KEGG   Podospora pseudocomata: QC762_603970
Entry
QC762_603970      CDS       T09797                                 
Symbol
ATG18
Name
(RefSeq) autophagy protein
  KO
K17908  autophagy-related protein 18
Organism
ppsd  Podospora pseudocomata
Pathway
ppsd04136  Autophagy - other
ppsd04138  Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:ppsd00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04138 Autophagy - yeast
    QC762_603970 (ATG18)
   04136 Autophagy - other
    QC762_603970 (ATG18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ppsd04131]
    QC762_603970 (ATG18)
   03029 Mitochondrial biogenesis [BR:ppsd03029]
    QC762_603970 (ATG18)
Membrane trafficking [BR:ppsd04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    QC762_603970 (ATG18)
Mitochondrial biogenesis [BR:ppsd03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    QC762_603970 (ATG18)
SSDB
Motif
Pfam: PROPPIN Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st BCAS3_WD40 ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_RSE1_2nd Beta-prop_WDR35_2nd Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st EIF3I Beta-prop_HPS5 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_DCAF12 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_VPS8 Beta-prop_Vps41 RYYR-CCHC Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_TEP1_2nd Beta-prop_NWD2_C Beta-prop_IFT140_2nd Hira WD40_Gbeta
Other DBs
NCBI-GeneID: 87911997
NCBI-ProteinID: XP_062740164
LinkDB
Position
6:complement(348481..>350323)
AA seq 448 aa
MSGGALNFVTFNQDHSCLAVGTSKGFRIYHTDPFSKIFNSDDGNVSIIEMLFSTSLVALV
LSPRHLVIQNTKRASVICELTFPNAILAVRLNRKRLAVVLEEEIYLYDISNMTLLQTINT
SPNPNAICALSPSSERCYIAYPLPKQREDTGERRPSHAPPLSSYIPTTSGEVLIYDTVKQ
VSINLIEAHRSPLCCIALNNDGTLLATASEKSTIIRVFAIPSGQRLYQFRRGTTPSTIYS
MSFNLSSTILCVSSVSNTVHIYKLTNNSQEGAEATSPRRNRFARSASINSADYVPNSDDD
SRRSSGAEEYGSTASQPSSEGSKALRNSGMFGNMIRRSSQIVGRGVVGAVGAYLPAAVSE
MFEPERDFASIKIPKPTSTVLQGAPAGGGGPIRSVVAMSSSSPQVMVVTSDGIFYVYNID
MEKGGEGYLVKQFSVVEADDKLDASYNA
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgtcgggcggcgccctgaacttcgtcacgttcaaccaggaccacagctgtctggctgtc
ggcacctccaagggcttccgcatctaccatacagaccccttttccaagatcttcaacagc
gatgacgggaatgtctccataatcgagatgctcttctcgacctcgctcgttgccctggtt
ctttcaccccgccatttggtgatccagaacacaaagcgggcctcggtcatttgcgaactc
accttccccaacgccatccttgccgtgcggctaaatcgaaaacggctggccgtggtgttg
gaagaggagatctatctttacgacatttccaacatgacacttttgcaaacaataaacacc
tcgccgaatccaaacgctatttgcgccctgtctccctcgtccgagagatgctacatagcc
tatccgcttcccaaacagcgagaggacacaggcgagagacggccatcgcatgcccccccc
ctgtccagttatattccgactaccagcggcgaggtactcatatatgatacggtgaagcag
gtctctatcaatctaatcgaggctcaccggtcgccgctgtgctgcatcgctctgaataac
gacggcactctccttgcgacggcgtcagaaaagagcaccattatccgcgtgtttgcgatt
cccagtggtcagaggctgtatcagttccggaggggtaccactccttcgaccatatacagc
atgtctttcaacctcagctcaaccatcctctgtgtttcgtccgtctccaacactgtccac
atctataaattgaccaacaattctcaagaaggcgccgaagcaacatcacctaggcgtaac
cgctttgcccggtctgccagtattaacagtgccgactatgttcccaacagcgacgacgac
tctcggcgaagcagtggggcggaagagtatggcagtaccgcgagccagcccagcagcgaa
ggaagcaaagctctgcggaacagcggcatgtttggcaatatgatcagacggtcatctcaa
attgtcgggcgtggtgtggtcggagcagtgggggcttatctaccagccgccgtgtctgag
atgttcgaacccgagcgtgatttcgcaagcatcaagattcctaaaccaaccagcacggta
ctgcaaggagcaccagctggcgggggcggacccatccgcagtgttgtggccatgagtagc
agttcgcctcaggtcatggtagtgacaagcgatggtatcttctatgtgtacaacattgac
atggaaaagggaggggagggttacttggtgaagcagttctctgtcgttgaggcggatgat
aagctggacgcctcatataacgcatag

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