtaaagatggacaagacccctcattt
gctcaggatgttgtgctcggtgcgctgaagagatcggagctcgagaaccagactgagtgg
gtcaacaaggttctgaacgaagagggcgacatcagtgcgctcaggggtgttacgctcaag
gctgagaagctctatatgaggaccagaaactcggcttctagctccagtgccaagagagct
cgtgagatcatcaactcaaagggttggacacaacttcatcccttgtttggcgtggaggcg
atcaatgccgaggaagcccgtgacaatctcctctccaagatcagtttgttcaagcctcag
gagacagtcttcgaaattgggccccaaggaaagtcccacaggaacaaagcggcggaggtg
atgcgcagctttagaaccaaggtcgcgccacggaggatcacgaagggagaaaacgattct
gattttgccatgtcagatggcgagggacccaaggctggcagcgaatttgactcggattct
gacgatgaacccgcaaagcgggaggatgtgtcggagtcggagcaagaagaggacgactcg
gactctgaaatggaagtcacggttatttcgtccaagtcaagcaagaaacaaaagggtggt
gaccctatagcgtcattccaagaccccgagatttttatgtcctacacgccacgcacgact
tcggcggcagaagaaaaggcctatggcgtccactccggtggtgtcaactcatctcatttc
gtcaccgccgcccgcgacgctgccatggatctcaccaacgacgacggcgccaaggccttt
ggcttgcctacccgctccaaactccgctgggataagcgccacagcaaatacgtcgcccgt
gccaacgatgacgacggctccaagggcgtcaagatgatccgtggtgagtctggtgtcaag
attgcggcgtccttccagtccggcagattcgacaagtggaagaagtccaaccgtattggc
cgcctgcctggtgttggcgaattggaaaagcctggcctggccaggcttgccaacggtcct
ggccaccaggaaggtggcaccaggtataagcacaaacaagaaaaggcccccaaggaagct
gacaaattccgtgatgattatcatgtgaggaagaagcgggtggccgaagccaaggaaaag
aggattggcaagttcaaggacggggaaggctcgaagcgggagttgaagaacgctacggac
atcaggaaggcacgtgtcatcgctgaaaagaagagggaaaagaacgctaggcccagcaag
cgtcctaggaggtaa
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